RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 MAGI1Q96QZ7 1491 aaPredicted RBP35.3■■■■□ 3.24
HDGF-201ENST00000357325 SYNJ2O15056 1496 aa35.28■■■■□ 3.24
HDGF-201ENST00000357325 ANP32CO43423 234 aa35.26■■■■□ 3.24
HDGF-201ENST00000357325 DNMT1P26358 1616 aaKnown RBP35.25■■■■□ 3.23
HDGF-201ENST00000357325 CDK11AQ9UQ88 783 aaPredicted RBP35.23■■■■□ 3.23
HDGF-201ENST00000357325 L3MBTL2Q969R5 705 aa35.22■■■■□ 3.23
HDGF-201ENST00000357325 HSPA5P11021 654 aaKnown RBP35.21■■■■□ 3.23
HDGF-201ENST00000357325 JPH4Q96JJ6 628 aa35.21■■■■□ 3.23
HDGF-201ENST00000357325 ROCK1Q13464 1354 aa35.2■■■■□ 3.23
HDGF-201ENST00000357325 TROQ12816 1431 aaPredicted RBP35.19■■■■□ 3.22
HDGF-201ENST00000357325 KIF14Q15058 1648 aa35.17■■■■□ 3.22
HDGF-201ENST00000357325 ZNF777Q9ULD5 760 aaPredicted RBP35.16■■■■□ 3.22
HDGF-201ENST00000357325 CCER2I3L3R5 266 aa35.16■■■■□ 3.22
HDGF-201ENST00000357325 CFDP1Q9UEE9 299 aaPredicted RBP35.15■■■■□ 3.22
HDGF-201ENST00000357325 WASHC2AQ641Q2 1341 aa35.13■■■■□ 3.21
HDGF-201ENST00000357325 CAMSAP2Q08AD1 1489 aa35.13■■■■□ 3.21
HDGF-201ENST00000357325 ANKRD30BQ9BXX2 1392 aa35.12■■■■□ 3.21
HDGF-201ENST00000357325 NUP160Q12769 1436 aa35.12■■■■□ 3.21
HDGF-201ENST00000357325 GPATCH8Q9UKJ3 1502 aaKnown RBP35.12■■■■□ 3.21
HDGF-201ENST00000357325 SLC4A1APQ9BWU0 796 aaKnown RBP35.09■■■■□ 3.21
HDGF-201ENST00000357325 NBPF8Q3BBV2 869 aa35.07■■■■□ 3.2
HDGF-201ENST00000357325 CARMIL2Q6F5E8 1435 aa35.05■■■■□ 3.2
HDGF-201ENST00000357325 C11orf95C9JLR9 678 aaPredicted RBP35.03■■■■□ 3.2
HDGF-201ENST00000357325 EIF4G2P78344 907 aaKnown RBP eCLIP35.02■■■■□ 3.2
HDGF-201ENST00000357325 RPRD2Q5VT52 1461 aaKnown RBP35.02■■■■□ 3.2
HDGF-201ENST00000357325 NCOA1Q15788 1441 aa35.01■■■■□ 3.19
HDGF-201ENST00000357325 PZPP20742 1482 aa34.98■■■■□ 3.19
HDGF-201ENST00000357325 TEX14Q8IWB6 1497 aa34.98■■■■□ 3.19
HDGF-201ENST00000357325 ITSN2Q9NZM3 1697 aa34.97■■■■□ 3.19
HDGF-201ENST00000357325 ADCY10Q96PN6 1610 aa34.97■■■■□ 3.19
HDGF-201ENST00000357325 BCANQ96GW7 911 aa34.96■■■■□ 3.19
HDGF-201ENST00000357325 ATP10BO94823 1461 aa34.92■■■■□ 3.18
HDGF-201ENST00000357325 ABCA8O94911 1581 aa34.91■■■■□ 3.18
HDGF-201ENST00000357325 PLEKHD1A6NEE1 506 aa34.9■■■■□ 3.18
HDGF-201ENST00000357325 FKBP8Q14318 412 aa34.9■■■■□ 3.18
HDGF-201ENST00000357325 ADGBQ8N7X0 1667 aa34.87■■■■□ 3.17
HDGF-201ENST00000357325 CROCC2H7BZ55 1655 aa34.87■■■■□ 3.17
HDGF-201ENST00000357325 CDC42BPAQ5VT25 1732 aa34.85■■■■□ 3.17
HDGF-201ENST00000357325 ADGRL2O95490 1459 aa34.84■■■■□ 3.17
HDGF-201ENST00000357325 ABCC10Q5T3U5 1492 aa34.84■■■■□ 3.17
HDGF-201ENST00000357325 CCDC184Q52MB2 194 aa34.82■■■■□ 3.17
HDGF-201ENST00000357325 PKD2Q13563 968 aa34.81■■■■□ 3.16
HDGF-201ENST00000357325 CCDC7Q96M83 1385 aa34.81■■■■□ 3.16
HDGF-201ENST00000357325 ANKRD30AQ9BXX3 1397 aa34.8■■■■□ 3.16
HDGF-201ENST00000357325 CNTLNQ9NXG0 1405 aa34.79■■■■□ 3.16
HDGF-201ENST00000357325 ANKRD50Q9ULJ7 1429 aa34.77■■■■□ 3.16
HDGF-201ENST00000357325 KIAA1107Q9UPP5 1409 aa34.76■■■■□ 3.15
HDGF-201ENST00000357325 SPATA31E1Q6ZUB1 1445 aa34.75■■■■□ 3.15
HDGF-201ENST00000357325 HNRNPMP52272 730 aaKnown RBP eCLIP34.74■■■■□ 3.15
HDGF-201ENST00000357325 HNRNPUQ00839 825 aaKnown RBP eCLIP34.73■■■■□ 3.15
HDGF-201ENST00000357325 ZNF326Q5BKZ1 582 aaKnown RBP34.73■■■■□ 3.15
HDGF-201ENST00000357325 C9orf84Q5VXU9 1444 aa34.72■■■■□ 3.15
HDGF-201ENST00000357325 KIF7Q2M1P5 1343 aa34.71■■■■□ 3.15
HDGF-201ENST00000357325 PTPRGP23470 1445 aa34.7■■■■□ 3.15
HDGF-201ENST00000357325 TSHZ2Q9NRE2 1034 aa34.67■■■■□ 3.14
HDGF-201ENST00000357325 NUP155O75694 1391 aa34.67■■■■□ 3.14
HDGF-201ENST00000357325 MBD5Q9P267 1494 aa34.66■■■■□ 3.14
HDGF-201ENST00000357325 PRKRIP1Q9H875 184 aaPredicted RBP34.65■■■■□ 3.14
HDGF-201ENST00000357325 TSPY4P0CV99 314 aa34.62■■■■□ 3.13
HDGF-201ENST00000357325 TSPY10P0CW01 314 aa34.62■■■■□ 3.13
HDGF-201ENST00000357325 SHANK2Q9UPX8 1470 aa34.59■■■■□ 3.13
HDGF-201ENST00000357325 CHD1O14646 1710 aa34.57■■■■□ 3.13
HDGF-201ENST00000357325 NEFLP07196 543 aa34.57■■■■□ 3.13
HDGF-201ENST00000357325 KIF15Q9NS87 1388 aa34.57■■■■□ 3.12
HDGF-201ENST00000357325 CNGB1Q14028 1251 aaPredicted RBP34.54■■■■□ 3.12
HDGF-201ENST00000357325 SAMD9LQ8IVG5 1584 aa34.53■■■■□ 3.12
HDGF-201ENST00000357325 CDC42BPBQ9Y5S2 1711 aa34.53■■■■□ 3.12
HDGF-201ENST00000357325 FAM9BQ8IZU0 186 aa34.52■■■■□ 3.12
HDGF-201ENST00000357325 USP47Q96K76 1375 aa34.52■■■■□ 3.12
HDGF-201ENST00000357325 BCORL1Q5H9F3 1711 aa34.52■■■■□ 3.12
HDGF-201ENST00000357325 POLR3GLQ9BT43 218 aa34.51■■■■□ 3.12
HDGF-201ENST00000357325 ERCC6L2Q5T890 1561 aa34.5■■■■□ 3.11
HDGF-201ENST00000357325 POLR1AO95602 1720 aaPredicted RBP34.49■■■■□ 3.11
HDGF-201ENST00000357325 MRS2Q9HD23 443 aa34.49■■■■□ 3.11
HDGF-201ENST00000357325 KDM2AQ9Y2K7 1162 aa34.47■■■■□ 3.11
HDGF-201ENST00000357325 ARHGEF5Q12774 1597 aa34.46■■■■□ 3.11
HDGF-201ENST00000357325 IRX6P78412 446 aaPredicted RBP34.46■■■■□ 3.11
HDGF-201ENST00000357325 PREX2Q70Z35 1606 aa34.44■■■■□ 3.1
HDGF-201ENST00000357325 KDM5DQ9BY66 1539 aa34.43■■■■□ 3.1
HDGF-201ENST00000357325 CCDC141Q6ZP82 1450 aa34.42■■■■□ 3.1
HDGF-201ENST00000357325 KDM5CP41229 1560 aa34.42■■■■□ 3.1
HDGF-201ENST00000357325 TTC37Q6PGP7 1564 aa34.41■■■■□ 3.1
HDGF-201ENST00000357325 DHX29Q7Z478 1369 aaKnown RBP34.39■■■■□ 3.1
HDGF-201ENST00000357325 SYCP2Q9BX26 1530 aa34.39■■■■□ 3.1
HDGF-201ENST00000357325 DCAF11Q8TEB1 546 aa34.37■■■■□ 3.09
HDGF-201ENST00000357325 UHRF1BP1Q6BDS2 1440 aa34.37■■■■□ 3.09
HDGF-201ENST00000357325 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.36■■■■□ 3.091e-6■■□□□ 11.8
HDGF-201ENST00000357325 SHROOM2Q13796 1616 aa34.35■■■■□ 3.09
HDGF-201ENST00000357325 CARD11Q9BXL7 1154 aa34.35■■■■□ 3.09
HDGF-201ENST00000357325 ARHGAP5Q13017 1502 aa34.33■■■■□ 3.09
HDGF-201ENST00000357325 RALGAPBQ86X10 1494 aa34.33■■■■□ 3.09
HDGF-201ENST00000357325 FAM135AQ9P2D6 1515 aa34.33■■■■□ 3.09
HDGF-201ENST00000357325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.3■■■■□ 3.086e-11■■□□□ 14.4
HDGF-201ENST00000357325 ARHGEF12Q9NZN5 1544 aa34.27■■■■□ 3.08
HDGF-201ENST00000357325 ST20-MTHFSA0A0A6YYL1 179 aa34.27■■■■□ 3.08
HDGF-201ENST00000357325 ABCC2Q92887 1545 aa34.24■■■■□ 3.07
HDGF-201ENST00000357325 RSPH4AQ5TD94 716 aa34.23■■■■□ 3.07
HDGF-201ENST00000357325 SENP3-EIF4A1A0A087X0R7 540 aa34.22■■■■□ 3.07
HDGF-201ENST00000357325 RGL3Q3MIN7 710 aa34.22■■■■□ 3.07
HDGF-201ENST00000357325 ZBED9Q6R2W3 1325 aa34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms