RNA–Protein interactions for RNA: ENST00000358355.5

USP20-202, Transcript of ubiquitin specific peptidase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP20, Length 4,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP20-202ENST00000358355 UPF2Q9HAU5 1272 aaKnown RBP17.11■□□□□ 0.33
USP20-202ENST00000358355 ZBTB7CA1YPR0 619 aa17.11■□□□□ 0.33
USP20-202ENST00000358355 HDGFP51858 240 aaKnown RBP17.1■□□□□ 0.33
USP20-202ENST00000358355 GGT6Q6P531 493 aa17.1■□□□□ 0.33
USP20-202ENST00000358355 DCAF11Q8TEB1 546 aa17.09■□□□□ 0.33
USP20-202ENST00000358355 HAP1P54257 671 aaPredicted RBP17.07■□□□□ 0.32
USP20-202ENST00000358355 SETD5Q9C0A6 1442 aa17.07■□□□□ 0.32
USP20-202ENST00000358355 A0A0G2JS52 829 aa17.06■□□□□ 0.32
USP20-202ENST00000358355 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
USP20-202ENST00000358355 HNRNPMP52272 730 aaKnown RBP eCLIP17.06■□□□□ 0.32
USP20-202ENST00000358355 DNAJC5Q9H3Z4 198 aa17.05■□□□□ 0.32
USP20-202ENST00000358355 PPM1GO15355 546 aaPredicted RBP17.04■□□□□ 0.32
USP20-202ENST00000358355 PKD2Q13563 968 aa17.04■□□□□ 0.32
USP20-202ENST00000358355 IQGAP2Q13576 1575 aa17.03■□□□□ 0.32
USP20-202ENST00000358355 HSP90AA1P07900 732 aaKnown RBP17.03■□□□□ 0.32
USP20-202ENST00000358355 CUL7Q14999 1698 aa17.02■□□□□ 0.31
USP20-202ENST00000358355 RSPH4AQ5TD94 716 aa17.02■□□□□ 0.31
USP20-202ENST00000358355 TMF1P82094 1093 aa17.01■□□□□ 0.31
USP20-202ENST00000358355 NUDCQ9Y266 331 aa17.01■□□□□ 0.31
USP20-202ENST00000358355 ANKRD30AQ9BXX3 1397 aa17.01■□□□□ 0.31
USP20-202ENST00000358355 MYH16Q9H6N6 1097 aa17■□□□□ 0.31
USP20-202ENST00000358355 UACAQ9BZF9 1416 aa17■□□□□ 0.31
USP20-202ENST00000358355 TARBP1Q13395 1621 aaKnown RBP16.99■□□□□ 0.31
USP20-202ENST00000358355 LMOD2Q6P5Q4 547 aa16.98■□□□□ 0.31
USP20-202ENST00000358355 NUP155O75694 1391 aa16.98■□□□□ 0.31
USP20-202ENST00000358355 PLB1Q6P1J6 1458 aa16.97■□□□□ 0.31
USP20-202ENST00000358355 KIF21BO75037 1637 aa16.96■□□□□ 0.31
USP20-202ENST00000358355 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.3
USP20-202ENST00000358355 ADAMTS12P58397 1594 aa16.95■□□□□ 0.3
USP20-202ENST00000358355 MAPK8IP3Q9UPT6 1336 aa16.95■□□□□ 0.3
USP20-202ENST00000358355 KIF3BO15066 747 aa16.94■□□□□ 0.3
USP20-202ENST00000358355 MPHOSPH9Q99550 1183 aa16.94■□□□□ 0.3
USP20-202ENST00000358355 SPAG9O60271 1321 aaKnown RBP16.94■□□□□ 0.3
USP20-202ENST00000358355 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
USP20-202ENST00000358355 SRPK2P78362 688 aaKnown RBP16.91■□□□□ 0.3
USP20-202ENST00000358355 RAB3GAP2Q9H2M9 1393 aa16.91■□□□□ 0.3
USP20-202ENST00000358355 IRX6P78412 446 aaPredicted RBP16.91■□□□□ 0.3
USP20-202ENST00000358355 FOXD1Q16676 465 aa16.91■□□□□ 0.3
USP20-202ENST00000358355 NEUROD2Q15784 382 aa16.9■□□□□ 0.3
USP20-202ENST00000358355 TNNT2P45379 298 aaPredicted RBP16.9■□□□□ 0.3
USP20-202ENST00000358355 NUP160Q12769 1436 aa16.89■□□□□ 0.29
USP20-202ENST00000358355 CC2D1BQ5T0F9 858 aaKnown RBP16.88■□□□□ 0.29
USP20-202ENST00000358355 ABCA5Q8WWZ7 1642 aa16.88■□□□□ 0.29
USP20-202ENST00000358355 ZNF644Q9H582 1327 aaPredicted RBP16.88■□□□□ 0.29
USP20-202ENST00000358355 RAPGEF3O95398 923 aa16.87■□□□□ 0.29
USP20-202ENST00000358355 AFAP1Q8N556 730 aa16.87■□□□□ 0.29
USP20-202ENST00000358355 SAFB2Q14151 953 aaKnown RBP eCLIP16.87■□□□□ 0.29
USP20-202ENST00000358355 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
USP20-202ENST00000358355 PBRM1Q86U86 1689 aa16.86■□□□□ 0.29
USP20-202ENST00000358355 U2SURPO15042 1029 aaKnown RBP16.86■□□□□ 0.29
USP20-202ENST00000358355 SENP3-EIF4A1A0A087X0R7 540 aa16.85■□□□□ 0.29
USP20-202ENST00000358355 PNNQ9H307 717 aaKnown RBP16.85■□□□□ 0.29
USP20-202ENST00000358355 STK26Q9P289 416 aa16.84■□□□□ 0.29
USP20-202ENST00000358355 HSPA5P11021 654 aaKnown RBP16.84■□□□□ 0.29
USP20-202ENST00000358355 CASKIN1Q8WXD9 1431 aa16.83■□□□□ 0.29
USP20-202ENST00000358355 WASHC2CQ9Y4E1 1318 aa16.83■□□□□ 0.28
USP20-202ENST00000358355 EFCAB5A4FU69 1503 aa16.82■□□□□ 0.28
USP20-202ENST00000358355 FTSJ3Q8IY81 847 aaKnown RBP16.81■□□□□ 0.28
USP20-202ENST00000358355 LAS1LQ9Y4W2 734 aaKnown RBP16.81■□□□□ 0.28
USP20-202ENST00000358355 MORC1Q86VD1 984 aa16.81■□□□□ 0.28
USP20-202ENST00000358355 CDK13Q14004 1512 aaKnown RBP16.8■□□□□ 0.28
USP20-202ENST00000358355 ARXQ96QS3 562 aa16.8■□□□□ 0.28
USP20-202ENST00000358355 HDGFL2Q7Z4V5 671 aaPredicted RBP16.79■□□□□ 0.28
USP20-202ENST00000358355 CD109Q6YHK3 1445 aa16.78■□□□□ 0.28
USP20-202ENST00000358355 CEP170Q5SW79 1584 aa16.78■□□□□ 0.28
USP20-202ENST00000358355 ROCK2O75116 1388 aaKnown RBP16.78■□□□□ 0.28
USP20-202ENST00000358355 ANP32BQ92688 251 aaKnown RBP16.77■□□□□ 0.28
USP20-202ENST00000358355 SUPT16HQ9Y5B9 1047 aaKnown RBP16.77■□□□□ 0.27
USP20-202ENST00000358355 SOX12O15370 315 aa16.76■□□□□ 0.27
USP20-202ENST00000358355 L3MBTL2Q969R5 705 aa16.76■□□□□ 0.27
USP20-202ENST00000358355 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
USP20-202ENST00000358355 CHD1O14646 1710 aa16.75■□□□□ 0.27
USP20-202ENST00000358355 EID1Q9Y6B2 187 aa16.75■□□□□ 0.27
USP20-202ENST00000358355 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
USP20-202ENST00000358355 TROQ12816 1431 aaPredicted RBP16.74■□□□□ 0.27
USP20-202ENST00000358355 ASXL2Q76L83 1435 aa16.74■□□□□ 0.27
USP20-202ENST00000358355 CHMP4BQ9H444 224 aaKnown RBP16.74■□□□□ 0.27
USP20-202ENST00000358355 ARHGAP5Q13017 1502 aa16.73■□□□□ 0.27
USP20-202ENST00000358355 MS4A1P11836 297 aa16.73■□□□□ 0.27
USP20-202ENST00000358355 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
USP20-202ENST00000358355 EPRSP07814 1512 aaKnown RBP16.72■□□□□ 0.27
USP20-202ENST00000358355 FYCO1Q9BQS8 1478 aa16.71■□□□□ 0.27
USP20-202ENST00000358355 FRAT1Q92837 279 aaPredicted RBP16.71■□□□□ 0.27
USP20-202ENST00000358355 KTN1Q86UP2 1357 aaKnown RBP16.71■□□□□ 0.27
USP20-202ENST00000358355 EIF3AQ14152 1382 aaKnown RBP16.71■□□□□ 0.27
USP20-202ENST00000358355 SCAPERQ9BY12 1400 aa16.68■□□□□ 0.26
USP20-202ENST00000358355 UGGT2Q9NYU1 1516 aa16.67■□□□□ 0.26
USP20-202ENST00000358355 HECW1Q76N89 1606 aa16.66■□□□□ 0.26
USP20-202ENST00000358355 ATP10BO94823 1461 aa16.66■□□□□ 0.26
USP20-202ENST00000358355 NCOA2Q15596 1464 aa16.66■□□□□ 0.26
USP20-202ENST00000358355 DISP1Q96F81 1524 aa16.66■□□□□ 0.26
USP20-202ENST00000358355 TERF2IPQ9NYB0 399 aa16.66■□□□□ 0.26
USP20-202ENST00000358355 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
USP20-202ENST00000358355 RALBP1Q15311 655 aa16.66■□□□□ 0.26
USP20-202ENST00000358355 LRRC9Q6ZRR7 1453 aa16.65■□□□□ 0.26
USP20-202ENST00000358355 EIF5BO60841 1220 aaKnown RBP16.65■□□□□ 0.26
USP20-202ENST00000358355 PHLDB1Q86UU1 1377 aa16.65■□□□□ 0.26
USP20-202ENST00000358355 CCDC144AA2RUR9 1427 aa16.65■□□□□ 0.26
USP20-202ENST00000358355 KIAA0556O60303 1618 aa16.64■□□□□ 0.25
USP20-202ENST00000358355 BECN1Q14457 450 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms