RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 ADAMTS12P58397 1594 aa28.42■■■□□ 2.14
COL13A1-202ENST00000357811 FAM9BQ8IZU0 186 aa28.42■■■□□ 2.14
COL13A1-202ENST00000357811 WDR62O43379 1518 aa28.4■■■□□ 2.14
COL13A1-202ENST00000357811 MRC2Q9UBG0 1479 aa28.39■■■□□ 2.14
COL13A1-202ENST00000357811 MIA2Q96PC5 1412 aa28.37■■■□□ 2.13
COL13A1-202ENST00000357811 DAPK1P53355 1430 aa28.36■■■□□ 2.13
COL13A1-202ENST00000357811 SENP3-EIF4A1A0A087X0R7 540 aa28.35■■■□□ 2.13
COL13A1-202ENST00000357811 CFDP1Q9UEE9 299 aaPredicted RBP28.35■■■□□ 2.13
COL13A1-202ENST00000357811 ABCC5O15440 1437 aa28.34■■■□□ 2.13
COL13A1-202ENST00000357811 PRG4Q92954 1404 aaPredicted RBP28.33■■■□□ 2.13
COL13A1-202ENST00000357811 CHMP7Q8WUX9 453 aaPredicted RBP28.33■■■□□ 2.13
COL13A1-202ENST00000357811 GCC2Q8IWJ2 1684 aa28.33■■■□□ 2.13
COL13A1-202ENST00000357811 CDK11AQ9UQ88 783 aaPredicted RBP28.32■■■□□ 2.12
COL13A1-202ENST00000357811 NUP153P49790 1475 aaKnown RBP28.3■■■□□ 2.12
COL13A1-202ENST00000357811 DISP1Q96F81 1524 aa28.3■■■□□ 2.12
COL13A1-202ENST00000357811 ANKRD30BQ9BXX2 1392 aa28.3■■■□□ 2.12
COL13A1-202ENST00000357811 MRS2Q9HD23 443 aa28.29■■■□□ 2.12
COL13A1-202ENST00000357811 RBM19Q9Y4C8 960 aaKnown RBP28.26■■■□□ 2.11
COL13A1-202ENST00000357811 CCDC7Q96M83 1385 aa28.26■■■□□ 2.11
COL13A1-202ENST00000357811 PRKRIP1Q9H875 184 aaPredicted RBP28.26■■■□□ 2.11
COL13A1-202ENST00000357811 AKNAQ7Z591 1439 aa28.25■■■□□ 2.11
COL13A1-202ENST00000357811 KIAA0586Q9BVV6 1533 aa28.24■■■□□ 2.11
COL13A1-202ENST00000357811 PLB1Q6P1J6 1458 aa28.24■■■□□ 2.11
COL13A1-202ENST00000357811 CNTLNQ9NXG0 1405 aa28.23■■■□□ 2.11
COL13A1-202ENST00000357811 BCL11AQ9H165 835 aa28.23■■■□□ 2.11
COL13A1-202ENST00000357811 KIF7Q2M1P5 1343 aa28.22■■■□□ 2.11
COL13A1-202ENST00000357811 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
COL13A1-202ENST00000357811 KIAA0556O60303 1618 aa28.21■■■□□ 2.11
COL13A1-202ENST00000357811 PKD2Q13563 968 aa28.19■■■□□ 2.1
COL13A1-202ENST00000357811 RPRD2Q5VT52 1461 aaKnown RBP28.18■■■□□ 2.1
COL13A1-202ENST00000357811 GRIN2AQ12879 1464 aa28.18■■■□□ 2.1
COL13A1-202ENST00000357811 ROCK1Q13464 1354 aa28.16■■■□□ 2.1
COL13A1-202ENST00000357811 NCOA1Q15788 1441 aa28.16■■■□□ 2.1
COL13A1-202ENST00000357811 ANP32EQ9BTT0 268 aa28.15■■■□□ 2.1
COL13A1-202ENST00000357811 RAPGEF6Q8TEU7 1601 aa28.13■■■□□ 2.09
COL13A1-202ENST00000357811 JPH4Q96JJ6 628 aa28.13■■■□□ 2.09
COL13A1-202ENST00000357811 TEX14Q8IWB6 1497 aa28.13■■■□□ 2.09
COL13A1-202ENST00000357811 ERCC6Q03468 1493 aa28.12■■■□□ 2.09
COL13A1-202ENST00000357811 KDM2AQ9Y2K7 1162 aa28.12■■■□□ 2.09
COL13A1-202ENST00000357811 DNMT1P26358 1616 aaKnown RBP28.12■■■□□ 2.09
COL13A1-202ENST00000357811 CAMSAP2Q08AD1 1489 aa28.11■■■□□ 2.09
COL13A1-202ENST00000357811 TROQ12816 1431 aaPredicted RBP28.1■■■□□ 2.09
COL13A1-202ENST00000357811 EIF4G3O43432 1585 aaKnown RBP28.08■■■□□ 2.09
COL13A1-202ENST00000357811 PZPP20742 1482 aa28.06■■■□□ 2.08
COL13A1-202ENST00000357811 GPATCH8Q9UKJ3 1502 aaKnown RBP28.06■■■□□ 2.08
COL13A1-202ENST00000357811 KIF14Q15058 1648 aa28.05■■■□□ 2.08
COL13A1-202ENST00000357811 PLEKHD1A6NEE1 506 aa28.04■■■□□ 2.08
COL13A1-202ENST00000357811 B4GALNT3Q6L9W6 998 aa28.02■■■□□ 2.08
COL13A1-202ENST00000357811 HNRNPMP52272 730 aaKnown RBP eCLIP28.02■■■□□ 2.08
COL13A1-202ENST00000357811 SPATA31E1Q6ZUB1 1445 aa28.01■■■□□ 2.07
COL13A1-202ENST00000357811 NUP155O75694 1391 aa28■■■□□ 2.07
COL13A1-202ENST00000357811 USP47Q96K76 1375 aa28■■■□□ 2.07
COL13A1-202ENST00000357811 CEP170Q5SW79 1584 aa27.98■■■□□ 2.07
COL13A1-202ENST00000357811 ANKRD30AQ9BXX3 1397 aa27.97■■■□□ 2.07
COL13A1-202ENST00000357811 ANKRD50Q9ULJ7 1429 aa27.96■■■□□ 2.07
COL13A1-202ENST00000357811 KIAA1107Q9UPP5 1409 aa27.95■■■□□ 2.06
COL13A1-202ENST00000357811 CARD11Q9BXL7 1154 aa27.94■■■□□ 2.06
COL13A1-202ENST00000357811 TSPY4P0CV99 314 aa27.93■■■□□ 2.06
COL13A1-202ENST00000357811 TSPY10P0CW01 314 aa27.93■■■□□ 2.06
COL13A1-202ENST00000357811 CARMIL2Q6F5E8 1435 aa27.92■■■□□ 2.06
COL13A1-202ENST00000357811 DCAF11Q8TEB1 546 aa27.92■■■□□ 2.06
COL13A1-202ENST00000357811 ZBED9Q6R2W3 1325 aa27.92■■■□□ 2.06
COL13A1-202ENST00000357811 SYNJ2O15056 1496 aa27.9■■■□□ 2.06
COL13A1-202ENST00000357811 PPP4R2Q9NY27 417 aa27.88■■■□□ 2.05
COL13A1-202ENST00000357811 MSH5O43196 834 aa27.88■■■□□ 2.05
COL13A1-202ENST00000357811 RGL3Q3MIN7 710 aa27.87■■■□□ 2.05
COL13A1-202ENST00000357811 ST20-MTHFSA0A0A6YYL1 179 aa27.87■■■□□ 2.05
COL13A1-202ENST00000357811 MAGI1Q96QZ7 1491 aaPredicted RBP27.86■■■□□ 2.05
COL13A1-202ENST00000357811 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.86■■■□□ 2.05
COL13A1-202ENST00000357811 DHX29Q7Z478 1369 aaKnown RBP27.85■■■□□ 2.05
COL13A1-202ENST00000357811 C9orf84Q5VXU9 1444 aa27.84■■■□□ 2.05
COL13A1-202ENST00000357811 SALL2Q9Y467 1007 aaPredicted RBP27.83■■■□□ 2.05
COL13A1-202ENST00000357811 BCORL1Q5H9F3 1711 aa27.82■■■□□ 2.04
COL13A1-202ENST00000357811 ATP10BO94823 1461 aa27.82■■■□□ 2.04
COL13A1-202ENST00000357811 TMC1Q8TDI8 760 aa27.81■■■□□ 2.04
COL13A1-202ENST00000357811 ITSN2Q9NZM3 1697 aa27.79■■■□□ 2.04
COL13A1-202ENST00000357811 KIF15Q9NS87 1388 aa27.79■■■□□ 2.04
COL13A1-202ENST00000357811 MBD5Q9P267 1494 aa27.77■■■□□ 2.04
COL13A1-202ENST00000357811 ADGRL2O95490 1459 aa27.76■■■□□ 2.03
COL13A1-202ENST00000357811 ADGBQ8N7X0 1667 aa27.75■■■□□ 2.03
COL13A1-202ENST00000357811 NUP160Q12769 1436 aa27.73■■■□□ 2.03
COL13A1-202ENST00000357811 CDC42BPAQ5VT25 1732 aa27.69■■■□□ 2.02
COL13A1-202ENST00000357811 NBPF1Q3BBV0 1214 aa27.69■■■□□ 2.02
COL13A1-202ENST00000357811 PNISRQ8TF01 805 aaKnown RBP27.69■■■□□ 2.02
COL13A1-202ENST00000357811 ABCC10Q5T3U5 1492 aa27.69■■■□□ 2.02
COL13A1-202ENST00000357811 PTPRGP23470 1445 aa27.68■■■□□ 2.02
COL13A1-202ENST00000357811 ROCK2O75116 1388 aaKnown RBP27.68■■■□□ 2.02
COL13A1-202ENST00000357811 CROCC2H7BZ55 1655 aa27.67■■■□□ 2.02
COL13A1-202ENST00000357811 NUDCQ9Y266 331 aa27.66■■■□□ 2.02
COL13A1-202ENST00000357811 KDM5CP41229 1560 aa27.66■■■□□ 2.02
COL13A1-202ENST00000357811 ERICH6Q7L0X2 663 aa27.65■■■□□ 2.02
COL13A1-202ENST00000357811 ADCY10Q96PN6 1610 aa27.65■■■□□ 2.02
COL13A1-202ENST00000357811 ERICH6BQ5W0A0 696 aa27.65■■■□□ 2.02
COL13A1-202ENST00000357811 ABCA8O94911 1581 aa27.63■■■□□ 2.01
COL13A1-202ENST00000357811 POLR1AO95602 1720 aaPredicted RBP27.61■■■□□ 2.01
COL13A1-202ENST00000357811 CCDC136Q96JN2 1154 aa27.6■■■□□ 2.01
COL13A1-202ENST00000357811 RALGAPBQ86X10 1494 aa27.6■■■□□ 2.01
COL13A1-202ENST00000357811 SMG6Q86US8 1419 aaKnown RBP27.57■■■□□ 2
COL13A1-202ENST00000357811 CC2D1BQ5T0F9 858 aaKnown RBP27.57■■■□□ 2
COL13A1-202ENST00000357811 UHRF1BP1Q6BDS2 1440 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms