RNA–Protein interactions for RNA: ENST00000354412.7

LRP8-203, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-203ENST00000354412 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
LRP8-203ENST00000354412 MAGI3Q5TCQ9 1506 aa19.03■□□□□ 0.64
LRP8-203ENST00000354412 DISP1Q96F81 1524 aa19.02■□□□□ 0.64
LRP8-203ENST00000354412 PTPRKQ15262 1439 aa19.01■□□□□ 0.63
LRP8-203ENST00000354412 KDM5BQ9UGL1 1544 aa19.01■□□□□ 0.63
LRP8-203ENST00000354412 CNTLNQ9NXG0 1405 aa19■□□□□ 0.63
LRP8-203ENST00000354412 ZBED9Q6R2W3 1325 aa19■□□□□ 0.63
LRP8-203ENST00000354412 TCOF1Q13428 1488 aaKnown RBP19■□□□□ 0.63
LRP8-203ENST00000354412 RAPGEF6Q8TEU7 1601 aa18.98■□□□□ 0.63
LRP8-203ENST00000354412 CEP170Q5SW79 1584 aa18.97■□□□□ 0.63
LRP8-203ENST00000354412 PRKRIP1Q9H875 184 aaPredicted RBP18.96■□□□□ 0.63
LRP8-203ENST00000354412 CDK13Q14004 1512 aaKnown RBP18.94■□□□□ 0.62
LRP8-203ENST00000354412 DEKP35659 375 aaKnown RBP18.94■□□□□ 0.62
LRP8-203ENST00000354412 MIA2Q96PC5 1412 aa18.94■□□□□ 0.62
LRP8-203ENST00000354412 MRS2Q9HD23 443 aa18.94■□□□□ 0.62
LRP8-203ENST00000354412 B4GALNT3Q6L9W6 998 aa18.93■□□□□ 0.62
LRP8-203ENST00000354412 FAM9BQ8IZU0 186 aa18.93■□□□□ 0.62
LRP8-203ENST00000354412 NUP160Q12769 1436 aa18.93■□□□□ 0.62
LRP8-203ENST00000354412 NOP58Q9Y2X3 529 aaKnown RBP18.92■□□□□ 0.62
LRP8-203ENST00000354412 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
LRP8-203ENST00000354412 AKNAQ7Z591 1439 aa18.91■□□□□ 0.62
LRP8-203ENST00000354412 CCDC7Q96M83 1385 aa18.9■□□□□ 0.62
LRP8-203ENST00000354412 NUP153P49790 1475 aaKnown RBP18.9■□□□□ 0.62
LRP8-203ENST00000354412 NCOA1Q15788 1441 aa18.9■□□□□ 0.62
LRP8-203ENST00000354412 CCDC184Q52MB2 194 aa18.89■□□□□ 0.62
LRP8-203ENST00000354412 CARMIL2Q6F5E8 1435 aa18.86■□□□□ 0.61
LRP8-203ENST00000354412 RRP7BPQ9NSQ0 103 aa18.85■□□□□ 0.61
LRP8-203ENST00000354412 L3MBTL2Q969R5 705 aa18.84■□□□□ 0.61
LRP8-203ENST00000354412 MPHOSPH9Q99550 1183 aa18.84■□□□□ 0.61
LRP8-203ENST00000354412 ADCY10Q96PN6 1610 aa18.83■□□□□ 0.61
LRP8-203ENST00000354412 ITSN2Q9NZM3 1697 aa18.82■□□□□ 0.6
LRP8-203ENST00000354412 ANP32AP39687 249 aaKnown RBP18.82■□□□□ 0.6
LRP8-203ENST00000354412 SMG6Q86US8 1419 aaKnown RBP18.82■□□□□ 0.6
LRP8-203ENST00000354412 C11orf95C9JLR9 678 aaPredicted RBP18.81■□□□□ 0.6
LRP8-203ENST00000354412 JPH4Q96JJ6 628 aa18.81■□□□□ 0.6
LRP8-203ENST00000354412 DENND4BO75064 1496 aaPredicted RBP18.8■□□□□ 0.6
LRP8-203ENST00000354412 CHIC2Q9UKJ5 165 aa18.8■□□□□ 0.6
LRP8-203ENST00000354412 DNMT1P26358 1616 aaKnown RBP18.79■□□□□ 0.6
LRP8-203ENST00000354412 CCDC136Q96JN2 1154 aa18.78■□□□□ 0.6
LRP8-203ENST00000354412 IPO9Q96P70 1041 aaKnown RBP18.78■□□□□ 0.6
LRP8-203ENST00000354412 TROQ12816 1431 aaPredicted RBP18.78■□□□□ 0.6
LRP8-203ENST00000354412 NBR1Q14596 966 aa18.76■□□□□ 0.59
LRP8-203ENST00000354412 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
LRP8-203ENST00000354412 KIF7Q2M1P5 1343 aa18.76■□□□□ 0.59
LRP8-203ENST00000354412 RNF123Q5XPI4 1314 aa18.76■□□□□ 0.59
LRP8-203ENST00000354412 ABCA8O94911 1581 aa18.75■□□□□ 0.59
LRP8-203ENST00000354412 RTL5Q5HYW3 569 aaPredicted RBP18.75■□□□□ 0.59
LRP8-203ENST00000354412 PLB1Q6P1J6 1458 aa18.75■□□□□ 0.59
LRP8-203ENST00000354412 ROCK1Q13464 1354 aa18.74■□□□□ 0.59
LRP8-203ENST00000354412 PAK3O75914 559 aaPredicted RBP18.74■□□□□ 0.59
LRP8-203ENST00000354412 ZBTB47Q9UFB7 747 aaPredicted RBP18.74■□□□□ 0.59
LRP8-203ENST00000354412 CHD1O14646 1710 aa18.73■□□□□ 0.59
LRP8-203ENST00000354412 SPATA31E1Q6ZUB1 1445 aa18.73■□□□□ 0.59
LRP8-203ENST00000354412 RPRD2Q5VT52 1461 aaKnown RBP18.73■□□□□ 0.59
LRP8-203ENST00000354412 DAPK1P53355 1430 aa18.72■□□□□ 0.59
LRP8-203ENST00000354412 ANKRD30BQ9BXX2 1392 aa18.71■□□□□ 0.59
LRP8-203ENST00000354412 NBPF8Q3BBV2 869 aa18.7■□□□□ 0.58
LRP8-203ENST00000354412 ADGBQ8N7X0 1667 aa18.7■□□□□ 0.58
LRP8-203ENST00000354412 POLR1AO95602 1720 aaPredicted RBP18.68■□□□□ 0.58
LRP8-203ENST00000354412 CROCC2H7BZ55 1655 aa18.68■□□□□ 0.58
LRP8-203ENST00000354412 KIF14Q15058 1648 aa18.67■□□□□ 0.58
LRP8-203ENST00000354412 PRG4Q92954 1404 aaPredicted RBP18.66■□□□□ 0.58
LRP8-203ENST00000354412 ARID4BQ4LE39 1312 aaPredicted RBP18.66■□□□□ 0.58
LRP8-203ENST00000354412 FOXD1Q16676 465 aa18.66■□□□□ 0.58
LRP8-203ENST00000354412 TEX14Q8IWB6 1497 aa18.66■□□□□ 0.58
LRP8-203ENST00000354412 ABCC5O15440 1437 aa18.66■□□□□ 0.58
LRP8-203ENST00000354412 KDM6BO15054 1643 aa18.66■□□□□ 0.58
LRP8-203ENST00000354412 CAMSAP2Q08AD1 1489 aa18.65■□□□□ 0.58
LRP8-203ENST00000354412 SHROOM2Q13796 1616 aa18.65■□□□□ 0.58
LRP8-203ENST00000354412 GPATCH8Q9UKJ3 1502 aaKnown RBP18.64■□□□□ 0.57
LRP8-203ENST00000354412 ZNF644Q9H582 1327 aaPredicted RBP18.63■□□□□ 0.57
LRP8-203ENST00000354412 DHX29Q7Z478 1369 aaKnown RBP18.63■□□□□ 0.57
LRP8-203ENST00000354412 SLC4A1APQ9BWU0 796 aaKnown RBP18.62■□□□□ 0.57
LRP8-203ENST00000354412 CDC42BPAQ5VT25 1732 aa18.62■□□□□ 0.57
LRP8-203ENST00000354412 ADGRL2O95490 1459 aa18.6■□□□□ 0.57
LRP8-203ENST00000354412 ATP10BO94823 1461 aa18.59■□□□□ 0.57
LRP8-203ENST00000354412 ROCK2O75116 1388 aaKnown RBP18.59■□□□□ 0.57
LRP8-203ENST00000354412 ABCC10Q5T3U5 1492 aa18.58■□□□□ 0.57
LRP8-203ENST00000354412 TMC1Q8TDI8 760 aa18.58■□□□□ 0.57
LRP8-203ENST00000354412 PNISRQ8TF01 805 aaKnown RBP18.58■□□□□ 0.57
LRP8-203ENST00000354412 ERCC6L2Q5T890 1561 aa18.58■□□□□ 0.57
LRP8-203ENST00000354412 TCERG1O14776 1098 aaKnown RBP18.57■□□□□ 0.56
LRP8-203ENST00000354412 USP35Q9P2H5 1018 aa18.57■□□□□ 0.56
LRP8-203ENST00000354412 ZNF777Q9ULD5 760 aaPredicted RBP18.57■□□□□ 0.56
LRP8-203ENST00000354412 SHANK2Q9UPX8 1470 aa18.56■□□□□ 0.56
LRP8-203ENST00000354412 CFDP1Q9UEE9 299 aaPredicted RBP18.56■□□□□ 0.56
LRP8-203ENST00000354412 PTPRGP23470 1445 aa18.55■□□□□ 0.56
LRP8-203ENST00000354412 USP47Q96K76 1375 aa18.54■□□□□ 0.56
LRP8-203ENST00000354412 PLEKHD1A6NEE1 506 aa18.54■□□□□ 0.56
LRP8-203ENST00000354412 KTN1Q86UP2 1357 aaKnown RBP18.53■□□□□ 0.56
LRP8-203ENST00000354412 POLR3GLQ9BT43 218 aa18.52■□□□□ 0.56
LRP8-203ENST00000354412 ARHGEF5Q12774 1597 aa18.51■□□□□ 0.55
LRP8-203ENST00000354412 MS4A1P11836 297 aa18.5■□□□□ 0.55
LRP8-203ENST00000354412 PREX2Q70Z35 1606 aa18.5■□□□□ 0.55
LRP8-203ENST00000354412 KIF15Q9NS87 1388 aa18.49■□□□□ 0.55
LRP8-203ENST00000354412 RRP1P56182 461 aaKnown RBP18.49■□□□□ 0.55
LRP8-203ENST00000354412 CNGB1Q14028 1251 aaPredicted RBP18.49■□□□□ 0.55
LRP8-203ENST00000354412 BRD4O60885 1362 aaPredicted RBP18.48■□□□□ 0.55
LRP8-203ENST00000354412 MBD5Q9P267 1494 aa18.48■□□□□ 0.55
LRP8-203ENST00000354412 LRPPRCP42704 1394 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms