RNA–Protein interactions for RNA: ENST00000340871.8

NVL-202, Transcript of nuclear VCP-like, humanhuman

TSL 2 BASIC

Gene NVL, Length 2,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-202ENST00000340871 GLI2P10070 1586 aa13.16□□□□□ -0.3
NVL-202ENST00000340871 ARID3CA6NKF2 412 aa13.15□□□□□ -0.3
NVL-202ENST00000340871 ABCA9Q8IUA7 1624 aa13.14□□□□□ -0.31
NVL-202ENST00000340871 ARAP3Q8WWN8 1544 aa13.14□□□□□ -0.31
NVL-202ENST00000340871 ITSN2Q9NZM3 1697 aa13.14□□□□□ -0.31
NVL-202ENST00000340871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.13□□□□□ -0.31
NVL-202ENST00000340871 NPM2Q86SE8 214 aaKnown RBP13.13□□□□□ -0.31
NVL-202ENST00000340871 MIA2Q96PC5 1412 aa13.13□□□□□ -0.31
NVL-202ENST00000340871 MYOM3Q5VTT5 1437 aa13.13□□□□□ -0.31
NVL-202ENST00000340871 RRBP1Q9P2E9 1410 aaKnown RBP13.11□□□□□ -0.31
NVL-202ENST00000340871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.11□□□□□ -0.31
NVL-202ENST00000340871 PHLDB1Q86UU1 1377 aa13.1□□□□□ -0.31
NVL-202ENST00000340871 PREX2Q70Z35 1606 aa13.1□□□□□ -0.31
NVL-202ENST00000340871 TTC37Q6PGP7 1564 aa13.1□□□□□ -0.31
NVL-202ENST00000340871 CCNB3Q8WWL7 1395 aa13.1□□□□□ -0.31
NVL-202ENST00000340871 GPATCH8Q9UKJ3 1502 aaKnown RBP13.1□□□□□ -0.31
NVL-202ENST00000340871 DIP2BQ9P265 1576 aa13.09□□□□□ -0.31
NVL-202ENST00000340871 TCOF1Q13428 1488 aaKnown RBP13.09□□□□□ -0.31
NVL-202ENST00000340871 CDC42BPAQ5VT25 1732 aa13.09□□□□□ -0.31
NVL-202ENST00000340871 MYO5CQ9NQX4 1742 aa13.09□□□□□ -0.31
NVL-202ENST00000340871 GTF3C3Q9Y5Q9 886 aa13.09□□□□□ -0.31
NVL-202ENST00000340871 FGD6Q6ZV73 1430 aa13.08□□□□□ -0.32
NVL-202ENST00000340871 PLCH2O75038 1416 aa13.08□□□□□ -0.32
NVL-202ENST00000340871 MAP3K4Q9Y6R4 1608 aa13.07□□□□□ -0.32
NVL-202ENST00000340871 PPARGC1BQ86YN6 1023 aaKnown RBP13.05□□□□□ -0.32
NVL-202ENST00000340871 CFAP74Q9C0B2 1584 aa13.05□□□□□ -0.32
NVL-202ENST00000340871 CDC42BPBQ9Y5S2 1711 aa13.05□□□□□ -0.32
NVL-202ENST00000340871 SENP3Q9H4L4 574 aaPredicted RBP13.04□□□□□ -0.32
NVL-202ENST00000340871 PTPN23Q9H3S7 1636 aa13.04□□□□□ -0.32
NVL-202ENST00000340871 KCNH8Q96L42 1107 aa13.04□□□□□ -0.32
NVL-202ENST00000340871 PLEKHH2Q8IVE3 1493 aa13.03□□□□□ -0.32
NVL-202ENST00000340871 TRIM26Q12899 539 aaPredicted RBP13.03□□□□□ -0.32
NVL-202ENST00000340871 CD109Q6YHK3 1445 aa13.02□□□□□ -0.32
NVL-202ENST00000340871 KIF13AQ9H1H9 1805 aa13.02□□□□□ -0.33
NVL-202ENST00000340871 ARHGAP5Q13017 1502 aa13.01□□□□□ -0.33
NVL-202ENST00000340871 UBE2Q2Q8WVN8 375 aa13.01□□□□□ -0.33
NVL-202ENST00000340871 CFDP1Q9UEE9 299 aaPredicted RBP13.01□□□□□ -0.33
NVL-202ENST00000340871 KIAA1107Q9UPP5 1409 aa13.01□□□□□ -0.33
NVL-202ENST00000340871 NEO1Q92859 1461 aa13.01□□□□□ -0.33
NVL-202ENST00000340871 CAMSAP2Q08AD1 1489 aa13□□□□□ -0.33
NVL-202ENST00000340871 ARHGEF5Q12774 1597 aa12.99□□□□□ -0.33
NVL-202ENST00000340871 SAMD9LQ8IVG5 1584 aa12.99□□□□□ -0.33
NVL-202ENST00000340871 EFCAB2Q5VUJ9 269 aa12.99□□□□□ -0.33
NVL-202ENST00000340871 TEX14Q8IWB6 1497 aa12.98□□□□□ -0.33
NVL-202ENST00000340871 ABCC1P33527 1531 aa12.98□□□□□ -0.33
NVL-202ENST00000340871 PDIA4P13667 645 aaKnown RBP12.98□□□□□ -0.33
NVL-202ENST00000340871 C14orf37Q86TY3 774 aa12.98□□□□□ -0.33
NVL-202ENST00000340871 FANCAO15360 1455 aa12.98□□□□□ -0.33
NVL-202ENST00000340871 FAM69CQ0P6D2 419 aa12.97□□□□□ -0.33
NVL-202ENST00000340871 RSPH4AQ5TD94 716 aa12.97□□□□□ -0.33
NVL-202ENST00000340871 DNMT1P26358 1616 aaKnown RBP12.97□□□□□ -0.33
NVL-202ENST00000340871 PPRC1Q5VV67 1664 aaKnown RBP12.97□□□□□ -0.33
NVL-202ENST00000340871 MBD5Q9P267 1494 aa12.95□□□□□ -0.34
NVL-202ENST00000340871 SHANK2Q9UPX8 1470 aa12.95□□□□□ -0.34
NVL-202ENST00000340871 AKNAQ7Z591 1439 aa12.94□□□□□ -0.34
NVL-202ENST00000340871 CROCC2H7BZ55 1655 aa12.94□□□□□ -0.34
NVL-202ENST00000340871 MAST1Q9Y2H9 1570 aa12.93□□□□□ -0.34
NVL-202ENST00000340871 CCDC141Q6ZP82 1450 aa12.93□□□□□ -0.34
NVL-202ENST00000340871 DAPK1P53355 1430 aa12.92□□□□□ -0.34
NVL-202ENST00000340871 SYCP2Q9BX26 1530 aa12.92□□□□□ -0.34
NVL-202ENST00000340871 ADGRL1O94910 1474 aa12.92□□□□□ -0.34
NVL-202ENST00000340871 ABCC5O15440 1437 aa12.91□□□□□ -0.34
NVL-202ENST00000340871 FAM50AQ14320 339 aaKnown RBP12.91□□□□□ -0.34
NVL-202ENST00000340871 ARHGEF12Q9NZN5 1544 aa12.91□□□□□ -0.34
NVL-202ENST00000340871 ZNF644Q9H582 1327 aaPredicted RBP12.9□□□□□ -0.34
NVL-202ENST00000340871 ADGRL2O95490 1459 aa12.9□□□□□ -0.34
NVL-202ENST00000340871 ROCK1Q13464 1354 aa12.9□□□□□ -0.35
NVL-202ENST00000340871 FBXO3Q9UK99 471 aa12.89□□□□□ -0.35
NVL-202ENST00000340871 ZNF777Q9ULD5 760 aaPredicted RBP12.89□□□□□ -0.35
NVL-202ENST00000340871 RTEL1-TNFRSF6BF6WH68 1400 aa12.89□□□□□ -0.35
NVL-202ENST00000340871 SCAPERQ9BY12 1400 aa12.89□□□□□ -0.35
NVL-202ENST00000340871 KDM5CP41229 1560 aa12.88□□□□□ -0.35
NVL-202ENST00000340871 ADGBQ8N7X0 1667 aa12.88□□□□□ -0.35
NVL-202ENST00000340871 POGZQ7Z3K3 1410 aa12.88□□□□□ -0.35
NVL-202ENST00000340871 ZNF518AQ6AHZ1 1483 aa12.88□□□□□ -0.35
NVL-202ENST00000340871 DENND4BO75064 1496 aaPredicted RBP12.88□□□□□ -0.35
NVL-202ENST00000340871 PTPRKQ15262 1439 aa12.86□□□□□ -0.35
NVL-202ENST00000340871 TSPOAP1O95153 1857 aa12.86□□□□□ -0.35
NVL-202ENST00000340871 PLXNC1O60486 1568 aa12.86□□□□□ -0.35
NVL-202ENST00000340871 TRAPPC8Q9Y2L5 1435 aa12.86□□□□□ -0.35
NVL-202ENST00000340871 RICTORQ6R327 1708 aa12.86□□□□□ -0.35
NVL-202ENST00000340871 INO80Q9ULG1 1556 aaPredicted RBP12.85□□□□□ -0.35
NVL-202ENST00000340871 ZMYM4Q5VZL5 1548 aa12.85□□□□□ -0.35
NVL-202ENST00000340871 C9orf84Q5VXU9 1444 aa12.85□□□□□ -0.35
NVL-202ENST00000340871 HNRNPMP52272 730 aaKnown RBP eCLIP12.85□□□□□ -0.35
NVL-202ENST00000340871 MLH3Q9UHC1 1453 aa12.84□□□□□ -0.35
NVL-202ENST00000340871 TSPY4P0CV99 314 aa12.84□□□□□ -0.35
NVL-202ENST00000340871 TSPY10P0CW01 314 aa12.84□□□□□ -0.35
NVL-202ENST00000340871 ACIN1Q9UKV3 1341 aaKnown RBP12.84□□□□□ -0.35
NVL-202ENST00000340871 GCC2Q8IWJ2 1684 aa12.83□□□□□ -0.35
NVL-202ENST00000340871 HFM1A2PYH4 1435 aa12.83□□□□□ -0.36
NVL-202ENST00000340871 FRMPD1Q5SYB0 1578 aa12.83□□□□□ -0.36
NVL-202ENST00000340871 MAGI2Q86UL8 1455 aa12.83□□□□□ -0.36
NVL-202ENST00000340871 ANKRD30AQ9BXX3 1397 aa12.83□□□□□ -0.36
NVL-202ENST00000340871 ZFYVE16Q7Z3T8 1539 aa12.83□□□□□ -0.36
NVL-202ENST00000340871 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
NVL-202ENST00000340871 NCOA1Q15788 1441 aa12.82□□□□□ -0.36
NVL-202ENST00000340871 TRHP20396 242 aaPredicted RBP12.82□□□□□ -0.36
NVL-202ENST00000340871 HECW2Q9P2P5 1572 aa12.82□□□□□ -0.36
NVL-202ENST00000340871 HRCP23327 699 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms