RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 NBPF8Q3BBV2 869 aa24.34■■□□□ 1.49
PTPA-206ENST00000358994 PRDM2Q13029 1718 aa24.33■■□□□ 1.49
PTPA-206ENST00000358994 SPATA31E1Q6ZUB1 1445 aa24.32■■□□□ 1.48
PTPA-206ENST00000358994 SENP3-EIF4A1A0A087X0R7 540 aa24.31■■□□□ 1.48
PTPA-206ENST00000358994 LRRIQ1Q96JM4 1722 aa24.3■■□□□ 1.48
PTPA-206ENST00000358994 CHIC2Q9UKJ5 165 aa24.3■■□□□ 1.48
PTPA-206ENST00000358994 GCC2Q8IWJ2 1684 aa24.3■■□□□ 1.48
PTPA-206ENST00000358994 KDM6BO15054 1643 aa24.3■■□□□ 1.48
PTPA-206ENST00000358994 MPHOSPH9Q99550 1183 aa24.29■■□□□ 1.48
PTPA-206ENST00000358994 DHX29Q7Z478 1369 aaKnown RBP24.29■■□□□ 1.48
PTPA-206ENST00000358994 FOXD1Q16676 465 aa24.28■■□□□ 1.48
PTPA-206ENST00000358994 PDE4AP27815 886 aa24.28■■□□□ 1.48
PTPA-206ENST00000358994 TCERG1O14776 1098 aaKnown RBP24.27■■□□□ 1.48
PTPA-206ENST00000358994 CNGB1Q14028 1251 aaPredicted RBP24.27■■□□□ 1.48
PTPA-206ENST00000358994 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
PTPA-206ENST00000358994 SUPT6HQ7KZ85 1726 aaKnown RBP24.25■■□□□ 1.47
PTPA-206ENST00000358994 UBE2Q2Q8WVN8 375 aa24.25■■□□□ 1.47
PTPA-206ENST00000358994 PPM1GO15355 546 aaPredicted RBP24.24■■□□□ 1.47
PTPA-206ENST00000358994 BACH2Q9BYV9 841 aa24.24■■□□□ 1.47
PTPA-206ENST00000358994 CTTNBP2Q8WZ74 1663 aa24.22■■□□□ 1.47
PTPA-206ENST00000358994 BRPF3Q9ULD4 1205 aa24.22■■□□□ 1.47
PTPA-206ENST00000358994 EXOC6Q8TAG9 804 aa24.21■■□□□ 1.47
PTPA-206ENST00000358994 TEX14Q8IWB6 1497 aa24.21■■□□□ 1.47
PTPA-206ENST00000358994 PNISRQ8TF01 805 aaKnown RBP24.2■■□□□ 1.46
PTPA-206ENST00000358994 RPRD2Q5VT52 1461 aaKnown RBP24.19■■□□□ 1.46
PTPA-206ENST00000358994 UGGT2Q9NYU1 1516 aa24.18■■□□□ 1.46
PTPA-206ENST00000358994 RRP1P56182 461 aaKnown RBP24.18■■□□□ 1.46
PTPA-206ENST00000358994 EHBP1L1Q8N3D4 1523 aa24.17■■□□□ 1.46
PTPA-206ENST00000358994 ANKRD30BQ9BXX2 1392 aa24.17■■□□□ 1.46
PTPA-206ENST00000358994 GRIN2BQ13224 1484 aa24.16■■□□□ 1.46
PTPA-206ENST00000358994 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
PTPA-206ENST00000358994 TCOF1Q13428 1488 aaKnown RBP24.15■■□□□ 1.46
PTPA-206ENST00000358994 MS4A1P11836 297 aa24.15■■□□□ 1.46
PTPA-206ENST00000358994 GSE1Q14687 1217 aa24.14■■□□□ 1.46
PTPA-206ENST00000358994 FANCD2Q9BXW9 1451 aa24.12■■□□□ 1.45
PTPA-206ENST00000358994 MIA2Q96PC5 1412 aa24.11■■□□□ 1.45
PTPA-206ENST00000358994 BCORL1Q5H9F3 1711 aa24.11■■□□□ 1.45
PTPA-206ENST00000358994 MAGI3Q5TCQ9 1506 aa24.11■■□□□ 1.45
PTPA-206ENST00000358994 POLR3GLQ9BT43 218 aa24.1■■□□□ 1.45
PTPA-206ENST00000358994 TMC1Q8TDI8 760 aa24.1■■□□□ 1.45
PTPA-206ENST00000358994 PDS5BQ9NTI5 1447 aa24.08■■□□□ 1.45
PTPA-206ENST00000358994 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.44
PTPA-206ENST00000358994 LAMC3Q9Y6N6 1575 aa24.08■■□□□ 1.44
PTPA-206ENST00000358994 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
PTPA-206ENST00000358994 SAMD9Q5K651 1589 aa24.07■■□□□ 1.44
PTPA-206ENST00000358994 CUL7Q14999 1698 aa24.07■■□□□ 1.44
PTPA-206ENST00000358994 KIF21AQ7Z4S6 1674 aa24.06■■□□□ 1.44
PTPA-206ENST00000358994 LRPPRCP42704 1394 aaKnown RBP24.06■■□□□ 1.44
PTPA-206ENST00000358994 NFKBIBQ15653 356 aa24.06■■□□□ 1.44
PTPA-206ENST00000358994 RCAN3Q9UKA8 241 aa24.06■■□□□ 1.44
PTPA-206ENST00000358994 ABCA10Q8WWZ4 1543 aa24.04■■□□□ 1.44
PTPA-206ENST00000358994 DDRGK1Q96HY6 314 aa24.04■■□□□ 1.44
PTPA-206ENST00000358994 FRAT1Q92837 279 aaPredicted RBP24.03■■□□□ 1.44
PTPA-206ENST00000358994 EIF5BO60841 1220 aaKnown RBP24.02■■□□□ 1.44
PTPA-206ENST00000358994 USP47Q96K76 1375 aa24.01■■□□□ 1.43
PTPA-206ENST00000358994 SKAP1Q86WV1 359 aa24■■□□□ 1.43
PTPA-206ENST00000358994 SLC4A3P48751 1232 aa23.97■■□□□ 1.43
PTPA-206ENST00000358994 ARID4BQ4LE39 1312 aaPredicted RBP23.96■■□□□ 1.43
PTPA-206ENST00000358994 SLC4A1APQ9BWU0 796 aaKnown RBP23.96■■□□□ 1.43
PTPA-206ENST00000358994 MBD5Q9P267 1494 aa23.94■■□□□ 1.42
PTPA-206ENST00000358994 BRD4O60885 1362 aaPredicted RBP23.94■■□□□ 1.42
PTPA-206ENST00000358994 KDM5CP41229 1560 aa23.93■■□□□ 1.42
PTPA-206ENST00000358994 POLA1P09884 1462 aaPredicted RBP23.93■■□□□ 1.42
PTPA-206ENST00000358994 KIF15Q9NS87 1388 aa23.92■■□□□ 1.42
PTPA-206ENST00000358994 MYBBP1AQ9BQG0 1328 aaKnown RBP23.91■■□□□ 1.42
PTPA-206ENST00000358994 ROCK2O75116 1388 aaKnown RBP23.91■■□□□ 1.42
PTPA-206ENST00000358994 ZNF326Q5BKZ1 582 aaKnown RBP23.9■■□□□ 1.42
PTPA-206ENST00000358994 PLIN1O60240 522 aa23.89■■□□□ 1.41
PTPA-206ENST00000358994 ROCK1Q13464 1354 aa23.88■■□□□ 1.41
PTPA-206ENST00000358994 DNMBPQ6XZF7 1577 aa23.88■■□□□ 1.41
PTPA-206ENST00000358994 PDE3BQ13370 1112 aa23.87■■□□□ 1.41
PTPA-206ENST00000358994 URB2Q14146 1524 aaKnown RBP23.87■■□□□ 1.41
PTPA-206ENST00000358994 CDCA7LQ96GN5 454 aa23.87■■□□□ 1.41
PTPA-206ENST00000358994 DAPK1P53355 1430 aa23.86■■□□□ 1.41
PTPA-206ENST00000358994 KIF14Q15058 1648 aa23.86■■□□□ 1.41
PTPA-206ENST00000358994 CRBNQ96SW2 442 aa23.86■■□□□ 1.41
PTPA-206ENST00000358994 RALBP1Q15311 655 aa23.85■■□□□ 1.41
PTPA-206ENST00000358994 RSPH6AQ9H0K4 717 aa23.84■■□□□ 1.41
PTPA-206ENST00000358994 TOPBP1Q92547 1522 aa23.83■■□□□ 1.41
PTPA-206ENST00000358994 DAXXQ9UER7 740 aaPredicted RBP23.83■■□□□ 1.41
PTPA-206ENST00000358994 FAM43AQ8N2R8 423 aa23.83■■□□□ 1.4
PTPA-206ENST00000358994 KTN1Q86UP2 1357 aaKnown RBP23.83■■□□□ 1.4
PTPA-206ENST00000358994 FRAT2O75474 233 aaPredicted RBP23.82■■□□□ 1.4
PTPA-206ENST00000358994 PZPP20742 1482 aa23.82■■□□□ 1.4
PTPA-206ENST00000358994 DCAF11Q8TEB1 546 aa23.82■■□□□ 1.4
PTPA-206ENST00000358994 ABCC5O15440 1437 aa23.81■■□□□ 1.4
PTPA-206ENST00000358994 EPRSP07814 1512 aaKnown RBP23.8■■□□□ 1.4
PTPA-206ENST00000358994 MRC2Q9UBG0 1479 aa23.8■■□□□ 1.4
PTPA-206ENST00000358994 CDK13Q14004 1512 aaKnown RBP23.78■■□□□ 1.4
PTPA-206ENST00000358994 DNMT1P26358 1616 aaKnown RBP23.78■■□□□ 1.4
PTPA-206ENST00000358994 KDM2BQ8NHM5 1336 aa23.77■■□□□ 1.4
PTPA-206ENST00000358994 C8orf34Q49A92 452 aa23.75■■□□□ 1.39
PTPA-206ENST00000358994 NLRP13Q86W25 1043 aa23.75■■□□□ 1.39
PTPA-206ENST00000358994 E9PCH4 1651 aa23.74■■□□□ 1.39
PTPA-206ENST00000358994 ZNF644Q9H582 1327 aaPredicted RBP23.74■■□□□ 1.39
PTPA-206ENST00000358994 CARD11Q9BXL7 1154 aa23.74■■□□□ 1.39
PTPA-206ENST00000358994 RALGAPBQ86X10 1494 aa23.74■■□□□ 1.39
PTPA-206ENST00000358994 C20orf194Q5TEA3 1177 aa23.73■■□□□ 1.39
PTPA-206ENST00000358994 KIAA1107Q9UPP5 1409 aa23.72■■□□□ 1.39
PTPA-206ENST00000358994 ST20-MTHFSA0A0A6YYL1 179 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms