RNA–Protein interactions for RNA: ENST00000357302.8

CSF1-202, Transcript of colony stimulating factor 1, humanhuman

TSL 3

Gene CSF1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-202ENST00000357302 VPS8Q8N3P4 1428 aa31.99■■■□□ 2.71
CSF1-202ENST00000357302 PREX2Q70Z35 1606 aa31.97■■■□□ 2.71
CSF1-202ENST00000357302 SCAPERQ9BY12 1400 aa31.97■■■□□ 2.71
CSF1-202ENST00000357302 CDC42BPAQ5VT25 1732 aa31.96■■■□□ 2.71
CSF1-202ENST00000357302 KDM4FA0A1W2PPD8 638 aa31.95■■■□□ 2.71
CSF1-202ENST00000357302 EHBP1L1Q8N3D4 1523 aa31.9■■■□□ 2.7
CSF1-202ENST00000357302 POGZQ7Z3K3 1410 aa31.88■■■□□ 2.69
CSF1-202ENST00000357302 TIAM1Q13009 1591 aa31.86■■■□□ 2.69
CSF1-202ENST00000357302 ZMYM4Q5VZL5 1548 aa31.86■■■□□ 2.69
CSF1-202ENST00000357302 CCNB3Q8WWL7 1395 aa31.85■■■□□ 2.69
CSF1-202ENST00000357302 GPATCH8Q9UKJ3 1502 aaKnown RBP31.85■■■□□ 2.69
CSF1-202ENST00000357302 ARHGEF40Q8TER5 1519 aa31.83■■■□□ 2.69
CSF1-202ENST00000357302 ZNF777Q9ULD5 760 aaPredicted RBP31.82■■■□□ 2.68
CSF1-202ENST00000357302 ZFYVE16Q7Z3T8 1539 aa31.8■■■□□ 2.68
CSF1-202ENST00000357302 ZNF518AQ6AHZ1 1483 aa31.8■■■□□ 2.68
CSF1-202ENST00000357302 MAGI2Q86UL8 1455 aa31.8■■■□□ 2.68
CSF1-202ENST00000357302 ABCC1P33527 1531 aa31.79■■■□□ 2.68
CSF1-202ENST00000357302 SUPT6HQ7KZ85 1726 aaKnown RBP31.78■■■□□ 2.68
CSF1-202ENST00000357302 CFDP1Q9UEE9 299 aaPredicted RBP31.78■■■□□ 2.68
CSF1-202ENST00000357302 ITSN2Q9NZM3 1697 aa31.77■■■□□ 2.68
CSF1-202ENST00000357302 ARID4BQ4LE39 1312 aaPredicted RBP31.76■■■□□ 2.68
CSF1-202ENST00000357302 AFAP1Q8N556 730 aa31.76■■■□□ 2.67
CSF1-202ENST00000357302 YEATS2Q9ULM3 1422 aa31.75■■■□□ 2.67
CSF1-202ENST00000357302 SAMD9LQ8IVG5 1584 aa31.74■■■□□ 2.67
CSF1-202ENST00000357302 MYT1LQ9UL68 1186 aa31.74■■■□□ 2.67
CSF1-202ENST00000357302 MAP3K1Q13233 1512 aa31.73■■■□□ 2.67
CSF1-202ENST00000357302 LRRC9Q6ZRR7 1453 aa31.72■■■□□ 2.67
CSF1-202ENST00000357302 ARHGEF12Q9NZN5 1544 aa31.72■■■□□ 2.67
CSF1-202ENST00000357302 APLP2Q06481 763 aa31.72■■■□□ 2.67
CSF1-202ENST00000357302 KDM5CP41229 1560 aa31.72■■■□□ 2.67
CSF1-202ENST00000357302 NCOA2Q15596 1464 aa31.71■■■□□ 2.67
CSF1-202ENST00000357302 TRAPPC8Q9Y2L5 1435 aa31.69■■■□□ 2.66
CSF1-202ENST00000357302 HECW2Q9P2P5 1572 aa31.68■■■□□ 2.66
CSF1-202ENST00000357302 PLEKHH2Q8IVE3 1493 aa31.67■■■□□ 2.66
CSF1-202ENST00000357302 SYCP2Q9BX26 1530 aa31.66■■■□□ 2.66
CSF1-202ENST00000357302 HNRNPMP52272 730 aaKnown RBP eCLIP31.65■■■□□ 2.66
CSF1-202ENST00000357302 KANK4Q5T7N3 995 aaPredicted RBP31.65■■■□□ 2.66
CSF1-202ENST00000357302 ATP10AO60312 1499 aa31.65■■■□□ 2.66
CSF1-202ENST00000357302 BCORL1Q5H9F3 1711 aa31.64■■■□□ 2.66
CSF1-202ENST00000357302 KIAA1107Q9UPP5 1409 aa31.62■■■□□ 2.65
CSF1-202ENST00000357302 ADAMTSL3P82987 1691 aa31.61■■■□□ 2.65
CSF1-202ENST00000357302 MLH3Q9UHC1 1453 aa31.61■■■□□ 2.65
CSF1-202ENST00000357302 C9orf84Q5VXU9 1444 aa31.59■■■□□ 2.65
CSF1-202ENST00000357302 SIGLEC1Q9BZZ2 1709 aa31.59■■■□□ 2.65
CSF1-202ENST00000357302 ZNF644Q9H582 1327 aaPredicted RBP31.58■■■□□ 2.65
CSF1-202ENST00000357302 DIP2CQ9Y2E4 1556 aa31.56■■■□□ 2.64
CSF1-202ENST00000357302 KIDINS220Q9ULH0 1771 aa31.56■■■□□ 2.64
CSF1-202ENST00000357302 ABCA6Q8N139 1617 aa31.55■■■□□ 2.64
CSF1-202ENST00000357302 SPAG9O60271 1321 aaKnown RBP31.54■■■□□ 2.64
CSF1-202ENST00000357302 MADDQ8WXG6 1647 aa31.53■■■□□ 2.64
CSF1-202ENST00000357302 MLECQ14165 292 aa31.51■■■□□ 2.63
CSF1-202ENST00000357302 CAMSAP2Q08AD1 1489 aa31.49■■■□□ 2.63
CSF1-202ENST00000357302 REREQ9P2R6 1566 aa31.47■■■□□ 2.63
CSF1-202ENST00000357302 ATP7AQ04656 1500 aa31.46■■■□□ 2.63
CSF1-202ENST00000357302 RIMS1Q86UR5 1692 aaKnown RBP31.46■■■□□ 2.63
CSF1-202ENST00000357302 MBD5Q9P267 1494 aa31.46■■■□□ 2.63
CSF1-202ENST00000357302 PTPRMP28827 1452 aa31.45■■■□□ 2.62
CSF1-202ENST00000357302 INO80Q9ULG1 1556 aaPredicted RBP31.44■■■□□ 2.62
CSF1-202ENST00000357302 MYOM3Q5VTT5 1437 aa31.43■■■□□ 2.62
CSF1-202ENST00000357302 FER1L4A9Z1Z3 1794 aa31.43■■■□□ 2.62
CSF1-202ENST00000357302 RSPH4AQ5TD94 716 aa31.39■■■□□ 2.62
CSF1-202ENST00000357302 MIA2Q96PC5 1412 aa31.39■■■□□ 2.62
CSF1-202ENST00000357302 CCDC141Q6ZP82 1450 aa31.39■■■□□ 2.62
CSF1-202ENST00000357302 AGLP35573 1532 aa31.37■■■□□ 2.61
CSF1-202ENST00000357302 ARHGEF5Q12774 1597 aa31.35■■■□□ 2.61
CSF1-202ENST00000357302 ADGBQ8N7X0 1667 aa31.34■■■□□ 2.61
CSF1-202ENST00000357302 RTEL1-TNFRSF6BF6WH68 1400 aa31.33■■■□□ 2.61
CSF1-202ENST00000357302 PLPPR3Q6T4P5 718 aa31.32■■■□□ 2.6
CSF1-202ENST00000357302 TSPY4P0CV99 314 aa31.31■■■□□ 2.6
CSF1-202ENST00000357302 TSPY10P0CW01 314 aa31.31■■■□□ 2.6
CSF1-202ENST00000357302 A2MP01023 1474 aa31.31■■■□□ 2.6
CSF1-202ENST00000357302 ESF1Q9H501 851 aaKnown RBP31.27■■■□□ 2.6
CSF1-202ENST00000357302 PTPN23Q9H3S7 1636 aa31.27■■■□□ 2.6
CSF1-202ENST00000357302 PLXNC1O60486 1568 aa31.26■■■□□ 2.59
CSF1-202ENST00000357302 FGD6Q6ZV73 1430 aa31.24■■■□□ 2.59
CSF1-202ENST00000357302 DHX29Q7Z478 1369 aaKnown RBP31.18■■■□□ 2.58
CSF1-202ENST00000357302 MAST1Q9Y2H9 1570 aa31.17■■■□□ 2.58
CSF1-202ENST00000357302 CEBPAP49715 358 aaPredicted RBP31.15■■■□□ 2.58
CSF1-202ENST00000357302 GGT6Q6P531 493 aa31.15■■■□□ 2.58
CSF1-202ENST00000357302 TCOF1Q13428 1488 aaKnown RBP31.14■■■□□ 2.58
CSF1-202ENST00000357302 CNTLNQ9NXG0 1405 aa31.13■■■□□ 2.57
CSF1-202ENST00000357302 CROCC2H7BZ55 1655 aa31.13■■■□□ 2.57
CSF1-202ENST00000357302 C3P01024 1663 aa31.12■■■□□ 2.57
CSF1-202ENST00000357302 DNMT1P26358 1616 aaKnown RBP31.1■■■□□ 2.57
CSF1-202ENST00000357302 KIF3BO15066 747 aa31.1■■■□□ 2.57
CSF1-202ENST00000357302 PPARGC1BQ86YN6 1023 aaKnown RBP31.1■■■□□ 2.57
CSF1-202ENST00000357302 ABCC5O15440 1437 aa31.09■■■□□ 2.57
CSF1-202ENST00000357302 FAM50AQ14320 339 aaKnown RBP31.08■■■□□ 2.57
CSF1-202ENST00000357302 CLTCQ00610 1675 aaKnown RBP31.08■■■□□ 2.57
CSF1-202ENST00000357302 DAPK1P53355 1430 aa31.07■■■□□ 2.57
CSF1-202ENST00000357302 MROH2AA6NES4 1674 aa31.07■■■□□ 2.56
CSF1-202ENST00000357302 SHANK2Q9UPX8 1470 aa31.06■■■□□ 2.56
CSF1-202ENST00000357302 PPP6R1Q9UPN7 881 aa31.05■■■□□ 2.56
CSF1-202ENST00000357302 LMTK3Q96Q04 1460 aa31.04■■■□□ 2.56
CSF1-202ENST00000357302 SETD1BQ9UPS6 1966 aaKnown RBP31.03■■■□□ 2.56
CSF1-202ENST00000357302 PREX1Q8TCU6 1659 aa31.03■■■□□ 2.56
CSF1-202ENST00000357302 ZMYM3Q14202 1370 aa31■■■□□ 2.55
CSF1-202ENST00000357302 DUOX2Q9NRD8 1548 aa30.98■■■□□ 2.55
CSF1-202ENST00000357302 RRP7BPQ9NSQ0 103 aa30.98■■■□□ 2.55
CSF1-202ENST00000357302 CHIC2Q9UKJ5 165 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms