RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 SMG6Q86US8 1419 aaKnown RBP23.84■■□□□ 1.41
APP-202ENST00000348990 SNAPC4Q5SXM2 1469 aa23.83■■□□□ 1.41
APP-202ENST00000348990 ZNF777Q9ULD5 760 aaPredicted RBP23.83■■□□□ 1.41
APP-202ENST00000348990 IL27Q8NEV9 243 aa23.83■■□□□ 1.4
APP-202ENST00000348990 EXOC6Q8TAG9 804 aa23.82■■□□□ 1.4
APP-202ENST00000348990 KDM2AQ9Y2K7 1162 aa23.82■■□□□ 1.4
APP-202ENST00000348990 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
APP-202ENST00000348990 ZNF644Q9H582 1327 aaPredicted RBP23.79■■□□□ 1.4
APP-202ENST00000348990 SUPT6HQ7KZ85 1726 aaKnown RBP23.76■■□□□ 1.39
APP-202ENST00000348990 PNISRQ8TF01 805 aaKnown RBP23.75■■□□□ 1.39
APP-202ENST00000348990 ANKRD30BQ9BXX2 1392 aa23.75■■□□□ 1.39
APP-202ENST00000348990 DENND4BO75064 1496 aaPredicted RBP23.74■■□□□ 1.39
APP-202ENST00000348990 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
APP-202ENST00000348990 PDE4AP27815 886 aa23.74■■□□□ 1.39
APP-202ENST00000348990 CARD11Q9BXL7 1154 aa23.74■■□□□ 1.39
APP-202ENST00000348990 USP47Q96K76 1375 aa23.74■■□□□ 1.39
APP-202ENST00000348990 EHBP1L1Q8N3D4 1523 aa23.73■■□□□ 1.39
APP-202ENST00000348990 DAXXQ9UER7 740 aaPredicted RBP23.72■■□□□ 1.39
APP-202ENST00000348990 RCAN3Q9UKA8 241 aa23.72■■□□□ 1.39
APP-202ENST00000348990 KDM6BO15054 1643 aa23.72■■□□□ 1.39
APP-202ENST00000348990 RRP1P56182 461 aaKnown RBP23.71■■□□□ 1.39
APP-202ENST00000348990 TOPBP1Q92547 1522 aa23.71■■□□□ 1.39
APP-202ENST00000348990 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
APP-202ENST00000348990 TCERG1O14776 1098 aaKnown RBP23.69■■□□□ 1.38
APP-202ENST00000348990 PKD2Q13563 968 aa23.69■■□□□ 1.38
APP-202ENST00000348990 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.68■■□□□ 1.38
APP-202ENST00000348990 PLIN1O60240 522 aa23.67■■□□□ 1.38
APP-202ENST00000348990 NESP48681 1621 aa23.67■■□□□ 1.38
APP-202ENST00000348990 RPRD2Q5VT52 1461 aaKnown RBP23.67■■□□□ 1.38
APP-202ENST00000348990 SKAP1Q86WV1 359 aa23.66■■□□□ 1.38
APP-202ENST00000348990 UGGT2Q9NYU1 1516 aa23.66■■□□□ 1.38
APP-202ENST00000348990 RNF123Q5XPI4 1314 aa23.65■■□□□ 1.38
APP-202ENST00000348990 DHX29Q7Z478 1369 aaKnown RBP23.65■■□□□ 1.38
APP-202ENST00000348990 MAGI3Q5TCQ9 1506 aa23.63■■□□□ 1.37
APP-202ENST00000348990 ST20-MTHFSA0A0A6YYL1 179 aa23.63■■□□□ 1.37
APP-202ENST00000348990 CTTNBP2Q8WZ74 1663 aa23.63■■□□□ 1.37
APP-202ENST00000348990 DNMBPQ6XZF7 1577 aa23.62■■□□□ 1.37
APP-202ENST00000348990 SPATA31E1Q6ZUB1 1445 aa23.61■■□□□ 1.37
APP-202ENST00000348990 CFDP1Q9UEE9 299 aaPredicted RBP23.61■■□□□ 1.37
APP-202ENST00000348990 PPM1GO15355 546 aaPredicted RBP23.61■■□□□ 1.37
APP-202ENST00000348990 SLC4A3P48751 1232 aa23.61■■□□□ 1.37
APP-202ENST00000348990 GAPVD1Q14C86 1478 aa23.6■■□□□ 1.37
APP-202ENST00000348990 CDK13Q14004 1512 aaKnown RBP23.6■■□□□ 1.37
APP-202ENST00000348990 CUL7Q14999 1698 aa23.6■■□□□ 1.37
APP-202ENST00000348990 HECW1Q76N89 1606 aa23.6■■□□□ 1.37
APP-202ENST00000348990 CDCA7LQ96GN5 454 aa23.6■■□□□ 1.37
APP-202ENST00000348990 PRDM2Q13029 1718 aa23.59■■□□□ 1.37
APP-202ENST00000348990 CC2D2AQ9P2K1 1620 aa23.58■■□□□ 1.37
APP-202ENST00000348990 BACH2Q9BYV9 841 aa23.58■■□□□ 1.37
APP-202ENST00000348990 DCAF11Q8TEB1 546 aa23.57■■□□□ 1.36
APP-202ENST00000348990 TEX14Q8IWB6 1497 aa23.56■■□□□ 1.36
APP-202ENST00000348990 MYBBP1AQ9BQG0 1328 aaKnown RBP23.56■■□□□ 1.36
APP-202ENST00000348990 KIF15Q9NS87 1388 aa23.55■■□□□ 1.36
APP-202ENST00000348990 MIA2Q96PC5 1412 aa23.55■■□□□ 1.36
APP-202ENST00000348990 CC2D1BQ5T0F9 858 aaKnown RBP23.55■■□□□ 1.36
APP-202ENST00000348990 DAPK1P53355 1430 aa23.54■■□□□ 1.36
APP-202ENST00000348990 TCOF1Q13428 1488 aaKnown RBP23.54■■□□□ 1.36
APP-202ENST00000348990 EPRSP07814 1512 aaKnown RBP23.54■■□□□ 1.36
APP-202ENST00000348990 RALBP1Q15311 655 aa23.53■■□□□ 1.36
APP-202ENST00000348990 EIF5BO60841 1220 aaKnown RBP23.52■■□□□ 1.36
APP-202ENST00000348990 USP35Q9P2H5 1018 aa23.52■■□□□ 1.36
APP-202ENST00000348990 LRRIQ1Q96JM4 1722 aa23.52■■□□□ 1.36
APP-202ENST00000348990 ABCC5O15440 1437 aa23.51■■□□□ 1.35
APP-202ENST00000348990 CRBNQ96SW2 442 aa23.51■■□□□ 1.35
APP-202ENST00000348990 RGL3Q3MIN7 710 aa23.5■■□□□ 1.35
APP-202ENST00000348990 DDRGK1Q96HY6 314 aa23.5■■□□□ 1.35
APP-202ENST00000348990 GCC2Q8IWJ2 1684 aa23.49■■□□□ 1.35
APP-202ENST00000348990 BRPF3Q9ULD4 1205 aa23.49■■□□□ 1.35
APP-202ENST00000348990 ROCK2O75116 1388 aaKnown RBP23.48■■□□□ 1.35
APP-202ENST00000348990 MS4A1P11836 297 aa23.48■■□□□ 1.35
APP-202ENST00000348990 NLRP13Q86W25 1043 aa23.48■■□□□ 1.35
APP-202ENST00000348990 SAMD9Q5K651 1589 aa23.47■■□□□ 1.35
APP-202ENST00000348990 BRD4O60885 1362 aaPredicted RBP23.45■■□□□ 1.34
APP-202ENST00000348990 ROCK1Q13464 1354 aa23.45■■□□□ 1.34
APP-202ENST00000348990 ARID4BQ4LE39 1312 aaPredicted RBP23.44■■□□□ 1.34
APP-202ENST00000348990 NUP155O75694 1391 aa23.44■■□□□ 1.34
APP-202ENST00000348990 THOC2Q8NI27 1593 aaKnown RBP23.44■■□□□ 1.34
APP-202ENST00000348990 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
APP-202ENST00000348990 KTN1Q86UP2 1357 aaKnown RBP23.43■■□□□ 1.34
APP-202ENST00000348990 RGS3P49796 1198 aa23.42■■□□□ 1.34
APP-202ENST00000348990 PDE3BQ13370 1112 aa23.42■■□□□ 1.34
APP-202ENST00000348990 GSE1Q14687 1217 aa23.42■■□□□ 1.34
APP-202ENST00000348990 NFKBIBQ15653 356 aa23.41■■□□□ 1.34
APP-202ENST00000348990 KIAA1107Q9UPP5 1409 aa23.4■■□□□ 1.34
APP-202ENST00000348990 URB2Q14146 1524 aaKnown RBP23.4■■□□□ 1.34
APP-202ENST00000348990 C20orf194Q5TEA3 1177 aa23.37■■□□□ 1.33
APP-202ENST00000348990 LRPPRCP42704 1394 aaKnown RBP23.35■■□□□ 1.33
APP-202ENST00000348990 TSPY4P0CV99 314 aa23.35■■□□□ 1.33
APP-202ENST00000348990 TSPY10P0CW01 314 aa23.35■■□□□ 1.33
APP-202ENST00000348990 BCORL1Q5H9F3 1711 aa23.35■■□□□ 1.33
APP-202ENST00000348990 FRAT1Q92837 279 aaPredicted RBP23.34■■□□□ 1.33
APP-202ENST00000348990 FBLN2P98095 1184 aa23.34■■□□□ 1.33
APP-202ENST00000348990 PZPP20742 1482 aa23.34■■□□□ 1.33
APP-202ENST00000348990 ANKRD30AQ9BXX3 1397 aa23.33■■□□□ 1.33
APP-202ENST00000348990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.33■■□□□ 1.332e-7■■□□□ 12.4
APP-202ENST00000348990 PDS5BQ9NTI5 1447 aa23.31■■□□□ 1.32
APP-202ENST00000348990 PRG4Q92954 1404 aaPredicted RBP23.3■■□□□ 1.32
APP-202ENST00000348990 PANK3Q9H999 370 aa23.29■■□□□ 1.32
APP-202ENST00000348990 NBPF1Q3BBV0 1214 aa23.29■■□□□ 1.32
APP-202ENST00000348990 ABCA5Q8WWZ7 1642 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms