RNA–Protein interactions for RNA: ENST00000343484.9

TCEA2-202, Transcript of transcription elongation factor A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCEA2, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA2-202ENST00000343484 VPS8Q8N3P4 1428 aa42.08■■■■■ 4.33
TCEA2-202ENST00000343484 RICTORQ6R327 1708 aa42.04■■■■■ 4.32
TCEA2-202ENST00000343484 CDC42BPBQ9Y5S2 1711 aa42■■■■■ 4.31
TCEA2-202ENST00000343484 PREX2Q70Z35 1606 aa41.98■■■■■ 4.31
TCEA2-202ENST00000343484 POGZQ7Z3K3 1410 aa41.98■■■■■ 4.31
TCEA2-202ENST00000343484 CCNB3Q8WWL7 1395 aa41.94■■■■■ 4.3
TCEA2-202ENST00000343484 CDC42BPAQ5VT25 1732 aa41.93■■■■■ 4.3
TCEA2-202ENST00000343484 EHBP1L1Q8N3D4 1523 aa41.93■■■■■ 4.3
TCEA2-202ENST00000343484 GPATCH8Q9UKJ3 1502 aaKnown RBP41.92■■■■■ 4.3
TCEA2-202ENST00000343484 ZNF777Q9ULD5 760 aaPredicted RBP41.92■■■■■ 4.3
TCEA2-202ENST00000343484 ZMYM4Q5VZL5 1548 aa41.91■■■■■ 4.3
TCEA2-202ENST00000343484 AFAP1Q8N556 730 aa41.88■■■■■ 4.29
TCEA2-202ENST00000343484 MAGI2Q86UL8 1455 aa41.87■■■■■ 4.29
TCEA2-202ENST00000343484 CFDP1Q9UEE9 299 aaPredicted RBP41.87■■■■■ 4.29
TCEA2-202ENST00000343484 TIAM1Q13009 1591 aa41.86■■■■■ 4.29
TCEA2-202ENST00000343484 ARID4BQ4LE39 1312 aaPredicted RBP41.86■■■■■ 4.29
TCEA2-202ENST00000343484 ZNF518AQ6AHZ1 1483 aa41.85■■■■■ 4.29
TCEA2-202ENST00000343484 ARHGEF40Q8TER5 1519 aa41.85■■■■■ 4.29
TCEA2-202ENST00000343484 ZFYVE16Q7Z3T8 1539 aa41.85■■■■■ 4.29
TCEA2-202ENST00000343484 YEATS2Q9ULM3 1422 aa41.83■■■■■ 4.29
TCEA2-202ENST00000343484 MYT1LQ9UL68 1186 aa41.81■■■■■ 4.28
TCEA2-202ENST00000343484 ABCC1P33527 1531 aa41.79■■■■■ 4.28
TCEA2-202ENST00000343484 ARHGEF12Q9NZN5 1544 aa41.78■■■■■ 4.28
TCEA2-202ENST00000343484 TRAPPC8Q9Y2L5 1435 aa41.76■■■■■ 4.28
TCEA2-202ENST00000343484 APLP2Q06481 763 aa41.73■■■■■ 4.27
TCEA2-202ENST00000343484 LRRC9Q6ZRR7 1453 aa41.72■■■■■ 4.27
TCEA2-202ENST00000343484 SAMD9LQ8IVG5 1584 aa41.72■■■■■ 4.27
TCEA2-202ENST00000343484 MAP3K1Q13233 1512 aa41.72■■■■■ 4.27
TCEA2-202ENST00000343484 NCOA2Q15596 1464 aa41.72■■■■■ 4.27
TCEA2-202ENST00000343484 KDM5CP41229 1560 aa41.71■■■■■ 4.27
TCEA2-202ENST00000343484 HNRNPMP52272 730 aaKnown RBP eCLIP41.71■■■■■ 4.271e-6■■■■□ 22.9
TCEA2-202ENST00000343484 SUPT6HQ7KZ85 1726 aaKnown RBP41.71■■■■■ 4.27
TCEA2-202ENST00000343484 ITSN2Q9NZM3 1697 aa41.71■■■■■ 4.27
TCEA2-202ENST00000343484 KANK4Q5T7N3 995 aaPredicted RBP41.69■■■■■ 4.26
TCEA2-202ENST00000343484 ATP10AO60312 1499 aa41.67■■■■■ 4.26
TCEA2-202ENST00000343484 PLEKHH2Q8IVE3 1493 aa41.66■■■■■ 4.26
TCEA2-202ENST00000343484 SYCP2Q9BX26 1530 aa41.65■■■■■ 4.26
TCEA2-202ENST00000343484 KIAA1107Q9UPP5 1409 aa41.64■■■■■ 4.26
TCEA2-202ENST00000343484 HECW2Q9P2P5 1572 aa41.63■■■■■ 4.26
TCEA2-202ENST00000343484 MLH3Q9UHC1 1453 aa41.63■■■■■ 4.25
TCEA2-202ENST00000343484 ZNF644Q9H582 1327 aaPredicted RBP41.63■■■■■ 4.25
TCEA2-202ENST00000343484 C9orf84Q5VXU9 1444 aa41.61■■■■■ 4.25
TCEA2-202ENST00000343484 BCORL1Q5H9F3 1711 aa41.59■■■■■ 4.25
TCEA2-202ENST00000343484 ADAMTSL3P82987 1691 aa41.57■■■■■ 4.25
TCEA2-202ENST00000343484 SPAG9O60271 1321 aaKnown RBP41.55■■■■■ 4.24
TCEA2-202ENST00000343484 MLECQ14165 292 aa41.55■■■■■ 4.24
TCEA2-202ENST00000343484 SIGLEC1Q9BZZ2 1709 aa41.52■■■■■ 4.24
TCEA2-202ENST00000343484 DIP2CQ9Y2E4 1556 aa41.5■■■■■ 4.23
TCEA2-202ENST00000343484 ABCA6Q8N139 1617 aa41.47■■■■■ 4.23
TCEA2-202ENST00000343484 KIDINS220Q9ULH0 1771 aa41.46■■■■■ 4.23
TCEA2-202ENST00000343484 MADDQ8WXG6 1647 aa41.45■■■■■ 4.23
TCEA2-202ENST00000343484 PTPRMP28827 1452 aa41.44■■■■■ 4.22
TCEA2-202ENST00000343484 MBD5Q9P267 1494 aa41.44■■■■■ 4.22
TCEA2-202ENST00000343484 CAMSAP2Q08AD1 1489 aa41.42■■■■■ 4.22
TCEA2-202ENST00000343484 REREQ9P2R6 1566 aa41.38■■■■■ 4.22
TCEA2-202ENST00000343484 ATP7AQ04656 1500 aa41.37■■■■■ 4.21
TCEA2-202ENST00000343484 MYOM3Q5VTT5 1437 aa41.36■■■■■ 4.21
TCEA2-202ENST00000343484 RSPH4AQ5TD94 716 aa41.36■■■■■ 4.21
TCEA2-202ENST00000343484 RIMS1Q86UR5 1692 aaKnown RBP41.33■■■■■ 4.21
TCEA2-202ENST00000343484 INO80Q9ULG1 1556 aaPredicted RBP41.32■■■■■ 4.2
TCEA2-202ENST00000343484 MIA2Q96PC5 1412 aa41.31■■■■■ 4.2
TCEA2-202ENST00000343484 CCDC141Q6ZP82 1450 aa41.3■■■■■ 4.2
TCEA2-202ENST00000343484 AGLP35573 1532 aa41.29■■■■■ 4.2
TCEA2-202ENST00000343484 PLPPR3Q6T4P5 718 aa41.29■■■■■ 4.2
TCEA2-202ENST00000343484 TSPY4P0CV99 314 aa41.25■■■■■ 4.19
TCEA2-202ENST00000343484 TSPY10P0CW01 314 aa41.25■■■■■ 4.19
TCEA2-202ENST00000343484 RTEL1-TNFRSF6BF6WH68 1400 aa41.25■■■■■ 4.19
TCEA2-202ENST00000343484 FER1L4A9Z1Z3 1794 aa41.24■■■■■ 4.19
TCEA2-202ENST00000343484 A2MP01023 1474 aa41.22■■■■■ 4.19
TCEA2-202ENST00000343484 ARHGEF5Q12774 1597 aa41.2■■■■■ 4.19
TCEA2-202ENST00000343484 ESF1Q9H501 851 aaKnown RBP41.19■■■■■ 4.18
TCEA2-202ENST00000343484 ADGBQ8N7X0 1667 aa41.12■■■■■ 4.17
TCEA2-202ENST00000343484 PLXNC1O60486 1568 aa41.1■■■■■ 4.17
TCEA2-202ENST00000343484 FGD6Q6ZV73 1430 aa41.1■■■■■ 4.17
TCEA2-202ENST00000343484 CEBPAP49715 358 aaPredicted RBP41.09■■■■■ 4.17
TCEA2-202ENST00000343484 DHX29Q7Z478 1369 aaKnown RBP41.09■■■■■ 4.17
TCEA2-202ENST00000343484 PTPN23Q9H3S7 1636 aa41.07■■■■■ 4.17
TCEA2-202ENST00000343484 GGT6Q6P531 493 aa41.06■■■■■ 4.16
TCEA2-202ENST00000343484 CNTLNQ9NXG0 1405 aa40.99■■■■■ 4.15
TCEA2-202ENST00000343484 TCOF1Q13428 1488 aaKnown RBP40.97■■■■■ 4.15
TCEA2-202ENST00000343484 KIF3BO15066 747 aa40.97■■■■■ 4.15
TCEA2-202ENST00000343484 MAST1Q9Y2H9 1570 aa40.97■■■■■ 4.15
TCEA2-202ENST00000343484 PPARGC1BQ86YN6 1023 aaKnown RBP40.95■■■■■ 4.15
TCEA2-202ENST00000343484 ABCC5O15440 1437 aa40.94■■■■■ 4.14
TCEA2-202ENST00000343484 PPP6R1Q9UPN7 881 aa40.92■■■■■ 4.14
TCEA2-202ENST00000343484 FAM50AQ14320 339 aaKnown RBP40.91■■■■■ 4.14
TCEA2-202ENST00000343484 LMTK3Q96Q04 1460 aa40.9■■■■■ 4.14
TCEA2-202ENST00000343484 DAPK1P53355 1430 aa40.89■■■■■ 4.14
TCEA2-202ENST00000343484 ZMYM3Q14202 1370 aa40.86■■■■■ 4.13
TCEA2-202ENST00000343484 C3P01024 1663 aa40.86■■■■■ 4.13
TCEA2-202ENST00000343484 SHANK2Q9UPX8 1470 aa40.85■■■■■ 4.13
TCEA2-202ENST00000343484 DNMT1P26358 1616 aaKnown RBP40.84■■■■■ 4.13
TCEA2-202ENST00000343484 RRP7BPQ9NSQ0 103 aa40.81■■■■■ 4.12
TCEA2-202ENST00000343484 CHIC2Q9UKJ5 165 aa40.81■■■■■ 4.12
TCEA2-202ENST00000343484 CROCC2H7BZ55 1655 aa40.81■■■■■ 4.12
TCEA2-202ENST00000343484 CLTCQ00610 1675 aaKnown RBP40.81■■■■■ 4.12
TCEA2-202ENST00000343484 HSPA2P54652 639 aa40.8■■■■■ 4.12
TCEA2-202ENST00000343484 MROH2AA6NES4 1674 aa40.79■■■■■ 4.12
TCEA2-202ENST00000343484 KIF15Q9NS87 1388 aa40.77■■■■■ 4.12
TCEA2-202ENST00000343484 SETD1BQ9UPS6 1966 aaKnown RBP40.77■■■■■ 4.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms