RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 NCOA1Q15788 1441 aa16.32■□□□□ 0.2
UBE2D3-205ENST00000350435 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
UBE2D3-205ENST00000350435 ZMYM4Q5VZL5 1548 aa16.32■□□□□ 0.2
UBE2D3-205ENST00000350435 TOM1O60784 492 aa16.29■□□□□ 0.2
UBE2D3-205ENST00000350435 MAGI2Q86UL8 1455 aa16.29■□□□□ 0.2
UBE2D3-205ENST00000350435 CFAP74Q9C0B2 1584 aa16.26■□□□□ 0.19
UBE2D3-205ENST00000350435 ARID3CA6NKF2 412 aa16.25■□□□□ 0.19
UBE2D3-205ENST00000350435 C3P01024 1663 aa16.24■□□□□ 0.19
UBE2D3-205ENST00000350435 CAMSAP1Q5T5Y3 1602 aa16.24■□□□□ 0.19
UBE2D3-205ENST00000350435 RGS17Q9UGC6 210 aaPredicted RBP16.22■□□□□ 0.19
UBE2D3-205ENST00000350435 HECW1Q76N89 1606 aa16.22■□□□□ 0.19
UBE2D3-205ENST00000350435 ATP10BO94823 1461 aa16.22■□□□□ 0.19
UBE2D3-205ENST00000350435 GOLGA3Q08378 1498 aa16.22■□□□□ 0.19
UBE2D3-205ENST00000350435 C9orf84Q5VXU9 1444 aa16.19■□□□□ 0.18
UBE2D3-205ENST00000350435 ATP10AO60312 1499 aa16.19■□□□□ 0.18
UBE2D3-205ENST00000350435 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
UBE2D3-205ENST00000350435 NCKAP5LQ9HCH0 1330 aa16.19■□□□□ 0.18
UBE2D3-205ENST00000350435 TRAPPC8Q9Y2L5 1435 aa16.18■□□□□ 0.18
UBE2D3-205ENST00000350435 SETD1AO15047 1707 aaKnown RBP16.16■□□□□ 0.18
UBE2D3-205ENST00000350435 SUPT6HQ7KZ85 1726 aaKnown RBP16.16■□□□□ 0.18
UBE2D3-205ENST00000350435 CTTNBP2Q8WZ74 1663 aa16.14■□□□□ 0.18
UBE2D3-205ENST00000350435 ESF1Q9H501 851 aaKnown RBP16.13■□□□□ 0.17
UBE2D3-205ENST00000350435 RAPGEF2Q9Y4G8 1499 aa16.12■□□□□ 0.17
UBE2D3-205ENST00000350435 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.12■□□□□ 0.17
UBE2D3-205ENST00000350435 HNRNPUL2Q1KMD3 747 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-205ENST00000350435 PKD2Q13563 968 aa16.11■□□□□ 0.17
UBE2D3-205ENST00000350435 PTPRKQ15262 1439 aa16.11■□□□□ 0.17
UBE2D3-205ENST00000350435 POTEAQ6S8J7 498 aa16.1■□□□□ 0.17
UBE2D3-205ENST00000350435 CPS1P31327 1500 aa16.09■□□□□ 0.17
UBE2D3-205ENST00000350435 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
UBE2D3-205ENST00000350435 PLA2R1Q13018 1463 aa16.06■□□□□ 0.16
UBE2D3-205ENST00000350435 SRCAPQ6ZRS2 3230 aa16.04■□□□□ 0.16
UBE2D3-205ENST00000350435 SCAPERQ9BY12 1400 aa16.04■□□□□ 0.16
UBE2D3-205ENST00000350435 TCOF1Q13428 1488 aaKnown RBP16.03■□□□□ 0.16
UBE2D3-205ENST00000350435 ALKQ9UM73 1620 aa16.02■□□□□ 0.16
UBE2D3-205ENST00000350435 UPF1Q92900 1129 aaKnown RBP eCLIP16.01■□□□□ 0.15
UBE2D3-205ENST00000350435 ZNF142P52746 1687 aaPredicted RBP16.01■□□□□ 0.15
UBE2D3-205ENST00000350435 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16■□□□□ 0.15
UBE2D3-205ENST00000350435 RAPGEF6Q8TEU7 1601 aa16■□□□□ 0.15
UBE2D3-205ENST00000350435 NPATQ14207 1427 aa16■□□□□ 0.15
UBE2D3-205ENST00000350435 SHANK2Q9UPX8 1470 aa15.99■□□□□ 0.15
UBE2D3-205ENST00000350435 CNTLNQ9NXG0 1405 aa15.98■□□□□ 0.15
UBE2D3-205ENST00000350435 AGLP35573 1532 aa15.98■□□□□ 0.15
UBE2D3-205ENST00000350435 MYO3AQ8NEV4 1616 aa15.97■□□□□ 0.15
UBE2D3-205ENST00000350435 PLEKHD1A6NEE1 506 aa15.96■□□□□ 0.15
UBE2D3-205ENST00000350435 MYT1LQ9UL68 1186 aa15.96■□□□□ 0.15
UBE2D3-205ENST00000350435 REREQ9P2R6 1566 aa15.96■□□□□ 0.14
UBE2D3-205ENST00000350435 MROH2AA6NES4 1674 aa15.95■□□□□ 0.14
UBE2D3-205ENST00000350435 CEP170BQ9Y4F5 1589 aaPredicted RBP15.95■□□□□ 0.14
UBE2D3-205ENST00000350435 DIP2CQ9Y2E4 1556 aa15.94■□□□□ 0.14
UBE2D3-205ENST00000350435 POLR1AO95602 1720 aaPredicted RBP15.94■□□□□ 0.14
UBE2D3-205ENST00000350435 P3H3Q8IVL6 736 aa15.93■□□□□ 0.14
UBE2D3-205ENST00000350435 ZNF518AQ6AHZ1 1483 aa15.91■□□□□ 0.14
UBE2D3-205ENST00000350435 RNF17Q9BXT8 1623 aaKnown RBP15.9■□□□□ 0.14
UBE2D3-205ENST00000350435 ABCA6Q8N139 1617 aa15.88■□□□□ 0.13
UBE2D3-205ENST00000350435 NUP153P49790 1475 aaKnown RBP15.87■□□□□ 0.13
UBE2D3-205ENST00000350435 KDM5CP41229 1560 aa15.87■□□□□ 0.13
UBE2D3-205ENST00000350435 PLCH2O75038 1416 aa15.86■□□□□ 0.13
UBE2D3-205ENST00000350435 ZMYM3Q14202 1370 aa15.86■□□□□ 0.13
UBE2D3-205ENST00000350435 VWDEQ8N2E2 1590 aa15.85■□□□□ 0.13
UBE2D3-205ENST00000350435 SUPT5HO00267 1087 aaKnown RBP15.85■□□□□ 0.13
UBE2D3-205ENST00000350435 MYO5CQ9NQX4 1742 aa15.84■□□□□ 0.13
UBE2D3-205ENST00000350435 NEURL4Q96JN8 1562 aa15.83■□□□□ 0.13
UBE2D3-205ENST00000350435 EFCAB2Q5VUJ9 269 aa15.83■□□□□ 0.12
UBE2D3-205ENST00000350435 AFAP1Q8N556 730 aa15.82■□□□□ 0.12
UBE2D3-205ENST00000350435 DNMT1P26358 1616 aaKnown RBP15.81■□□□□ 0.12
UBE2D3-205ENST00000350435 CLTCQ00610 1675 aaKnown RBP15.8■□□□□ 0.12
UBE2D3-205ENST00000350435 TRIM52Q96A61 297 aa15.8■□□□□ 0.12
UBE2D3-205ENST00000350435 SYNMO15061 1565 aa15.79■□□□□ 0.12
UBE2D3-205ENST00000350435 LRRC7Q96NW7 1537 aa15.78■□□□□ 0.12
UBE2D3-205ENST00000350435 A2ML1A8K2U0 1454 aa15.78■□□□□ 0.12
UBE2D3-205ENST00000350435 MLH3Q9UHC1 1453 aa15.78■□□□□ 0.12
UBE2D3-205ENST00000350435 SAMD9Q5K651 1589 aa15.76■□□□□ 0.11
UBE2D3-205ENST00000350435 STRCP1A6NGW2 1772 aa15.76■□□□□ 0.11
UBE2D3-205ENST00000350435 ADRA2BP18089 450 aa15.73■□□□□ 0.11
UBE2D3-205ENST00000350435 ANKLE2Q86XL3 938 aa15.72■□□□□ 0.11
UBE2D3-205ENST00000350435 ARHGAP5Q13017 1502 aa15.7■□□□□ 0.1
UBE2D3-205ENST00000350435 NPHP4O75161 1426 aaPredicted RBP15.69■□□□□ 0.1
UBE2D3-205ENST00000350435 FAM135BQ49AJ0 1406 aa15.69■□□□□ 0.1
UBE2D3-205ENST00000350435 ZNF772Q68DY9 489 aaPredicted RBP15.69■□□□□ 0.1
UBE2D3-205ENST00000350435 POTEDQ86YR6 584 aa15.69■□□□□ 0.1
UBE2D3-205ENST00000350435 ZRANB1Q9UGI0 708 aa15.69■□□□□ 0.1
UBE2D3-205ENST00000350435 IQGAP1P46940 1657 aa15.69■□□□□ 0.1
UBE2D3-205ENST00000350435 KIDINS220Q9ULH0 1771 aa15.69■□□□□ 0.1
UBE2D3-205ENST00000350435 DEPDC5O75140 1603 aa15.68■□□□□ 0.1
UBE2D3-205ENST00000350435 ITSN2Q9NZM3 1697 aa15.67■□□□□ 0.1
UBE2D3-205ENST00000350435 MED14O60244 1454 aa15.66■□□□□ 0.1
UBE2D3-205ENST00000350435 CDK13Q14004 1512 aaKnown RBP15.65■□□□□ 0.1
UBE2D3-205ENST00000350435 ROBO1Q9Y6N7 1651 aa15.65■□□□□ 0.1
UBE2D3-205ENST00000350435 RXRBP28702 533 aa15.65■□□□□ 0.1
UBE2D3-205ENST00000350435 XIRP1Q702N8 1843 aaKnown RBP15.64■□□□□ 0.09
UBE2D3-205ENST00000350435 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.63■□□□□ 0.09
UBE2D3-205ENST00000350435 SETBP1Q9Y6X0 1596 aa15.63■□□□□ 0.09
UBE2D3-205ENST00000350435 IFFO2Q5TF58 517 aa15.63■□□□□ 0.09
UBE2D3-205ENST00000350435 PIAS4Q8N2W9 510 aaPredicted RBP15.63■□□□□ 0.09
UBE2D3-205ENST00000350435 RBM33Q96EV2 1170 aaKnown RBP15.63■□□□□ 0.09
UBE2D3-205ENST00000350435 CDK12Q9NYV4 1490 aaPredicted RBP15.63■□□□□ 0.09
UBE2D3-205ENST00000350435 MEX3CQ5U5Q3 659 aaKnown RBP15.62■□□□□ 0.09
UBE2D3-205ENST00000350435 ABCC1P33527 1531 aa15.62■□□□□ 0.09
UBE2D3-205ENST00000350435 JCADQ9P266 1359 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms