RNA–Protein interactions for RNA: ENST00000340871.8

NVL-202, Transcript of nuclear VCP-like, humanhuman

TSL 2 BASIC

Gene NVL, Length 2,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-202ENST00000340871 NISCHQ9Y2I1 1504 aa20.07■□□□□ 0.8
NVL-202ENST00000340871 CCDC180Q9P1Z9 1646 aa17.74■□□□□ 0.43
NVL-202ENST00000340871 ZCCHC6Q5VYS8 1495 aaKnown RBP16.82■□□□□ 0.28
NVL-202ENST00000340871 ABCC9O60706 1549 aa16.81■□□□□ 0.28
NVL-202ENST00000340871 DCAF1Q9Y4B6 1507 aa16.72■□□□□ 0.27
NVL-202ENST00000340871 MYO15BQ96JP2 1530 aa16.67■□□□□ 0.26
NVL-202ENST00000340871 NACADO15069 1562 aa16.57■□□□□ 0.24
NVL-202ENST00000340871 RB1CC1Q8TDY2 1594 aa16.46■□□□□ 0.23
NVL-202ENST00000340871 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
NVL-202ENST00000340871 SLC24A1O60721 1099 aa16.33■□□□□ 0.2
NVL-202ENST00000340871 SCRIBQ14160 1630 aa16.08■□□□□ 0.16
NVL-202ENST00000340871 UNC13AQ9UPW8 1703 aa16.05■□□□□ 0.16
NVL-202ENST00000340871 SHROOM4Q9ULL8 1493 aa15.93■□□□□ 0.14
NVL-202ENST00000340871 BICRAQ9NZM4 1560 aa15.93■□□□□ 0.14
NVL-202ENST00000340871 PABPN1Q86U42 306 aaKnown RBP eCLIP15.72■□□□□ 0.11
NVL-202ENST00000340871 BAZ1AQ9NRL2 1556 aaPredicted RBP15.54■□□□□ 0.08
NVL-202ENST00000340871 AEBP2Q6ZN18 517 aaPredicted RBP15.53■□□□□ 0.08
NVL-202ENST00000340871 CECR2Q9BXF3 1484 aa15.51■□□□□ 0.07
NVL-202ENST00000340871 SMARCA4P51532 1647 aa15.49■□□□□ 0.07
NVL-202ENST00000340871 EIF4G1Q04637 1599 aaKnown RBP15.47■□□□□ 0.07
NVL-202ENST00000340871 CHIC1Q5VXU3 224 aa15.43■□□□□ 0.06
NVL-202ENST00000340871 MROH2BQ7Z745 1585 aa15.42■□□□□ 0.06
NVL-202ENST00000340871 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
NVL-202ENST00000340871 MYT1Q01538 1121 aa15.4■□□□□ 0.06
NVL-202ENST00000340871 PEG3Q9GZU2 1588 aa15.39■□□□□ 0.06
NVL-202ENST00000340871 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
NVL-202ENST00000340871 ATAD2BQ9ULI0 1458 aa15.29■□□□□ 0.04
NVL-202ENST00000340871 CC2D2AQ9P2K1 1620 aa15.28■□□□□ 0.04
NVL-202ENST00000340871 NCAPD3P42695 1498 aa15.27■□□□□ 0.03
NVL-202ENST00000340871 WIZO95785 1651 aa15.26■□□□□ 0.03
NVL-202ENST00000340871 HMGXB3Q12766 1538 aa15.24■□□□□ 0.03
NVL-202ENST00000340871 TTBK1Q5TCY1 1321 aaPredicted RBP15.24■□□□□ 0.03
NVL-202ENST00000340871 PELP1Q8IZL8 1130 aaKnown RBP15.22■□□□□ 0.03
NVL-202ENST00000340871 TOP2AP11388 1531 aaKnown RBP15.2■□□□□ 0.02
NVL-202ENST00000340871 BAZ1BQ9UIG0 1483 aaKnown RBP15.17■□□□□ 0.02
NVL-202ENST00000340871 SUPT5HO00267 1087 aaKnown RBP15.15■□□□□ 0.02
NVL-202ENST00000340871 DAXXQ9UER7 740 aaPredicted RBP15.12■□□□□ 0.01
NVL-202ENST00000340871 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
NVL-202ENST00000340871 CCDC88BA6NC98 1476 aa14.97□□□□□ -0.01
NVL-202ENST00000340871 PRKCSHP14314 528 aaPredicted RBP14.96□□□□□ -0.01
NVL-202ENST00000340871 APLP2Q06481 763 aa14.92□□□□□ -0.02
NVL-202ENST00000340871 CFTRP13569 1480 aa14.82□□□□□ -0.04
NVL-202ENST00000340871 LAMC3Q9Y6N6 1575 aa14.81□□□□□ -0.04
NVL-202ENST00000340871 CADPSQ9ULU8 1353 aa14.8□□□□□ -0.04
NVL-202ENST00000340871 ERICH6Q7L0X2 663 aa14.78□□□□□ -0.04
NVL-202ENST00000340871 PRDM2Q13029 1718 aa14.78□□□□□ -0.04
NVL-202ENST00000340871 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
NVL-202ENST00000340871 NESP48681 1621 aa14.66□□□□□ -0.06
NVL-202ENST00000340871 FANCD2Q9BXW9 1451 aa14.61□□□□□ -0.07
NVL-202ENST00000340871 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
NVL-202ENST00000340871 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
NVL-202ENST00000340871 ABCC8Q09428 1581 aa14.53□□□□□ -0.08
NVL-202ENST00000340871 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
NVL-202ENST00000340871 WRNQ14191 1432 aaPredicted RBP eCLIP14.51□□□□□ -0.09
NVL-202ENST00000340871 BIVM-ERCC5R4GMW8 1640 aa14.5□□□□□ -0.09
NVL-202ENST00000340871 MRC2Q9UBG0 1479 aa14.49□□□□□ -0.09
NVL-202ENST00000340871 DNMBPQ6XZF7 1577 aa14.48□□□□□ -0.09
NVL-202ENST00000340871 TOP2BQ02880 1626 aa14.48□□□□□ -0.09
NVL-202ENST00000340871 ERCC6Q03468 1493 aa14.48□□□□□ -0.09
NVL-202ENST00000340871 EHMT2Q96KQ7 1210 aa14.47□□□□□ -0.09
NVL-202ENST00000340871 CUX1P39880 1505 aa14.46□□□□□ -0.09
NVL-202ENST00000340871 THOC2Q8NI27 1593 aaKnown RBP14.45□□□□□ -0.1
NVL-202ENST00000340871 WDR62O43379 1518 aa14.45□□□□□ -0.1
NVL-202ENST00000340871 SYNJ1O43426 1573 aa14.44□□□□□ -0.1
NVL-202ENST00000340871 URB2Q14146 1524 aaKnown RBP14.44□□□□□ -0.1
NVL-202ENST00000340871 TOPBP1Q92547 1522 aa14.43□□□□□ -0.1
NVL-202ENST00000340871 PLPPR3Q6T4P5 718 aa14.4□□□□□ -0.1
NVL-202ENST00000340871 TRIM41Q8WV44 630 aa14.36□□□□□ -0.11
NVL-202ENST00000340871 RTN4Q9NQC3 1192 aaKnown RBP14.34□□□□□ -0.11
NVL-202ENST00000340871 FGD5Q6ZNL6 1462 aa14.34□□□□□ -0.11
NVL-202ENST00000340871 POLA1P09884 1462 aaPredicted RBP14.33□□□□□ -0.12
NVL-202ENST00000340871 CUX2O14529 1486 aa14.3□□□□□ -0.12
NVL-202ENST00000340871 WDR97A6NE52 1622 aa14.29□□□□□ -0.12
NVL-202ENST00000340871 IFT140Q96RY7 1462 aa14.28□□□□□ -0.12
NVL-202ENST00000340871 ABCA10Q8WWZ4 1543 aa14.27□□□□□ -0.12
NVL-202ENST00000340871 TARBP1Q13395 1621 aaKnown RBP14.27□□□□□ -0.13
NVL-202ENST00000340871 SOGA1O94964 1423 aa14.26□□□□□ -0.13
NVL-202ENST00000340871 EEA1Q15075 1411 aa14.24□□□□□ -0.13
NVL-202ENST00000340871 RAD54L2Q9Y4B4 1467 aa14.21□□□□□ -0.13
NVL-202ENST00000340871 KIF27Q86VH2 1401 aa14.19□□□□□ -0.14
NVL-202ENST00000340871 ABCA5Q8WWZ7 1642 aa14.18□□□□□ -0.14
NVL-202ENST00000340871 ERICH3Q5RHP9 1530 aa14.12□□□□□ -0.15
NVL-202ENST00000340871 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
NVL-202ENST00000340871 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
NVL-202ENST00000340871 RUSC2Q8N2Y8 1516 aa14.1□□□□□ -0.15
NVL-202ENST00000340871 ZNF608Q9ULD9 1512 aaPredicted RBP14.09□□□□□ -0.15
NVL-202ENST00000340871 GRIN2BQ13224 1484 aa14.09□□□□□ -0.15
NVL-202ENST00000340871 PBRM1Q86U86 1689 aa14.08□□□□□ -0.15
NVL-202ENST00000340871 TDRD9Q8NDG6 1382 aaKnown RBP14.08□□□□□ -0.16
NVL-202ENST00000340871 CUL7Q14999 1698 aa14.08□□□□□ -0.16
NVL-202ENST00000340871 ARXQ96QS3 562 aa14.07□□□□□ -0.16
NVL-202ENST00000340871 IGF1RP08069 1367 aa14.07□□□□□ -0.16
NVL-202ENST00000340871 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
NVL-202ENST00000340871 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.163e-7■■■■■ 28.9
NVL-202ENST00000340871 KIF21BO75037 1637 aa14.04□□□□□ -0.16
NVL-202ENST00000340871 MAGI1Q96QZ7 1491 aaPredicted RBP14.03□□□□□ -0.16
NVL-202ENST00000340871 PRXQ9BXM0 1461 aa14.03□□□□□ -0.16
NVL-202ENST00000340871 ADAMTS12P58397 1594 aa14.01□□□□□ -0.17
NVL-202ENST00000340871 FHAD1B1AJZ9 1412 aa14□□□□□ -0.17
NVL-202ENST00000340871 CARMIL1Q5VZK9 1371 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms