RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 EIF3AQ14152 1382 aaKnown RBP10.82□□□□□ -0.68
PRDM2-203ENST00000343137 FRAT1Q92837 279 aaPredicted RBP10.81□□□□□ -0.68
PRDM2-203ENST00000343137 NUP155O75694 1391 aa10.81□□□□□ -0.68
PRDM2-203ENST00000343137 DEKP35659 375 aaKnown RBP10.8□□□□□ -0.68
PRDM2-203ENST00000343137 POGKQ9P215 609 aa10.8□□□□□ -0.68
PRDM2-203ENST00000343137 HAP1P54257 671 aaPredicted RBP10.8□□□□□ -0.68
PRDM2-203ENST00000343137 NEUROD2Q15784 382 aa10.8□□□□□ -0.68
PRDM2-203ENST00000343137 L3MBTL2Q969R5 705 aa10.8□□□□□ -0.68
PRDM2-203ENST00000343137 KIF15Q9NS87 1388 aa10.79□□□□□ -0.68
PRDM2-203ENST00000343137 PTMSP20962 102 aa10.79□□□□□ -0.68
PRDM2-203ENST00000343137 HSCBQ8IWL3 235 aa10.79□□□□□ -0.68
PRDM2-203ENST00000343137 CUX1P39880 1505 aa10.79□□□□□ -0.68
PRDM2-203ENST00000343137 TDRD9Q8NDG6 1382 aaKnown RBP10.79□□□□□ -0.68
PRDM2-203ENST00000343137 HSP90AB1P08238 724 aaKnown RBP10.79□□□□□ -0.68
PRDM2-203ENST00000343137 MORC1Q86VD1 984 aa10.79□□□□□ -0.68
PRDM2-203ENST00000343137 ERICH3Q5RHP9 1530 aa10.79□□□□□ -0.68
PRDM2-203ENST00000343137 SENP3-EIF4A1A0A087X0R7 540 aa10.78□□□□□ -0.68
PRDM2-203ENST00000343137 NLRP13Q86W25 1043 aa10.78□□□□□ -0.68
PRDM2-203ENST00000343137 PTMAP06454 111 aaKnown RBP10.77□□□□□ -0.69
PRDM2-203ENST00000343137 FOXD1Q16676 465 aa10.77□□□□□ -0.69
PRDM2-203ENST00000343137 IPO8O15397 1037 aaKnown RBP10.76□□□□□ -0.69
PRDM2-203ENST00000343137 IPO9Q96P70 1041 aaKnown RBP10.76□□□□□ -0.69
PRDM2-203ENST00000343137 ZBED9Q6R2W3 1325 aa10.75□□□□□ -0.69
PRDM2-203ENST00000343137 U2SURPO15042 1029 aaKnown RBP10.75□□□□□ -0.69
PRDM2-203ENST00000343137 MYBBP1AQ9BQG0 1328 aaKnown RBP10.75□□□□□ -0.69
PRDM2-203ENST00000343137 CALD1Q05682 793 aaKnown RBP10.75□□□□□ -0.69
PRDM2-203ENST00000343137 PMFBP1Q8TBY8 1022 aa10.75□□□□□ -0.69
PRDM2-203ENST00000343137 FANCD2Q9BXW9 1451 aa10.74□□□□□ -0.69
PRDM2-203ENST00000343137 EFCAB2Q5VUJ9 269 aa10.74□□□□□ -0.69
PRDM2-203ENST00000343137 RWDD1Q9H446 243 aaPredicted RBP10.74□□□□□ -0.69
PRDM2-203ENST00000343137 HDGFP51858 240 aaKnown RBP10.74□□□□□ -0.69
PRDM2-203ENST00000343137 TNNT2P45379 298 aaPredicted RBP10.72□□□□□ -0.69
PRDM2-203ENST00000343137 GOLGA2Q08379 1002 aa10.72□□□□□ -0.69
PRDM2-203ENST00000343137 UACAQ9BZF9 1416 aa10.72□□□□□ -0.69
PRDM2-203ENST00000343137 ZRSR1Q15695 479 aaKnown RBP10.71□□□□□ -0.69
PRDM2-203ENST00000343137 NAP1L5Q96NT1 182 aaPredicted RBP10.71□□□□□ -0.69
PRDM2-203ENST00000343137 RRBP1Q9P2E9 1410 aaKnown RBP10.71□□□□□ -0.69
PRDM2-203ENST00000343137 MCCP23508 829 aa10.71□□□□□ -0.69
PRDM2-203ENST00000343137 PRKRIP1Q9H875 184 aaPredicted RBP10.71□□□□□ -0.69
PRDM2-203ENST00000343137 LRRC9Q6ZRR7 1453 aa10.71□□□□□ -0.69
PRDM2-203ENST00000343137 FGD6Q6ZV73 1430 aa10.71□□□□□ -0.69
PRDM2-203ENST00000343137 IGF1RP08069 1367 aa10.71□□□□□ -0.7
PRDM2-203ENST00000343137 HDGFL2Q7Z4V5 671 aaPredicted RBP10.71□□□□□ -0.7
PRDM2-203ENST00000343137 USP35Q9P2H5 1018 aa10.71□□□□□ -0.7
PRDM2-203ENST00000343137 FANCIQ9NVI1 1328 aa10.7□□□□□ -0.7
PRDM2-203ENST00000343137 PLPPR3Q6T4P5 718 aa10.7□□□□□ -0.7
PRDM2-203ENST00000343137 C14orf37Q86TY3 774 aa10.7□□□□□ -0.7
PRDM2-203ENST00000343137 MYOM3Q5VTT5 1437 aa10.7□□□□□ -0.7
PRDM2-203ENST00000343137 FGD5Q6ZNL6 1462 aa10.69□□□□□ -0.7
PRDM2-203ENST00000343137 SRPK2P78362 688 aaKnown RBP10.69□□□□□ -0.7
PRDM2-203ENST00000343137 GBP4Q96PP9 640 aa10.69□□□□□ -0.7
PRDM2-203ENST00000343137 DNTTIP2Q5QJE6 756 aaKnown RBP10.68□□□□□ -0.7
PRDM2-203ENST00000343137 CCDC144AA2RUR9 1427 aa10.68□□□□□ -0.7
PRDM2-203ENST00000343137 CASKIN1Q8WXD9 1431 aa10.68□□□□□ -0.7
PRDM2-203ENST00000343137 GOLGA6L6A8MZA4 724 aa10.67□□□□□ -0.7
PRDM2-203ENST00000343137 NCAPD3P42695 1498 aa10.67□□□□□ -0.7
PRDM2-203ENST00000343137 USP47Q96K76 1375 aa10.67□□□□□ -0.7
PRDM2-203ENST00000343137 FYCO1Q9BQS8 1478 aa10.67□□□□□ -0.7
PRDM2-203ENST00000343137 NGEFQ8N5V2 710 aa10.67□□□□□ -0.7
PRDM2-203ENST00000343137 CENPQQ7L2Z9 268 aaPredicted RBP10.66□□□□□ -0.7
PRDM2-203ENST00000343137 CNTLNQ9NXG0 1405 aa10.66□□□□□ -0.7
PRDM2-203ENST00000343137 ZBTB7CA1YPR0 619 aa10.65□□□□□ -0.7
PRDM2-203ENST00000343137 EFCAB5A4FU69 1503 aa10.65□□□□□ -0.7
PRDM2-203ENST00000343137 CENPJQ9HC77 1338 aaPredicted RBP10.65□□□□□ -0.7
PRDM2-203ENST00000343137 MSNP26038 577 aaKnown RBP10.65□□□□□ -0.71
PRDM2-203ENST00000343137 CHMP4AQ9BY43 222 aa10.65□□□□□ -0.71
PRDM2-203ENST00000343137 GAPVD1Q14C86 1478 aa10.65□□□□□ -0.71
PRDM2-203ENST00000343137 U2AF1L5P0DN76 240 aaPredicted RBP10.64□□□□□ -0.71
PRDM2-203ENST00000343137 U2AF1Q01081 240 aaKnown RBP eCLIP10.64□□□□□ -0.71
PRDM2-203ENST00000343137 RTN4Q9NQC3 1192 aaKnown RBP10.64□□□□□ -0.71
PRDM2-203ENST00000343137 RRP1P56182 461 aaKnown RBP10.64□□□□□ -0.71
PRDM2-203ENST00000343137 OS9Q13438 667 aaPredicted RBP10.64□□□□□ -0.71
PRDM2-203ENST00000343137 MIA2Q96PC5 1412 aa10.64□□□□□ -0.71
PRDM2-203ENST00000343137 HNRNPMP52272 730 aaKnown RBP eCLIP10.64□□□□□ -0.71
PRDM2-203ENST00000343137 SYNJ1O43426 1573 aa10.64□□□□□ -0.71
PRDM2-203ENST00000343137 CCDC7Q96M83 1385 aa10.63□□□□□ -0.71
PRDM2-203ENST00000343137 NRDCO43847 1150 aa10.63□□□□□ -0.71
PRDM2-203ENST00000343137 TOP2BQ02880 1626 aa10.63□□□□□ -0.71
PRDM2-203ENST00000343137 SENP3Q9H4L4 574 aaPredicted RBP10.63□□□□□ -0.71
PRDM2-203ENST00000343137 SPAG9O60271 1321 aaKnown RBP10.63□□□□□ -0.71
PRDM2-203ENST00000343137 TERF2IPQ9NYB0 399 aa10.63□□□□□ -0.71
PRDM2-203ENST00000343137 ST20-MTHFSA0A0A6YYL1 179 aa10.62□□□□□ -0.71
PRDM2-203ENST00000343137 ITPRIPQ8IWB1 547 aa10.62□□□□□ -0.71
PRDM2-203ENST00000343137 STAC3Q96MF2 364 aa10.62□□□□□ -0.71
PRDM2-203ENST00000343137 RTF1Q92541 710 aaKnown RBP10.62□□□□□ -0.71
PRDM2-203ENST00000343137 JPH4Q96JJ6 628 aa10.61□□□□□ -0.71
PRDM2-203ENST00000343137 ARAP1Q96P48 1450 aa10.61□□□□□ -0.71
PRDM2-203ENST00000343137 CHAF1AQ13111 956 aaPredicted RBP10.61□□□□□ -0.71
PRDM2-203ENST00000343137 FAM161AQ3B820 660 aa10.61□□□□□ -0.71
PRDM2-203ENST00000343137 E9PSI1 815 aa10.61□□□□□ -0.71
PRDM2-203ENST00000343137 LMOD3Q0VAK6 560 aa10.61□□□□□ -0.71
PRDM2-203ENST00000343137 CDK11BP21127 795 aaKnown RBP10.61□□□□□ -0.71
PRDM2-203ENST00000343137 KCNJ4P48050 445 aa10.61□□□□□ -0.71
PRDM2-203ENST00000343137 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
PRDM2-203ENST00000343137 PRXQ9BXM0 1461 aa10.6□□□□□ -0.71
PRDM2-203ENST00000343137 PDE4AP27815 886 aa10.6□□□□□ -0.71
PRDM2-203ENST00000343137 PANK3Q9H999 370 aa10.6□□□□□ -0.71
PRDM2-203ENST00000343137 SMC4Q9NTJ3 1288 aa10.6□□□□□ -0.71
PRDM2-203ENST00000343137 CGNL1Q0VF96 1302 aa10.59□□□□□ -0.71
PRDM2-203ENST00000343137 GOLGA6L4A6NEF3 574 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms