RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 SYAP1Q96A49 352 aaPredicted RBP5.24□□□□□ -1.57
SYNE2-204ENST00000358025 ARHGAP35Q9NRY4 1499 aa5.24□□□□□ -1.57
SYNE2-204ENST00000358025 ABCC8Q09428 1581 aa5.23□□□□□ -1.57
SYNE2-204ENST00000358025 ARID3CA6NKF2 412 aa5.23□□□□□ -1.57
SYNE2-204ENST00000358025 ZNF326Q5BKZ1 582 aaKnown RBP5.23□□□□□ -1.57
SYNE2-204ENST00000358025 NRDCO43847 1150 aa5.23□□□□□ -1.57
SYNE2-204ENST00000358025 SOGA1O94964 1423 aa5.23□□□□□ -1.57
SYNE2-204ENST00000358025 RWDD1Q9H446 243 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-204ENST00000358025 MSNP26038 577 aaKnown RBP5.23□□□□□ -1.57
SYNE2-204ENST00000358025 UBE2Q2Q8WVN8 375 aa5.23□□□□□ -1.57
SYNE2-204ENST00000358025 CT47B1P0C2W7 299 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-204ENST00000358025 PRKRIP1Q9H875 184 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-204ENST00000358025 UACAQ9BZF9 1416 aa5.23□□□□□ -1.57
SYNE2-204ENST00000358025 CFAP53Q96M91 514 aa5.23□□□□□ -1.57
SYNE2-204ENST00000358025 ANKRD30AQ9BXX3 1397 aa5.22□□□□□ -1.57
SYNE2-204ENST00000358025 MRE11P49959 708 aa5.22□□□□□ -1.57
SYNE2-204ENST00000358025 SMG6Q86US8 1419 aaKnown RBP5.22□□□□□ -1.57
SYNE2-204ENST00000358025 PDE4AP27815 886 aa5.22□□□□□ -1.57
SYNE2-204ENST00000358025 CIZ1Q9ULV3 898 aaPredicted RBP5.22□□□□□ -1.57
SYNE2-204ENST00000358025 CUX2O14529 1486 aa5.22□□□□□ -1.57
SYNE2-204ENST00000358025 HSPA5P11021 654 aaKnown RBP5.22□□□□□ -1.57
SYNE2-204ENST00000358025 TMF1P82094 1093 aa5.22□□□□□ -1.57
SYNE2-204ENST00000358025 PDE3AQ14432 1141 aa5.22□□□□□ -1.57
SYNE2-204ENST00000358025 KLHL34Q8N239 644 aa5.22□□□□□ -1.57
SYNE2-204ENST00000358025 CHMP4CQ96CF2 233 aa5.22□□□□□ -1.57
SYNE2-204ENST00000358025 NAP1L5Q96NT1 182 aaPredicted RBP5.21□□□□□ -1.57
SYNE2-204ENST00000358025 CHMP5Q9NZZ3 219 aa5.21□□□□□ -1.58
SYNE2-204ENST00000358025 NINLQ9Y2I6 1382 aa5.21□□□□□ -1.58
SYNE2-204ENST00000358025 CGNL1Q0VF96 1302 aa5.21□□□□□ -1.58
SYNE2-204ENST00000358025 MCM5P33992 734 aa5.21□□□□□ -1.58
SYNE2-204ENST00000358025 HSCBQ8IWL3 235 aa5.21□□□□□ -1.58
SYNE2-204ENST00000358025 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.21□□□□□ -1.58
SYNE2-204ENST00000358025 HMGN5P82970 282 aaKnown RBP5.21□□□□□ -1.58
SYNE2-204ENST00000358025 MPHOSPH9Q99550 1183 aa5.21□□□□□ -1.58
SYNE2-204ENST00000358025 BACH2Q9BYV9 841 aa5.2□□□□□ -1.58
SYNE2-204ENST00000358025 TERF1P54274 439 aa5.2□□□□□ -1.58
SYNE2-204ENST00000358025 CNTLNQ9NXG0 1405 aa5.2□□□□□ -1.58
SYNE2-204ENST00000358025 KANK4Q5T7N3 995 aaPredicted RBP5.2□□□□□ -1.58
SYNE2-204ENST00000358025 ZNF428Q96B54 188 aa5.2□□□□□ -1.58
SYNE2-204ENST00000358025 CARD11Q9BXL7 1154 aa5.2□□□□□ -1.58
SYNE2-204ENST00000358025 ZMYM3Q14202 1370 aa5.2□□□□□ -1.58
SYNE2-204ENST00000358025 CECR2Q9BXF3 1484 aa5.19□□□□□ -1.58
SYNE2-204ENST00000358025 KIF16BQ96L93 1317 aa5.19□□□□□ -1.58
SYNE2-204ENST00000358025 GOLGA6L6A8MZA4 724 aa5.19□□□□□ -1.58
SYNE2-204ENST00000358025 NUCB2P80303 420 aa5.19□□□□□ -1.58
SYNE2-204ENST00000358025 E9PSI1 815 aa5.19□□□□□ -1.58
SYNE2-204ENST00000358025 HDAC5Q9UQL6 1122 aa5.19□□□□□ -1.58
SYNE2-204ENST00000358025 MYBBP1AQ9BQG0 1328 aaKnown RBP5.18□□□□□ -1.58
SYNE2-204ENST00000358025 RAPGEF2Q9Y4G8 1499 aa5.18□□□□□ -1.58
SYNE2-204ENST00000358025 PLEKHD1A6NEE1 506 aa5.18□□□□□ -1.58
SYNE2-204ENST00000358025 GOLGA2Q08379 1002 aa5.18□□□□□ -1.58
SYNE2-204ENST00000358025 NPM2Q86SE8 214 aaKnown RBP5.18□□□□□ -1.58
SYNE2-204ENST00000358025 HS1BP3Q53T59 392 aa5.18□□□□□ -1.58
SYNE2-204ENST00000358025 CWC22Q9HCG8 908 aaKnown RBP5.18□□□□□ -1.58
SYNE2-204ENST00000358025 KIAA2012Q0VF49 1180 aa5.18□□□□□ -1.58
SYNE2-204ENST00000358025 SIN3AQ96ST3 1273 aa5.18□□□□□ -1.58
SYNE2-204ENST00000358025 RRP1P56182 461 aaKnown RBP5.18□□□□□ -1.58
SYNE2-204ENST00000358025 DIAPH3Q9NSV4 1193 aa5.18□□□□□ -1.58
SYNE2-204ENST00000358025 CAVIN1Q6NZI2 390 aaKnown RBP5.17□□□□□ -1.58
SYNE2-204ENST00000358025 LETM1O95202 739 aaPredicted RBP5.17□□□□□ -1.58
SYNE2-204ENST00000358025 TPM3P06753 285 aa5.17□□□□□ -1.58
SYNE2-204ENST00000358025 NCBP3Q53F19 620 aaKnown RBP5.17□□□□□ -1.58
SYNE2-204ENST00000358025 L3MBTL2Q969R5 705 aa5.17□□□□□ -1.58
SYNE2-204ENST00000358025 A0A0G2JS52 829 aa5.17□□□□□ -1.58
SYNE2-204ENST00000358025 PTMAP06454 111 aaKnown RBP5.17□□□□□ -1.58
SYNE2-204ENST00000358025 PDCL2Q8N4E4 241 aa5.17□□□□□ -1.58
SYNE2-204ENST00000358025 NFKBIBQ15653 356 aa5.17□□□□□ -1.58
SYNE2-204ENST00000358025 PLEKHH2Q8IVE3 1493 aa5.16□□□□□ -1.58
SYNE2-204ENST00000358025 MCM2P49736 904 aa5.16□□□□□ -1.58
SYNE2-204ENST00000358025 AQRO60306 1485 aaKnown RBP eCLIP5.16□□□□□ -1.58
SYNE2-204ENST00000358025 CCDC7Q96M83 1385 aa5.16□□□□□ -1.58
SYNE2-204ENST00000358025 RNF123Q5XPI4 1314 aa5.16□□□□□ -1.58
SYNE2-204ENST00000358025 HTATSF1O43719 755 aaKnown RBP5.16□□□□□ -1.58
SYNE2-204ENST00000358025 PNISRQ8TF01 805 aaKnown RBP5.16□□□□□ -1.58
SYNE2-204ENST00000358025 PRXQ9BXM0 1461 aa5.16□□□□□ -1.58
SYNE2-204ENST00000358025 MCCP23508 829 aa5.15□□□□□ -1.58
SYNE2-204ENST00000358025 SENP3-EIF4A1A0A087X0R7 540 aa5.15□□□□□ -1.58
SYNE2-204ENST00000358025 ROCK1Q13464 1354 aa5.15□□□□□ -1.58
SYNE2-204ENST00000358025 PDCL3Q9H2J4 239 aa5.15□□□□□ -1.59
SYNE2-204ENST00000358025 FBLN2P98095 1184 aa5.15□□□□□ -1.59
SYNE2-204ENST00000358025 CFDP1Q9UEE9 299 aaPredicted RBP5.15□□□□□ -1.59
SYNE2-204ENST00000358025 ATP6V1DQ9Y5K8 247 aa5.15□□□□□ -1.59
SYNE2-204ENST00000358025 ST18O60284 1047 aa5.14□□□□□ -1.59
SYNE2-204ENST00000358025 HSP90AB1P08238 724 aaKnown RBP5.14□□□□□ -1.59
SYNE2-204ENST00000358025 CASKIN1Q8WXD9 1431 aa5.14□□□□□ -1.59
SYNE2-204ENST00000358025 RRP7BPQ9NSQ0 103 aa5.14□□□□□ -1.59
SYNE2-204ENST00000358025 HFM1A2PYH4 1435 aa5.14□□□□□ -1.59
SYNE2-204ENST00000358025 SMARCA4P51532 1647 aa5.14□□□□□ -1.59
SYNE2-204ENST00000358025 PABPN1Q86U42 306 aaKnown RBP eCLIP5.14□□□□□ -1.59
SYNE2-204ENST00000358025 ZBTB7CA1YPR0 619 aa5.14□□□□□ -1.59
SYNE2-204ENST00000358025 FTSJ3Q8IY81 847 aaKnown RBP5.13□□□□□ -1.59
SYNE2-204ENST00000358025 IGF1RP08069 1367 aa5.13□□□□□ -1.59
SYNE2-204ENST00000358025 DHX29Q7Z478 1369 aaKnown RBP5.13□□□□□ -1.59
SYNE2-204ENST00000358025 PKNOX2Q96KN3 472 aa5.13□□□□□ -1.59
SYNE2-204ENST00000358025 CCDC144AA2RUR9 1427 aa5.13□□□□□ -1.59
SYNE2-204ENST00000358025 P3H3Q8IVL6 736 aa5.12□□□□□ -1.59
SYNE2-204ENST00000358025 LRRC9Q6ZRR7 1453 aa5.12□□□□□ -1.59
SYNE2-204ENST00000358025 IRX6P78412 446 aaPredicted RBP5.12□□□□□ -1.59
SYNE2-204ENST00000358025 FAM184AQ8NB25 1140 aa5.12□□□□□ -1.59
SYNE2-204ENST00000358025 CCDC173Q0VFZ6 552 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms