RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 FOXD1Q16676 465 aa30.36■■■□□ 2.45
CCDC38-201ENST00000344280 CDK11AQ9UQ88 783 aaPredicted RBP30.34■■■□□ 2.45
CCDC38-201ENST00000344280 DNMT1P26358 1616 aaKnown RBP30.32■■■□□ 2.44
CCDC38-201ENST00000344280 ROCK1Q13464 1354 aa30.3■■■□□ 2.44
CCDC38-201ENST00000344280 TROQ12816 1431 aaPredicted RBP30.28■■■□□ 2.44
CCDC38-201ENST00000344280 JPH4Q96JJ6 628 aa30.28■■■□□ 2.44
CCDC38-201ENST00000344280 NUP160Q12769 1436 aa30.27■■■□□ 2.44
CCDC38-201ENST00000344280 SUPT16HQ9Y5B9 1047 aaKnown RBP30.26■■■□□ 2.43
CCDC38-201ENST00000344280 ANP32CO43423 234 aa30.24■■■□□ 2.43
CCDC38-201ENST00000344280 KIF14Q15058 1648 aa30.22■■■□□ 2.43
CCDC38-201ENST00000344280 L3MBTL2Q969R5 705 aa30.21■■■□□ 2.43
CCDC38-201ENST00000344280 CFDP1Q9UEE9 299 aaPredicted RBP30.21■■■□□ 2.43
CCDC38-201ENST00000344280 CARMIL2Q6F5E8 1435 aa30.2■■■□□ 2.43
CCDC38-201ENST00000344280 CAMSAP2Q08AD1 1489 aa30.2■■■□□ 2.43
CCDC38-201ENST00000344280 GPATCH8Q9UKJ3 1502 aaKnown RBP30.2■■■□□ 2.42
CCDC38-201ENST00000344280 CCER2I3L3R5 266 aa30.17■■■□□ 2.42
CCDC38-201ENST00000344280 HSPA5P11021 654 aaKnown RBP30.17■■■□□ 2.42
CCDC38-201ENST00000344280 ANKRD30BQ9BXX2 1392 aa30.17■■■□□ 2.42
CCDC38-201ENST00000344280 ZNF777Q9ULD5 760 aaPredicted RBP30.16■■■□□ 2.42
CCDC38-201ENST00000344280 SLC4A1APQ9BWU0 796 aaKnown RBP30.13■■■□□ 2.41
CCDC38-201ENST00000344280 ADCY10Q96PN6 1610 aa30.12■■■□□ 2.41
CCDC38-201ENST00000344280 WASHC2AQ641Q2 1341 aa30.11■■■□□ 2.41
CCDC38-201ENST00000344280 ITSN2Q9NZM3 1697 aa30.11■■■□□ 2.41
CCDC38-201ENST00000344280 RPRD2Q5VT52 1461 aaKnown RBP30.1■■■□□ 2.41
CCDC38-201ENST00000344280 NCOA1Q15788 1441 aa30.1■■■□□ 2.41
CCDC38-201ENST00000344280 ABCA8O94911 1581 aa30.07■■■□□ 2.4
CCDC38-201ENST00000344280 EIF4G2P78344 907 aaKnown RBP eCLIP30.06■■■□□ 2.4
CCDC38-201ENST00000344280 NBPF8Q3BBV2 869 aa30.06■■■□□ 2.4
CCDC38-201ENST00000344280 PZPP20742 1482 aa30.05■■■□□ 2.4
CCDC38-201ENST00000344280 TEX14Q8IWB6 1497 aa30.05■■■□□ 2.4
CCDC38-201ENST00000344280 ATP10BO94823 1461 aa30.04■■■□□ 2.4
CCDC38-201ENST00000344280 PLEKHD1A6NEE1 506 aa30.02■■■□□ 2.4
CCDC38-201ENST00000344280 ADGBQ8N7X0 1667 aa30.01■■■□□ 2.39
CCDC38-201ENST00000344280 CROCC2H7BZ55 1655 aa30■■■□□ 2.39
CCDC38-201ENST00000344280 ADGRL2O95490 1459 aa29.99■■■□□ 2.39
CCDC38-201ENST00000344280 C11orf95C9JLR9 678 aaPredicted RBP29.99■■■□□ 2.39
CCDC38-201ENST00000344280 ABCC10Q5T3U5 1492 aa29.98■■■□□ 2.39
CCDC38-201ENST00000344280 CDC42BPAQ5VT25 1732 aa29.97■■■□□ 2.39
CCDC38-201ENST00000344280 MYT1Q01538 1121 aa29.95■■■□□ 2.39
CCDC38-201ENST00000344280 ANKRD30AQ9BXX3 1397 aa29.93■■■□□ 2.38
CCDC38-201ENST00000344280 ANKRD50Q9ULJ7 1429 aa29.89■■■□□ 2.38
CCDC38-201ENST00000344280 PKD2Q13563 968 aa29.88■■■□□ 2.37
CCDC38-201ENST00000344280 KIAA1107Q9UPP5 1409 aa29.88■■■□□ 2.37
CCDC38-201ENST00000344280 PTPRGP23470 1445 aa29.87■■■□□ 2.37
CCDC38-201ENST00000344280 CCDC7Q96M83 1385 aa29.86■■■□□ 2.37
CCDC38-201ENST00000344280 CNTLNQ9NXG0 1405 aa29.86■■■□□ 2.37
CCDC38-201ENST00000344280 C9orf84Q5VXU9 1444 aa29.85■■■□□ 2.37
CCDC38-201ENST00000344280 SPATA31E1Q6ZUB1 1445 aa29.85■■■□□ 2.37
CCDC38-201ENST00000344280 FKBP8Q14318 412 aa29.84■■■□□ 2.37
CCDC38-201ENST00000344280 BCANQ96GW7 911 aa29.83■■■□□ 2.37
CCDC38-201ENST00000344280 HNRNPMP52272 730 aaKnown RBP eCLIP29.82■■■□□ 2.36
CCDC38-201ENST00000344280 SHANK2Q9UPX8 1470 aa29.8■■■□□ 2.36
CCDC38-201ENST00000344280 MBD5Q9P267 1494 aa29.79■■■□□ 2.36
CCDC38-201ENST00000344280 NUP155O75694 1391 aa29.78■■■□□ 2.36
CCDC38-201ENST00000344280 CCDC184Q52MB2 194 aa29.78■■■□□ 2.36
CCDC38-201ENST00000344280 KIF7Q2M1P5 1343 aa29.76■■■□□ 2.36
CCDC38-201ENST00000344280 CHD1O14646 1710 aa29.76■■■□□ 2.36
CCDC38-201ENST00000344280 TSPY4P0CV99 314 aa29.76■■■□□ 2.35
CCDC38-201ENST00000344280 TSPY10P0CW01 314 aa29.76■■■□□ 2.35
CCDC38-201ENST00000344280 ZNF326Q5BKZ1 582 aaKnown RBP29.74■■■□□ 2.35
CCDC38-201ENST00000344280 HNRNPUQ00839 825 aaKnown RBP eCLIP29.74■■■□□ 2.35
CCDC38-201ENST00000344280 KIF15Q9NS87 1388 aa29.72■■■□□ 2.35
CCDC38-201ENST00000344280 PRKRIP1Q9H875 184 aaPredicted RBP29.71■■■□□ 2.35
CCDC38-201ENST00000344280 CDC42BPBQ9Y5S2 1711 aa29.69■■■□□ 2.34
CCDC38-201ENST00000344280 SAMD9LQ8IVG5 1584 aa29.69■■■□□ 2.34
CCDC38-201ENST00000344280 ARHGEF5Q12774 1597 aa29.68■■■□□ 2.34
CCDC38-201ENST00000344280 POLR1AO95602 1720 aaPredicted RBP29.65■■■□□ 2.34
CCDC38-201ENST00000344280 PREX2Q70Z35 1606 aa29.65■■■□□ 2.34
CCDC38-201ENST00000344280 ERCC6L2Q5T890 1561 aa29.64■■■□□ 2.34
CCDC38-201ENST00000344280 KDM5DQ9BY66 1539 aa29.64■■■□□ 2.34
CCDC38-201ENST00000344280 USP47Q96K76 1375 aa29.64■■■□□ 2.34
CCDC38-201ENST00000344280 NEFLP07196 543 aa29.62■■■□□ 2.33
CCDC38-201ENST00000344280 TSHZ2Q9NRE2 1034 aa29.62■■■□□ 2.33
CCDC38-201ENST00000344280 CCDC141Q6ZP82 1450 aa29.62■■■□□ 2.33
CCDC38-201ENST00000344280 SHROOM2Q13796 1616 aa29.62■■■□□ 2.33
CCDC38-201ENST00000344280 BCORL1Q5H9F3 1711 aa29.6■■■□□ 2.33
CCDC38-201ENST00000344280 TTC37Q6PGP7 1564 aa29.59■■■□□ 2.33
CCDC38-201ENST00000344280 SYCP2Q9BX26 1530 aa29.56■■■□□ 2.32
CCDC38-201ENST00000344280 UHRF1BP1Q6BDS2 1440 aa29.56■■■□□ 2.32
CCDC38-201ENST00000344280 KDM5CP41229 1560 aa29.56■■■□□ 2.32
CCDC38-201ENST00000344280 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.55■■■□□ 2.32
CCDC38-201ENST00000344280 MRS2Q9HD23 443 aa29.55■■■□□ 2.32
CCDC38-201ENST00000344280 FAM9BQ8IZU0 186 aa29.55■■■□□ 2.32
CCDC38-201ENST00000344280 KDM2AQ9Y2K7 1162 aa29.54■■■□□ 2.32
CCDC38-201ENST00000344280 POLR3GLQ9BT43 218 aa29.53■■■□□ 2.32
CCDC38-201ENST00000344280 ARHGAP5Q13017 1502 aa29.53■■■□□ 2.32
CCDC38-201ENST00000344280 RALGAPBQ86X10 1494 aa29.51■■■□□ 2.32
CCDC38-201ENST00000344280 FAM135AQ9P2D6 1515 aa29.51■■■□□ 2.31
CCDC38-201ENST00000344280 RSPH4AQ5TD94 716 aa29.51■■■□□ 2.31
CCDC38-201ENST00000344280 ABCC2Q92887 1545 aa29.5■■■□□ 2.31
CCDC38-201ENST00000344280 DHX29Q7Z478 1369 aaKnown RBP29.5■■■□□ 2.31
CCDC38-201ENST00000344280 ARHGEF12Q9NZN5 1544 aa29.5■■■□□ 2.31
CCDC38-201ENST00000344280 CNGB1Q14028 1251 aaPredicted RBP29.48■■■□□ 2.31
CCDC38-201ENST00000344280 DCAF11Q8TEB1 546 aa29.48■■■□□ 2.31
CCDC38-201ENST00000344280 CARD11Q9BXL7 1154 aa29.48■■■□□ 2.31
CCDC38-201ENST00000344280 IRX6P78412 446 aaPredicted RBP29.41■■■□□ 2.3
CCDC38-201ENST00000344280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.41■■■□□ 2.3
CCDC38-201ENST00000344280 MAST1Q9Y2H9 1570 aa29.41■■■□□ 2.3
CCDC38-201ENST00000344280 MYO5CQ9NQX4 1742 aa29.4■■■□□ 2.3
CCDC38-201ENST00000344280 ST20-MTHFSA0A0A6YYL1 179 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms