RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 MYOM3Q5VTT5 1437 aa17.23■□□□□ 0.35
TCF3-202ENST00000344749 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
TCF3-202ENST00000344749 RBM19Q9Y4C8 960 aaKnown RBP17.21■□□□□ 0.35
TCF3-202ENST00000344749 KIF3BO15066 747 aa17.21■□□□□ 0.35
TCF3-202ENST00000344749 CASKIN1Q8WXD9 1431 aa17.21■□□□□ 0.35
TCF3-202ENST00000344749 HMGXB3Q12766 1538 aa17.21■□□□□ 0.35
TCF3-202ENST00000344749 TSHZ2Q9NRE2 1034 aa17.21■□□□□ 0.34
TCF3-202ENST00000344749 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
TCF3-202ENST00000344749 NCOA2Q15596 1464 aa17.19■□□□□ 0.34
TCF3-202ENST00000344749 MLECQ14165 292 aa17.19■□□□□ 0.34
TCF3-202ENST00000344749 TOPBP1Q92547 1522 aa17.19■□□□□ 0.34
TCF3-202ENST00000344749 ANP32EQ9BTT0 268 aa17.19■□□□□ 0.34
TCF3-202ENST00000344749 PRKRIP1Q9H875 184 aaPredicted RBP17.19■□□□□ 0.34
TCF3-202ENST00000344749 RGS3P49796 1198 aa17.17■□□□□ 0.34
TCF3-202ENST00000344749 FRAT1Q92837 279 aaPredicted RBP17.17■□□□□ 0.34
TCF3-202ENST00000344749 PTPRGP23470 1445 aa17.17■□□□□ 0.34
TCF3-202ENST00000344749 EIF5BO60841 1220 aaKnown RBP17.16■□□□□ 0.34
TCF3-202ENST00000344749 POGKQ9P215 609 aa17.16■□□□□ 0.34
TCF3-202ENST00000344749 UPF2Q9HAU5 1272 aaKnown RBP17.16■□□□□ 0.34
TCF3-202ENST00000344749 ARID4BQ4LE39 1312 aaPredicted RBP17.16■□□□□ 0.34
TCF3-202ENST00000344749 CFAP53Q96M91 514 aa17.15■□□□□ 0.34
TCF3-202ENST00000344749 UACAQ9BZF9 1416 aa17.15■□□□□ 0.34
TCF3-202ENST00000344749 STK26Q9P289 416 aa17.15■□□□□ 0.34
TCF3-202ENST00000344749 NUTM2DQ5VT03 806 aaPredicted RBP17.14■□□□□ 0.33
TCF3-202ENST00000344749 KANK1Q14678 1352 aa17.14■□□□□ 0.33
TCF3-202ENST00000344749 SPAG9O60271 1321 aaKnown RBP17.13■□□□□ 0.33
TCF3-202ENST00000344749 KTN1Q86UP2 1357 aaKnown RBP17.13■□□□□ 0.33
TCF3-202ENST00000344749 U2SURPO15042 1029 aaKnown RBP17.13■□□□□ 0.33
TCF3-202ENST00000344749 UNC13AQ9UPW8 1703 aa17.12■□□□□ 0.33
TCF3-202ENST00000344749 ARXQ96QS3 562 aa17.12■□□□□ 0.33
TCF3-202ENST00000344749 HSP90AA1P07900 732 aaKnown RBP17.11■□□□□ 0.33
TCF3-202ENST00000344749 LAS1LQ9Y4W2 734 aaKnown RBP17.1■□□□□ 0.33
TCF3-202ENST00000344749 USP47Q96K76 1375 aa17.1■□□□□ 0.33
TCF3-202ENST00000344749 WASHC2AQ641Q2 1341 aa17.09■□□□□ 0.33
TCF3-202ENST00000344749 FYCO1Q9BQS8 1478 aa17.09■□□□□ 0.33
TCF3-202ENST00000344749 SRPK2P78362 688 aaKnown RBP17.09■□□□□ 0.33
TCF3-202ENST00000344749 C14orf37Q86TY3 774 aa17.08■□□□□ 0.33
TCF3-202ENST00000344749 RSPH4AQ5TD94 716 aa17.08■□□□□ 0.32
TCF3-202ENST00000344749 ZBTB7CA1YPR0 619 aa17.08■□□□□ 0.32
TCF3-202ENST00000344749 TIAM1Q13009 1591 aa17.08■□□□□ 0.32
TCF3-202ENST00000344749 RALBP1Q15311 655 aa17.07■□□□□ 0.32
TCF3-202ENST00000344749 MORC1Q86VD1 984 aa17.07■□□□□ 0.32
TCF3-202ENST00000344749 RCAN3Q9UKA8 241 aa17.07■□□□□ 0.32
TCF3-202ENST00000344749 KIF7Q2M1P5 1343 aa17.06■□□□□ 0.32
TCF3-202ENST00000344749 NLRP13Q86W25 1043 aa17.05■□□□□ 0.32
TCF3-202ENST00000344749 PANK3Q9H999 370 aa17.05■□□□□ 0.32
TCF3-202ENST00000344749 NUDCQ9Y266 331 aa17.05■□□□□ 0.32
TCF3-202ENST00000344749 CCDC144AA2RUR9 1427 aa17.05■□□□□ 0.32
TCF3-202ENST00000344749 PEG3Q9GZU2 1588 aa17.05■□□□□ 0.32
TCF3-202ENST00000344749 GRIN2BQ13224 1484 aa17.04■□□□□ 0.32
TCF3-202ENST00000344749 NBPF8Q3BBV2 869 aa17.04■□□□□ 0.32
TCF3-202ENST00000344749 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
TCF3-202ENST00000344749 MAPK8IP3Q9UPT6 1336 aa17.03■□□□□ 0.32
TCF3-202ENST00000344749 CCDC146Q8IYE0 955 aa17.03■□□□□ 0.32
TCF3-202ENST00000344749 SOX12O15370 315 aa17.03■□□□□ 0.32
TCF3-202ENST00000344749 FTSJ3Q8IY81 847 aaKnown RBP17.03■□□□□ 0.32
TCF3-202ENST00000344749 KIF15Q9NS87 1388 aa17.02■□□□□ 0.31
TCF3-202ENST00000344749 TRAK1Q9UPV9 953 aa17.01■□□□□ 0.31
TCF3-202ENST00000344749 CCDC7Q96M83 1385 aa17.01■□□□□ 0.31
TCF3-202ENST00000344749 PRG4Q92954 1404 aaPredicted RBP17■□□□□ 0.31
TCF3-202ENST00000344749 ANKRD50Q9ULJ7 1429 aa17■□□□□ 0.31
TCF3-202ENST00000344749 WDR97A6NE52 1622 aa16.99■□□□□ 0.31
TCF3-202ENST00000344749 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
TCF3-202ENST00000344749 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
TCF3-202ENST00000344749 WASHC2CQ9Y4E1 1318 aa16.97■□□□□ 0.31
TCF3-202ENST00000344749 HFM1A2PYH4 1435 aa16.97■□□□□ 0.31
TCF3-202ENST00000344749 ABCA10Q8WWZ4 1543 aa16.97■□□□□ 0.31
TCF3-202ENST00000344749 CCDC184Q52MB2 194 aa16.96■□□□□ 0.31
TCF3-202ENST00000344749 PLIN1O60240 522 aa16.96■□□□□ 0.31
TCF3-202ENST00000344749 U2AF1L5P0DN76 240 aaPredicted RBP16.96■□□□□ 0.31
TCF3-202ENST00000344749 U2AF1Q01081 240 aaKnown RBP eCLIP16.96■□□□□ 0.31
TCF3-202ENST00000344749 EFCAB5A4FU69 1503 aa16.96■□□□□ 0.31
TCF3-202ENST00000344749 AFAP1Q8N556 730 aa16.96■□□□□ 0.31
TCF3-202ENST00000344749 MYBBP1AQ9BQG0 1328 aaKnown RBP16.95■□□□□ 0.3
TCF3-202ENST00000344749 CDK13Q14004 1512 aaKnown RBP16.95■□□□□ 0.3
TCF3-202ENST00000344749 PCF11O94913 1555 aaKnown RBP16.94■□□□□ 0.3
TCF3-202ENST00000344749 NAIPQ13075 1403 aa16.94■□□□□ 0.3
TCF3-202ENST00000344749 ZBED9Q6R2W3 1325 aa16.94■□□□□ 0.3
TCF3-202ENST00000344749 MYH16Q9H6N6 1097 aa16.93■□□□□ 0.3
TCF3-202ENST00000344749 ERICH6BQ5W0A0 696 aa16.93■□□□□ 0.3
TCF3-202ENST00000344749 NBPF1Q3BBV0 1214 aa16.92■□□□□ 0.3
TCF3-202ENST00000344749 DDRGK1Q96HY6 314 aa16.91■□□□□ 0.3
TCF3-202ENST00000344749 RRP7AQ9Y3A4 280 aaKnown RBP16.91■□□□□ 0.3
TCF3-202ENST00000344749 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
TCF3-202ENST00000344749 SNAPC4Q5SXM2 1469 aa16.9■□□□□ 0.3
TCF3-202ENST00000344749 GOLGA2Q08379 1002 aa16.89■□□□□ 0.29
TCF3-202ENST00000344749 CLUAP1Q96AJ1 413 aa16.89■□□□□ 0.29
TCF3-202ENST00000344749 CNTLNQ9NXG0 1405 aa16.89■□□□□ 0.29
TCF3-202ENST00000344749 LMOD2Q6P5Q4 547 aa16.88■□□□□ 0.29
TCF3-202ENST00000344749 EXOC6Q8TAG9 804 aa16.88■□□□□ 0.29
TCF3-202ENST00000344749 C11orf95C9JLR9 678 aaPredicted RBP16.87■□□□□ 0.29
TCF3-202ENST00000344749 CYB5RLQ6IPT4 315 aa16.87■□□□□ 0.29
TCF3-202ENST00000344749 EPRSP07814 1512 aaKnown RBP16.86■□□□□ 0.29
TCF3-202ENST00000344749 EHBP1L1Q8N3D4 1523 aa16.86■□□□□ 0.29
TCF3-202ENST00000344749 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
TCF3-202ENST00000344749 BIVM-ERCC5R4GMW8 1640 aa16.86■□□□□ 0.29
TCF3-202ENST00000344749 NUTM2FA1L443 756 aa16.85■□□□□ 0.29
TCF3-202ENST00000344749 BECN1Q14457 450 aa16.85■□□□□ 0.29
TCF3-202ENST00000344749 TROQ12816 1431 aaPredicted RBP16.85■□□□□ 0.29
TCF3-202ENST00000344749 MIA2Q96PC5 1412 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms