RNA–Protein interactions for RNA: ENST00000357302.8

CSF1-202, Transcript of colony stimulating factor 1, humanhuman

TSL 3

Gene CSF1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-202ENST00000357302 NISCHQ9Y2I1 1504 aa49.04■■■■■ 5.44
CSF1-202ENST00000357302 CCDC180Q9P1Z9 1646 aa43.7■■■■■ 4.59
CSF1-202ENST00000357302 ABCC9O60706 1549 aa42.92■■■■■ 4.46
CSF1-202ENST00000357302 RB1CC1Q8TDY2 1594 aa41.22■■■■■ 4.19
CSF1-202ENST00000357302 DCAF8L2P0C7V8 631 aa41.17■■■■■ 4.18
CSF1-202ENST00000357302 NACADO15069 1562 aa41.11■■■■■ 4.17
CSF1-202ENST00000357302 ZCCHC6Q5VYS8 1495 aaKnown RBP40.79■■■■■ 4.12
CSF1-202ENST00000357302 MYO15BQ96JP2 1530 aa40.75■■■■■ 4.11
CSF1-202ENST00000357302 DCAF1Q9Y4B6 1507 aa40.53■■■■■ 4.08
CSF1-202ENST00000357302 UNC13AQ9UPW8 1703 aa40.33■■■■■ 4.05
CSF1-202ENST00000357302 PABPN1Q86U42 306 aaKnown RBP eCLIP40.09■■■■■ 4.01
CSF1-202ENST00000357302 BICRAQ9NZM4 1560 aa39.93■■■■□ 3.98
CSF1-202ENST00000357302 SCRIBQ14160 1630 aa39.89■■■■□ 3.98
CSF1-202ENST00000357302 DNAJC5BQ9UF47 199 aa39.49■■■■□ 3.91
CSF1-202ENST00000357302 SHROOM4Q9ULL8 1493 aa39.47■■■■□ 3.91
CSF1-202ENST00000357302 EIF4G1Q04637 1599 aaKnown RBP38.91■■■■□ 3.82
CSF1-202ENST00000357302 CC2D2AQ9P2K1 1620 aa38.81■■■■□ 3.8
CSF1-202ENST00000357302 CECR2Q9BXF3 1484 aa38.57■■■■□ 3.76
CSF1-202ENST00000357302 SMARCA4P51532 1647 aa38.11■■■■□ 3.69
CSF1-202ENST00000357302 BAZ1AQ9NRL2 1556 aaPredicted RBP38.04■■■■□ 3.68
CSF1-202ENST00000357302 ATAD2BQ9ULI0 1458 aa37.91■■■■□ 3.66
CSF1-202ENST00000357302 NCAPD3P42695 1498 aa37.9■■■■□ 3.66
CSF1-202ENST00000357302 SMARCA2P51531 1590 aa37.89■■■■□ 3.66
CSF1-202ENST00000357302 MROH2BQ7Z745 1585 aa37.8■■■■□ 3.64
CSF1-202ENST00000357302 HMGXB3Q12766 1538 aa37.71■■■■□ 3.63
CSF1-202ENST00000357302 PEG3Q9GZU2 1588 aa37.69■■■■□ 3.62
CSF1-202ENST00000357302 BAZ1BQ9UIG0 1483 aaKnown RBP37.64■■■■□ 3.62
CSF1-202ENST00000357302 WIZO95785 1651 aa37.43■■■■□ 3.58
CSF1-202ENST00000357302 RSF1Q96T23 1441 aaPredicted RBP37.29■■■■□ 3.56
CSF1-202ENST00000357302 NESP48681 1621 aa37.08■■■■□ 3.53
CSF1-202ENST00000357302 ERCC6Q03468 1493 aa37.04■■■■□ 3.52
CSF1-202ENST00000357302 TOP2AP11388 1531 aaKnown RBP36.98■■■■□ 3.51
CSF1-202ENST00000357302 LAMC3Q9Y6N6 1575 aa36.97■■■■□ 3.51
CSF1-202ENST00000357302 CADPSQ9ULU8 1353 aa36.81■■■■□ 3.48
CSF1-202ENST00000357302 PDS5BQ9NTI5 1447 aa36.74■■■■□ 3.47
CSF1-202ENST00000357302 KIF21AQ7Z4S6 1674 aa36.69■■■■□ 3.46
CSF1-202ENST00000357302 CUX2O14529 1486 aa36.64■■■■□ 3.46
CSF1-202ENST00000357302 CCDC88BA6NC98 1476 aa36.55■■■■□ 3.44
CSF1-202ENST00000357302 CFTRP13569 1480 aa36.55■■■■□ 3.44
CSF1-202ENST00000357302 THOC2Q8NI27 1593 aaKnown RBP36.53■■■■□ 3.44
CSF1-202ENST00000357302 FANCD2Q9BXW9 1451 aa36.41■■■■□ 3.42
CSF1-202ENST00000357302 CEP164Q9UPV0 1460 aa36.39■■■■□ 3.42
CSF1-202ENST00000357302 PRDM2Q13029 1718 aa36.36■■■■□ 3.41
CSF1-202ENST00000357302 MRC2Q9UBG0 1479 aa36.36■■■■□ 3.41
CSF1-202ENST00000357302 SUPT5HO00267 1087 aaKnown RBP36.33■■■■□ 3.41
CSF1-202ENST00000357302 WDR62O43379 1518 aa36.22■■■■□ 3.39
CSF1-202ENST00000357302 URB2Q14146 1524 aaKnown RBP36.03■■■■□ 3.36
CSF1-202ENST00000357302 ABCC8Q09428 1581 aa35.81■■■■□ 3.32
CSF1-202ENST00000357302 TOPBP1Q92547 1522 aa35.8■■■■□ 3.32
CSF1-202ENST00000357302 DNMBPQ6XZF7 1577 aa35.76■■■■□ 3.31
CSF1-202ENST00000357302 DNAJC5Q9H3Z4 198 aa35.72■■■■□ 3.31
CSF1-202ENST00000357302 IFT140Q96RY7 1462 aa35.61■■■■□ 3.29
CSF1-202ENST00000357302 POLA1P09884 1462 aaPredicted RBP35.48■■■■□ 3.27
CSF1-202ENST00000357302 CUX1P39880 1505 aa35.47■■■■□ 3.27
CSF1-202ENST00000357302 ZNF608Q9ULD9 1512 aaPredicted RBP35.47■■■■□ 3.27
CSF1-202ENST00000357302 TARBP1Q13395 1621 aaKnown RBP35.43■■■■□ 3.26
CSF1-202ENST00000357302 FGD5Q6ZNL6 1462 aa35.39■■■■□ 3.26
CSF1-202ENST00000357302 SOGA1O94964 1423 aa35.36■■■■□ 3.25
CSF1-202ENST00000357302 EIF4G3O43432 1585 aaKnown RBP35.34■■■■□ 3.25
CSF1-202ENST00000357302 RAD54L2Q9Y4B4 1467 aa35.34■■■■□ 3.25
CSF1-202ENST00000357302 AQRO60306 1485 aaKnown RBP eCLIP35.27■■■■□ 3.24
CSF1-202ENST00000357302 WRNQ14191 1432 aaPredicted RBP eCLIP35.19■■■■□ 3.22
CSF1-202ENST00000357302 TDRD9Q8NDG6 1382 aaKnown RBP35.18■■■■□ 3.22
CSF1-202ENST00000357302 OSCARQ8IYS5 282 aa35.15■■■■□ 3.22
CSF1-202ENST00000357302 BIVM-ERCC5R4GMW8 1640 aa35.14■■■■□ 3.22
CSF1-202ENST00000357302 TOP2BQ02880 1626 aa35.14■■■■□ 3.22
CSF1-202ENST00000357302 WDR97A6NE52 1622 aa35.13■■■■□ 3.21
CSF1-202ENST00000357302 SYNJ1O43426 1573 aa35.12■■■■□ 3.21
CSF1-202ENST00000357302 ABCA10Q8WWZ4 1543 aa35.01■■■■□ 3.2
CSF1-202ENST00000357302 CHD1O14646 1710 aa34.98■■■■□ 3.19
CSF1-202ENST00000357302 GRIN2BQ13224 1484 aa34.96■■■■□ 3.19
CSF1-202ENST00000357302 FBLN2P98095 1184 aa34.95■■■■□ 3.19
CSF1-202ENST00000357302 GAPVD1Q14C86 1478 aa34.95■■■■□ 3.19
CSF1-202ENST00000357302 PBRM1Q86U86 1689 aa34.92■■■■□ 3.18
CSF1-202ENST00000357302 SNAPC4Q5SXM2 1469 aa34.92■■■■□ 3.18
CSF1-202ENST00000357302 ABCA5Q8WWZ7 1642 aa34.9■■■■□ 3.18
CSF1-202ENST00000357302 MAGI1Q96QZ7 1491 aaPredicted RBP34.87■■■■□ 3.17
CSF1-202ENST00000357302 CHMP7Q8WUX9 453 aaPredicted RBP34.8■■■■□ 3.16
CSF1-202ENST00000357302 SYNJ2O15056 1496 aa34.74■■■■□ 3.15
CSF1-202ENST00000357302 ERICH3Q5RHP9 1530 aa34.61■■■■□ 3.13
CSF1-202ENST00000357302 RIMBP3CA6NJZ7 1639 aa34.59■■■■□ 3.13
CSF1-202ENST00000357302 RIMBP3BA6NNM3 1639 aa34.59■■■■□ 3.13
CSF1-202ENST00000357302 RIMBP3Q9UFD9 1639 aa34.59■■■■□ 3.13
CSF1-202ENST00000357302 ADAMTS12P58397 1594 aa34.58■■■■□ 3.13
CSF1-202ENST00000357302 TRIM41Q8WV44 630 aa34.56■■■■□ 3.12
CSF1-202ENST00000357302 ARHGEF11O15085 1522 aa34.54■■■■□ 3.12
CSF1-202ENST00000357302 FHAD1B1AJZ9 1412 aa34.52■■■■□ 3.12
CSF1-202ENST00000357302 CLASP1Q7Z460 1538 aa34.51■■■■□ 3.12
CSF1-202ENST00000357302 GRIN2AQ12879 1464 aa34.5■■■■□ 3.11
CSF1-202ENST00000357302 KIF27Q86VH2 1401 aa34.48■■■■□ 3.11
CSF1-202ENST00000357302 IGF1RP08069 1367 aa34.34■■■■□ 3.09
CSF1-202ENST00000357302 CEP170Q5SW79 1584 aa34.33■■■■□ 3.09
CSF1-202ENST00000357302 NUP160Q12769 1436 aa34.32■■■■□ 3.08
CSF1-202ENST00000357302 CUL7Q14999 1698 aa34.31■■■■□ 3.08
CSF1-202ENST00000357302 CYB5RLQ6IPT4 315 aa34.28■■■■□ 3.08
CSF1-202ENST00000357302 ARAP1Q96P48 1450 aa34.24■■■■□ 3.07
CSF1-202ENST00000357302 CARMIL1Q5VZK9 1371 aa34.15■■■■□ 3.06
CSF1-202ENST00000357302 RUSC2Q8N2Y8 1516 aa34.11■■■■□ 3.05
CSF1-202ENST00000357302 SHROOM2Q13796 1616 aa34.11■■■■□ 3.05
CSF1-202ENST00000357302 ERCC6L2Q5T890 1561 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms