RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 CNTLNQ9NXG0 1405 aa16.27■□□□□ 0.2
APP-201ENST00000346798 CCDC7Q96M83 1385 aa16.27■□□□□ 0.2
APP-201ENST00000346798 THOC2Q8NI27 1593 aaKnown RBP16.25■□□□□ 0.19
APP-201ENST00000346798 KIF7Q2M1P5 1343 aa16.24■□□□□ 0.19
APP-201ENST00000346798 FBLN2P98095 1184 aa16.23■□□□□ 0.19
APP-201ENST00000346798 HECW1Q76N89 1606 aa16.22■□□□□ 0.19
APP-201ENST00000346798 PPP4R2Q9NY27 417 aa16.22■□□□□ 0.19
APP-201ENST00000346798 KIF21AQ7Z4S6 1674 aa16.22■□□□□ 0.19
APP-201ENST00000346798 ARHGEF11O15085 1522 aa16.21■□□□□ 0.19
APP-201ENST00000346798 TCOF1Q13428 1488 aaKnown RBP16.21■□□□□ 0.18
APP-201ENST00000346798 IQGAP2Q13576 1575 aa16.2■□□□□ 0.18
APP-201ENST00000346798 ANKRD30BQ9BXX2 1392 aa16.2■□□□□ 0.18
APP-201ENST00000346798 CFDP1Q9UEE9 299 aaPredicted RBP16.2■□□□□ 0.18
APP-201ENST00000346798 NCOA1Q15788 1441 aa16.19■□□□□ 0.18
APP-201ENST00000346798 DAPK1P53355 1430 aa16.18■□□□□ 0.18
APP-201ENST00000346798 GCC2Q8IWJ2 1684 aa16.18■□□□□ 0.18
APP-201ENST00000346798 MIA2Q96PC5 1412 aa16.18■□□□□ 0.18
APP-201ENST00000346798 ABCC5O15440 1437 aa16.17■□□□□ 0.18
APP-201ENST00000346798 KDM2AQ9Y2K7 1162 aa16.17■□□□□ 0.18
APP-201ENST00000346798 PKD2Q13563 968 aa16.15■□□□□ 0.18
APP-201ENST00000346798 TARBP1Q13395 1621 aaKnown RBP16.15■□□□□ 0.18
APP-201ENST00000346798 ZBED9Q6R2W3 1325 aa16.15■□□□□ 0.18
APP-201ENST00000346798 RPRD2Q5VT52 1461 aaKnown RBP16.14■□□□□ 0.17
APP-201ENST00000346798 BCL11AQ9H165 835 aa16.13■□□□□ 0.17
APP-201ENST00000346798 WDR62O43379 1518 aa16.13■□□□□ 0.17
APP-201ENST00000346798 ZNF608Q9ULD9 1512 aaPredicted RBP16.13■□□□□ 0.17
APP-201ENST00000346798 SALL2Q9Y467 1007 aaPredicted RBP16.13■□□□□ 0.17
APP-201ENST00000346798 AKNAQ7Z591 1439 aa16.13■□□□□ 0.17
APP-201ENST00000346798 PRG4Q92954 1404 aaPredicted RBP16.13■□□□□ 0.17
APP-201ENST00000346798 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
APP-201ENST00000346798 TEX14Q8IWB6 1497 aa16.1■□□□□ 0.17
APP-201ENST00000346798 USP47Q96K76 1375 aa16.09■□□□□ 0.17
APP-201ENST00000346798 FANCIQ9NVI1 1328 aa16.09■□□□□ 0.17
APP-201ENST00000346798 TMC1Q8TDI8 760 aa16.09■□□□□ 0.17
APP-201ENST00000346798 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
APP-201ENST00000346798 ADAMTS12P58397 1594 aa16.08■□□□□ 0.16
APP-201ENST00000346798 NUP153P49790 1475 aaKnown RBP16.08■□□□□ 0.16
APP-201ENST00000346798 ROCK1Q13464 1354 aa16.08■□□□□ 0.16
APP-201ENST00000346798 CARD11Q9BXL7 1154 aa16.07■□□□□ 0.16
APP-201ENST00000346798 CCDC136Q96JN2 1154 aa16.06■□□□□ 0.16
APP-201ENST00000346798 SPATA31E1Q6ZUB1 1445 aa16.06■□□□□ 0.16
APP-201ENST00000346798 ERICH6BQ5W0A0 696 aa16.06■□□□□ 0.16
APP-201ENST00000346798 PLB1Q6P1J6 1458 aa16.03■□□□□ 0.16
APP-201ENST00000346798 DISP1Q96F81 1524 aa16.03■□□□□ 0.16
APP-201ENST00000346798 DNMT1P26358 1616 aaKnown RBP16.03■□□□□ 0.16
APP-201ENST00000346798 NUP155O75694 1391 aa16.03■□□□□ 0.16
APP-201ENST00000346798 DCAF11Q8TEB1 546 aa16.03■□□□□ 0.16
APP-201ENST00000346798 PZPP20742 1482 aa16.02■□□□□ 0.16
APP-201ENST00000346798 CAMSAP2Q08AD1 1489 aa16.02■□□□□ 0.16
APP-201ENST00000346798 NBR1Q14596 966 aa16.02■□□□□ 0.15
APP-201ENST00000346798 ST20-MTHFSA0A0A6YYL1 179 aa16.02■□□□□ 0.15
APP-201ENST00000346798 NUDCQ9Y266 331 aa16.02■□□□□ 0.15
APP-201ENST00000346798 DHX29Q7Z478 1369 aaKnown RBP16.01■□□□□ 0.15
APP-201ENST00000346798 MRC2Q9UBG0 1479 aa16.01■□□□□ 0.15
APP-201ENST00000346798 RGL3Q3MIN7 710 aa16■□□□□ 0.15
APP-201ENST00000346798 KIAA0586Q9BVV6 1533 aa16■□□□□ 0.15
APP-201ENST00000346798 KIAA0556O60303 1618 aa15.99■□□□□ 0.15
APP-201ENST00000346798 KIAA1107Q9UPP5 1409 aa15.99■□□□□ 0.15
APP-201ENST00000346798 ANKRD30AQ9BXX3 1397 aa15.99■□□□□ 0.15
APP-201ENST00000346798 HNRNPMP52272 730 aaKnown RBP eCLIP15.99■□□□□ 0.151e-6■□□□□ 11.1
APP-201ENST00000346798 TROQ12816 1431 aaPredicted RBP15.98■□□□□ 0.15
APP-201ENST00000346798 PLEKHD1A6NEE1 506 aa15.98■□□□□ 0.15
APP-201ENST00000346798 TSPY4P0CV99 314 aa15.98■□□□□ 0.15
APP-201ENST00000346798 TSPY10P0CW01 314 aa15.98■□□□□ 0.15
APP-201ENST00000346798 RAPGEF6Q8TEU7 1601 aa15.98■□□□□ 0.15
APP-201ENST00000346798 ANKRD50Q9ULJ7 1429 aa15.97■□□□□ 0.15
APP-201ENST00000346798 PNISRQ8TF01 805 aaKnown RBP15.97■□□□□ 0.15
APP-201ENST00000346798 GPATCH8Q9UKJ3 1502 aaKnown RBP15.96■□□□□ 0.15
APP-201ENST00000346798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.96■□□□□ 0.152e-7■■□□□ 12.4
APP-201ENST00000346798 BCORL1Q5H9F3 1711 aa15.96■□□□□ 0.14
APP-201ENST00000346798 JPH4Q96JJ6 628 aa15.96■□□□□ 0.14
APP-201ENST00000346798 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
APP-201ENST00000346798 GRIN2AQ12879 1464 aa15.95■□□□□ 0.14
APP-201ENST00000346798 KIF14Q15058 1648 aa15.95■□□□□ 0.14
APP-201ENST00000346798 SMG6Q86US8 1419 aaKnown RBP15.94■□□□□ 0.14
APP-201ENST00000346798 NPM2Q86SE8 214 aaKnown RBP15.93■□□□□ 0.14
APP-201ENST00000346798 IFT140Q96RY7 1462 aa15.92■□□□□ 0.14
APP-201ENST00000346798 NOP58Q9Y2X3 529 aaKnown RBP15.92■□□□□ 0.14
APP-201ENST00000346798 ROCK2O75116 1388 aaKnown RBP15.9■□□□□ 0.14
APP-201ENST00000346798 CC2D1BQ5T0F9 858 aaKnown RBP15.89■□□□□ 0.13
APP-201ENST00000346798 ANP32AP39687 249 aaKnown RBP15.88■□□□□ 0.13
APP-201ENST00000346798 EXOC6Q8TAG9 804 aa15.88■□□□□ 0.13
APP-201ENST00000346798 MBD5Q9P267 1494 aa15.88■□□□□ 0.13
APP-201ENST00000346798 NBPF1Q3BBV0 1214 aa15.88■□□□□ 0.13
APP-201ENST00000346798 C9orf84Q5VXU9 1444 aa15.88■□□□□ 0.13
APP-201ENST00000346798 KIF15Q9NS87 1388 aa15.87■□□□□ 0.13
APP-201ENST00000346798 DEKP35659 375 aaKnown RBP15.86■□□□□ 0.13
APP-201ENST00000346798 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
APP-201ENST00000346798 MYBBP1AQ9BQG0 1328 aaKnown RBP15.86■□□□□ 0.13
APP-201ENST00000346798 CARMIL2Q6F5E8 1435 aa15.86■□□□□ 0.13
APP-201ENST00000346798 KDM5CP41229 1560 aa15.85■□□□□ 0.13
APP-201ENST00000346798 POLR1AO95602 1720 aaPredicted RBP15.85■□□□□ 0.13
APP-201ENST00000346798 CDCA7LQ96GN5 454 aa15.85■□□□□ 0.13
APP-201ENST00000346798 EIF4G3O43432 1585 aaKnown RBP15.85■□□□□ 0.13
APP-201ENST00000346798 PLIN1O60240 522 aa15.84■□□□□ 0.13
APP-201ENST00000346798 RCAN3Q9UKA8 241 aa15.83■□□□□ 0.12
APP-201ENST00000346798 ITSN2Q9NZM3 1697 aa15.83■□□□□ 0.12
APP-201ENST00000346798 ARID4BQ4LE39 1312 aaPredicted RBP15.82■□□□□ 0.12
APP-201ENST00000346798 RRP1P56182 461 aaKnown RBP15.82■□□□□ 0.12
APP-201ENST00000346798 RALBP1Q15311 655 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms