RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 MIA2Q96PC5 1412 aa8.52□□□□□ -1.05
TRIM38-201ENST00000357085 HIRIP3Q9BW71 556 aaPredicted RBP8.51□□□□□ -1.05
TRIM38-201ENST00000357085 CDCA8Q53HL2 280 aa8.51□□□□□ -1.05
TRIM38-201ENST00000357085 ARXQ96QS3 562 aa8.51□□□□□ -1.05
TRIM38-201ENST00000357085 SMG6Q86US8 1419 aaKnown RBP8.51□□□□□ -1.05
TRIM38-201ENST00000357085 HECW1Q76N89 1606 aa8.51□□□□□ -1.05
TRIM38-201ENST00000357085 CANXP27824 592 aaKnown RBP8.5□□□□□ -1.05
TRIM38-201ENST00000357085 BRPF3Q9ULD4 1205 aa8.5□□□□□ -1.05
TRIM38-201ENST00000357085 TMC1Q8TDI8 760 aa8.5□□□□□ -1.05
TRIM38-201ENST00000357085 MAP7D2Q96T17 732 aa8.5□□□□□ -1.05
TRIM38-201ENST00000357085 PRXQ9BXM0 1461 aa8.5□□□□□ -1.05
TRIM38-201ENST00000357085 CASKIN1Q8WXD9 1431 aa8.5□□□□□ -1.05
TRIM38-201ENST00000357085 UNC13AQ9UPW8 1703 aa8.5□□□□□ -1.05
TRIM38-201ENST00000357085 GCC2Q8IWJ2 1684 aa8.5□□□□□ -1.05
TRIM38-201ENST00000357085 ARAP1Q96P48 1450 aa8.49□□□□□ -1.05
TRIM38-201ENST00000357085 NUDCQ9Y266 331 aa8.49□□□□□ -1.05
TRIM38-201ENST00000357085 CTTNBP2Q8WZ74 1663 aa8.49□□□□□ -1.05
TRIM38-201ENST00000357085 RRP9O43818 475 aaKnown RBP8.49□□□□□ -1.05
TRIM38-201ENST00000357085 PAK3O75914 559 aaPredicted RBP8.49□□□□□ -1.05
TRIM38-201ENST00000357085 KIF15Q9NS87 1388 aa8.49□□□□□ -1.05
TRIM38-201ENST00000357085 PPP1R15AO75807 674 aaPredicted RBP8.48□□□□□ -1.05
TRIM38-201ENST00000357085 CCDC144AA2RUR9 1427 aa8.48□□□□□ -1.05
TRIM38-201ENST00000357085 C11orf95C9JLR9 678 aaPredicted RBP8.47□□□□□ -1.05
TRIM38-201ENST00000357085 ANKRD30AQ9BXX3 1397 aa8.47□□□□□ -1.05
TRIM38-201ENST00000357085 MYOM3Q5VTT5 1437 aa8.47□□□□□ -1.05
TRIM38-201ENST00000357085 FGD6Q6ZV73 1430 aa8.47□□□□□ -1.05
TRIM38-201ENST00000357085 ZMYM4Q5VZL5 1548 aa8.46□□□□□ -1.05
TRIM38-201ENST00000357085 ABCA5Q8WWZ7 1642 aa8.46□□□□□ -1.05
TRIM38-201ENST00000357085 SCAPERQ9BY12 1400 aa8.46□□□□□ -1.06
TRIM38-201ENST00000357085 MAPK8IP3Q9UPT6 1336 aa8.46□□□□□ -1.06
TRIM38-201ENST00000357085 WDR97A6NE52 1622 aa8.45□□□□□ -1.06
TRIM38-201ENST00000357085 DDX11L8A8MPP1 907 aa8.45□□□□□ -1.06
TRIM38-201ENST00000357085 INSRP06213 1382 aa8.45□□□□□ -1.06
TRIM38-201ENST00000357085 GOLGA6L3A6NEY3 463 aa8.45□□□□□ -1.06
TRIM38-201ENST00000357085 PDE4AP27815 886 aa8.43□□□□□ -1.06
TRIM38-201ENST00000357085 CDK11BP21127 795 aaKnown RBP8.43□□□□□ -1.06
TRIM38-201ENST00000357085 ITSN2Q9NZM3 1697 aa8.43□□□□□ -1.06
TRIM38-201ENST00000357085 BRD4O60885 1362 aaPredicted RBP8.43□□□□□ -1.06
TRIM38-201ENST00000357085 SIN3AQ96ST3 1273 aa8.43□□□□□ -1.06
TRIM38-201ENST00000357085 PTPN23Q9H3S7 1636 aa8.43□□□□□ -1.06
TRIM38-201ENST00000357085 SKOR2Q2VWA4 1001 aaPredicted RBP8.43□□□□□ -1.06
TRIM38-201ENST00000357085 FGD5Q6ZNL6 1462 aa8.42□□□□□ -1.06
TRIM38-201ENST00000357085 FRAT1Q92837 279 aaPredicted RBP8.42□□□□□ -1.06
TRIM38-201ENST00000357085 WASHC2AQ641Q2 1341 aa8.42□□□□□ -1.06
TRIM38-201ENST00000357085 WASHC2CQ9Y4E1 1318 aa8.42□□□□□ -1.06
TRIM38-201ENST00000357085 CARMIL1Q5VZK9 1371 aa8.42□□□□□ -1.06
TRIM38-201ENST00000357085 NCOA2Q15596 1464 aa8.42□□□□□ -1.06
TRIM38-201ENST00000357085 MAPKBP1O60336 1514 aa8.42□□□□□ -1.06
TRIM38-201ENST00000357085 GBP4Q96PP9 640 aa8.41□□□□□ -1.06
TRIM38-201ENST00000357085 NFKBIBQ15653 356 aa8.41□□□□□ -1.06
TRIM38-201ENST00000357085 ZNF326Q5BKZ1 582 aaKnown RBP8.41□□□□□ -1.06
TRIM38-201ENST00000357085 TPM2P07951 284 aa8.41□□□□□ -1.06
TRIM38-201ENST00000357085 CENPQQ7L2Z9 268 aaPredicted RBP8.41□□□□□ -1.06
TRIM38-201ENST00000357085 ATAD2BQ9ULI0 1458 aa8.41□□□□□ -1.06
TRIM38-201ENST00000357085 MSNP26038 577 aaKnown RBP8.4□□□□□ -1.06
TRIM38-201ENST00000357085 CHAF1AQ13111 956 aaPredicted RBP8.4□□□□□ -1.07
TRIM38-201ENST00000357085 TAF3Q5VWG9 929 aa8.4□□□□□ -1.07
TRIM38-201ENST00000357085 ZMYND15Q9H091 742 aa8.4□□□□□ -1.07
TRIM38-201ENST00000357085 WDR43Q15061 677 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRIM38-201ENST00000357085 ARHGEF12Q9NZN5 1544 aa8.39□□□□□ -1.07
TRIM38-201ENST00000357085 MYBBP1AQ9BQG0 1328 aaKnown RBP8.38□□□□□ -1.07
TRIM38-201ENST00000357085 A0A0U1RQG5 324 aaPredicted RBP8.38□□□□□ -1.07
TRIM38-201ENST00000357085 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.38□□□□□ -1.07
TRIM38-201ENST00000357085 KIF14Q15058 1648 aa8.38□□□□□ -1.07
TRIM38-201ENST00000357085 NLRP13Q86W25 1043 aa8.38□□□□□ -1.07
TRIM38-201ENST00000357085 ADGBQ8N7X0 1667 aa8.38□□□□□ -1.07
TRIM38-201ENST00000357085 PCF11O94913 1555 aaKnown RBP8.38□□□□□ -1.07
TRIM38-201ENST00000357085 ZMYM3Q14202 1370 aa8.37□□□□□ -1.07
TRIM38-201ENST00000357085 CSPP1Q1MSJ5 1256 aa8.37□□□□□ -1.07
TRIM38-201ENST00000357085 EIF2AK4Q9P2K8 1649 aaKnown RBP8.37□□□□□ -1.07
TRIM38-201ENST00000357085 RCAN3Q9UKA8 241 aa8.37□□□□□ -1.07
TRIM38-201ENST00000357085 FAM161AQ3B820 660 aa8.37□□□□□ -1.07
TRIM38-201ENST00000357085 CCDC7Q96M83 1385 aa8.36□□□□□ -1.07
TRIM38-201ENST00000357085 ROCK1Q13464 1354 aa8.36□□□□□ -1.07
TRIM38-201ENST00000357085 MYH16Q9H6N6 1097 aa8.36□□□□□ -1.07
TRIM38-201ENST00000357085 PRKRIP1Q9H875 184 aaPredicted RBP8.36□□□□□ -1.07
TRIM38-201ENST00000357085 HSCBQ8IWL3 235 aa8.36□□□□□ -1.07
TRIM38-201ENST00000357085 CGNL1Q0VF96 1302 aa8.36□□□□□ -1.07
TRIM38-201ENST00000357085 CASC1Q6TDU7 716 aa8.36□□□□□ -1.07
TRIM38-201ENST00000357085 HSPA5P11021 654 aaKnown RBP8.35□□□□□ -1.07
TRIM38-201ENST00000357085 SYAP1Q96A49 352 aaPredicted RBP8.35□□□□□ -1.07
TRIM38-201ENST00000357085 RRP1P56182 461 aaKnown RBP8.34□□□□□ -1.08
TRIM38-201ENST00000357085 RGS3P49796 1198 aa8.33□□□□□ -1.08
TRIM38-201ENST00000357085 PHF14O94880 888 aa8.33□□□□□ -1.08
TRIM38-201ENST00000357085 KANK4Q5T7N3 995 aaPredicted RBP8.33□□□□□ -1.08
TRIM38-201ENST00000357085 NCOA1Q15788 1441 aa8.33□□□□□ -1.08
TRIM38-201ENST00000357085 STAC3Q96MF2 364 aa8.32□□□□□ -1.08
TRIM38-201ENST00000357085 CFTRP13569 1480 aa8.32□□□□□ -1.08
TRIM38-201ENST00000357085 USP47Q96K76 1375 aa8.32□□□□□ -1.08
TRIM38-201ENST00000357085 DNMBPQ6XZF7 1577 aa8.32□□□□□ -1.08
TRIM38-201ENST00000357085 NESP48681 1621 aa8.32□□□□□ -1.08
TRIM38-201ENST00000357085 VIRMAQ69YN4 1812 aaKnown RBP8.31□□□□□ -1.08
TRIM38-201ENST00000357085 GOLGA6L6A8MZA4 724 aa8.31□□□□□ -1.08
TRIM38-201ENST00000357085 NCAPD3P42695 1498 aa8.31□□□□□ -1.08
TRIM38-201ENST00000357085 BACH2Q9BYV9 841 aa8.31□□□□□ -1.08
TRIM38-201ENST00000357085 SLKQ9H2G2 1235 aaPredicted RBP8.31□□□□□ -1.08
TRIM38-201ENST00000357085 CAMSAP2Q08AD1 1489 aa8.31□□□□□ -1.08
TRIM38-201ENST00000357085 KIF16BQ96L93 1317 aa8.31□□□□□ -1.08
TRIM38-201ENST00000357085 KNSTRNQ9Y448 316 aa8.3□□□□□ -1.08
TRIM38-201ENST00000357085 PMFBP1Q8TBY8 1022 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms