RNA–Protein interactions for RNA: ENST00000359237.8

PLAC1-201, Transcript of placenta specific 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLAC1, Length 1,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLAC1-201ENST00000359237 AEBP2Q6ZN18 517 aaPredicted RBP25.61■■□□□ 1.69
PLAC1-201ENST00000359237 CHIC1Q5VXU3 224 aa24.17■■□□□ 1.46
PLAC1-201ENST00000359237 SENP3Q9H4L4 574 aaPredicted RBP22.19■■□□□ 1.14
PLAC1-201ENST00000359237 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
PLAC1-201ENST00000359237 FOXD1Q16676 465 aa20.65■□□□□ 0.9
PLAC1-201ENST00000359237 POTEDQ86YR6 584 aa20.61■□□□□ 0.89
PLAC1-201ENST00000359237 MSH5O43196 834 aa19.81■□□□□ 0.76
PLAC1-201ENST00000359237 PIAS4Q8N2W9 510 aaPredicted RBP19.21■□□□□ 0.67
PLAC1-201ENST00000359237 PLPPR3Q6T4P5 718 aa18.61■□□□□ 0.57
PLAC1-201ENST00000359237 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
PLAC1-201ENST00000359237 ADRA2BP18089 450 aa18.57■□□□□ 0.56
PLAC1-201ENST00000359237 CACNB1Q02641 598 aaPredicted RBP17.52■□□□□ 0.4
PLAC1-201ENST00000359237 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
PLAC1-201ENST00000359237 MAPK8IP2Q13387 824 aaPredicted RBP17.28■□□□□ 0.36
PLAC1-201ENST00000359237 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
PLAC1-201ENST00000359237 DCAF8L1A6NGE4 600 aa16.89■□□□□ 0.29
PLAC1-201ENST00000359237 RNF39Q9H2S5 420 aa16.72■□□□□ 0.27
PLAC1-201ENST00000359237 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
PLAC1-201ENST00000359237 HOXD11P31277 338 aaPredicted RBP16.41■□□□□ 0.22
PLAC1-201ENST00000359237 NISCHQ9Y2I1 1504 aa16.23■□□□□ 0.19
PLAC1-201ENST00000359237 PPP4R3CPQ6ZMV5 832 aa16.15■□□□□ 0.18
PLAC1-201ENST00000359237 RNF216Q9NWF9 866 aaPredicted RBP16.13■□□□□ 0.17
PLAC1-201ENST00000359237 CNKSR2Q8WXI2 1034 aa16.08■□□□□ 0.16
PLAC1-201ENST00000359237 DNAJC5BQ9UF47 199 aa16.06■□□□□ 0.16
PLAC1-201ENST00000359237 POTEHQ6S545 545 aa16.04■□□□□ 0.16
PLAC1-201ENST00000359237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.79■□□□□ 0.12
PLAC1-201ENST00000359237 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
PLAC1-201ENST00000359237 CAPN15O75808 1086 aa15.4■□□□□ 0.06
PLAC1-201ENST00000359237 DSG3P32926 999 aa15.37■□□□□ 0.05
PLAC1-201ENST00000359237 SPINK5Q9NQ38 1064 aaPredicted RBP15.23■□□□□ 0.03
PLAC1-201ENST00000359237 U3KPZ7 1027 aaPredicted RBP15.2■□□□□ 0.02
PLAC1-201ENST00000359237 NPM3O75607 178 aaKnown RBP15.02■□□□□ -0
PLAC1-201ENST00000359237 APLP2Q06481 763 aa14.97□□□□□ -0.01
PLAC1-201ENST00000359237 TRHP20396 242 aaPredicted RBP14.93□□□□□ -0.02
PLAC1-201ENST00000359237 ZNF219Q9P2Y4 722 aaPredicted RBP14.9□□□□□ -0.02
PLAC1-201ENST00000359237 ABCB7O75027 752 aa14.89□□□□□ -0.03
PLAC1-201ENST00000359237 RBM42Q9BTD8 480 aaKnown RBP14.86□□□□□ -0.03
PLAC1-201ENST00000359237 CHRDL2Q6WN34 429 aa14.76□□□□□ -0.05
PLAC1-201ENST00000359237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.7□□□□□ -0.06
PLAC1-201ENST00000359237 HNRNPUL2Q1KMD3 747 aaKnown RBP14.7□□□□□ -0.06
PLAC1-201ENST00000359237 SP7Q8TDD2 431 aaPredicted RBP14.66□□□□□ -0.06
PLAC1-201ENST00000359237 SAMD1Q6SPF0 538 aaPredicted RBP14.53□□□□□ -0.08
PLAC1-201ENST00000359237 SLC4A2P04920 1241 aa14.49□□□□□ -0.09
PLAC1-201ENST00000359237 CCDC180Q9P1Z9 1646 aa14.46□□□□□ -0.09
PLAC1-201ENST00000359237 POLA2Q14181 598 aa14.3□□□□□ -0.12
PLAC1-201ENST00000359237 HAX1O00165 279 aa14.27□□□□□ -0.13
PLAC1-201ENST00000359237 AKT1S1Q96B36 256 aa14.27□□□□□ -0.13
PLAC1-201ENST00000359237 ABCC9O60706 1549 aa14.19□□□□□ -0.14
PLAC1-201ENST00000359237 PIP4P2Q8N4L2 257 aa14.18□□□□□ -0.14
PLAC1-201ENST00000359237 REM2Q8IYK8 340 aaPredicted RBP14.08□□□□□ -0.16
PLAC1-201ENST00000359237 ZBTB12Q9Y330 459 aaPredicted RBP14.06□□□□□ -0.16
PLAC1-201ENST00000359237 MYCNP04198 464 aaPredicted RBP14□□□□□ -0.17
PLAC1-201ENST00000359237 KCNA4P22459 653 aa13.97□□□□□ -0.17
PLAC1-201ENST00000359237 FXR2P51116 673 aaKnown RBP eCLIP13.96□□□□□ -0.17
PLAC1-201ENST00000359237 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
PLAC1-201ENST00000359237 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
PLAC1-201ENST00000359237 EVX2Q03828 476 aa13.81□□□□□ -0.2
PLAC1-201ENST00000359237 LHX8Q68G74 356 aa13.76□□□□□ -0.21
PLAC1-201ENST00000359237 PLSCR2Q9NRY7 297 aa13.65□□□□□ -0.22
PLAC1-201ENST00000359237 DCAF8L2P0C7V8 631 aa13.63□□□□□ -0.23
PLAC1-201ENST00000359237 RB1CC1Q8TDY2 1594 aa13.62□□□□□ -0.23
PLAC1-201ENST00000359237 PRKAR2AP13861 404 aaKnown RBP13.62□□□□□ -0.23
PLAC1-201ENST00000359237 NACADO15069 1562 aa13.58□□□□□ -0.23
PLAC1-201ENST00000359237 GABBR2O75899 941 aa13.58□□□□□ -0.24
PLAC1-201ENST00000359237 ATF5Q9Y2D1 282 aaPredicted RBP13.58□□□□□ -0.24
PLAC1-201ENST00000359237 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
PLAC1-201ENST00000359237 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.25
PLAC1-201ENST00000359237 ZCCHC6Q5VYS8 1495 aaKnown RBP13.51□□□□□ -0.25
PLAC1-201ENST00000359237 SPDYE1Q8NFV5 336 aaPredicted RBP13.49□□□□□ -0.25
PLAC1-201ENST00000359237 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
PLAC1-201ENST00000359237 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
PLAC1-201ENST00000359237 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
PLAC1-201ENST00000359237 MYO15BQ96JP2 1530 aa13.45□□□□□ -0.26
PLAC1-201ENST00000359237 DCAF1Q9Y4B6 1507 aa13.4□□□□□ -0.26
PLAC1-201ENST00000359237 FOXD4L1Q9NU39 408 aa13.39□□□□□ -0.27
PLAC1-201ENST00000359237 FBLN2P98095 1184 aa13.37□□□□□ -0.27
PLAC1-201ENST00000359237 UNC13AQ9UPW8 1703 aa13.35□□□□□ -0.27
PLAC1-201ENST00000359237 PABPN1Q86U42 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
PLAC1-201ENST00000359237 CLCN6P51797 869 aa13.23□□□□□ -0.29
PLAC1-201ENST00000359237 CHADLQ6NUI6 762 aa13.23□□□□□ -0.29
PLAC1-201ENST00000359237 SCRIBQ14160 1630 aa13.22□□□□□ -0.29
PLAC1-201ENST00000359237 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
PLAC1-201ENST00000359237 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
PLAC1-201ENST00000359237 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
PLAC1-201ENST00000359237 DCBLD2Q96PD2 775 aa13.17□□□□□ -0.3
PLAC1-201ENST00000359237 POTEIP0CG38 1075 aa13.16□□□□□ -0.3
PLAC1-201ENST00000359237 CD44P16070 742 aaKnown RBP13.15□□□□□ -0.3
PLAC1-201ENST00000359237 SLC4A1APQ9BWU0 796 aaKnown RBP13.13□□□□□ -0.31
PLAC1-201ENST00000359237 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
PLAC1-201ENST00000359237 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
PLAC1-201ENST00000359237 SHROOM4Q9ULL8 1493 aa13.03□□□□□ -0.32
PLAC1-201ENST00000359237 POTEMA6NI47 508 aa13□□□□□ -0.33
PLAC1-201ENST00000359237 FARP1Q9Y4F1 1045 aaPredicted RBP12.99□□□□□ -0.33
PLAC1-201ENST00000359237 POTEGQ6S5H5 508 aa12.92□□□□□ -0.34
PLAC1-201ENST00000359237 PCDH10Q9P2E7 1040 aa12.92□□□□□ -0.34
PLAC1-201ENST00000359237 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
PLAC1-201ENST00000359237 OTUD5Q96G74 571 aa12.9□□□□□ -0.34
PLAC1-201ENST00000359237 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
PLAC1-201ENST00000359237 EIF4G1Q04637 1599 aaKnown RBP12.86□□□□□ -0.35
PLAC1-201ENST00000359237 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms