RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 RRP7BPQ9NSQ0 103 aa27.67■■■□□ 2.02
RUNX3-202ENST00000338888 ADAMTS12P58397 1594 aa27.67■■■□□ 2.02
RUNX3-202ENST00000338888 CCDC136Q96JN2 1154 aa27.66■■■□□ 2.02
RUNX3-202ENST00000338888 ZBTB47Q9UFB7 747 aaPredicted RBP27.66■■■□□ 2.02
RUNX3-202ENST00000338888 AKNAQ7Z591 1439 aa27.65■■■□□ 2.02
RUNX3-202ENST00000338888 NCOA1Q15788 1441 aa27.63■■■□□ 2.01
RUNX3-202ENST00000338888 L3MBTL2Q969R5 705 aa27.62■■■□□ 2.01
RUNX3-202ENST00000338888 CHIC2Q9UKJ5 165 aa27.62■■■□□ 2.01
RUNX3-202ENST00000338888 EIF4G3O43432 1585 aaKnown RBP27.62■■■□□ 2.01
RUNX3-202ENST00000338888 SNAPC4Q5SXM2 1469 aa27.62■■■□□ 2.01
RUNX3-202ENST00000338888 FBLN2P98095 1184 aa27.59■■■□□ 2.01
RUNX3-202ENST00000338888 MYOM3Q5VTT5 1437 aa27.57■■■□□ 2
RUNX3-202ENST00000338888 CNGB1Q14028 1251 aaPredicted RBP27.57■■■□□ 2
RUNX3-202ENST00000338888 DENND4BO75064 1496 aaPredicted RBP27.57■■■□□ 2
RUNX3-202ENST00000338888 SMG6Q86US8 1419 aaKnown RBP27.56■■■□□ 2
RUNX3-202ENST00000338888 FOXD1Q16676 465 aa27.54■■■□□ 2
RUNX3-202ENST00000338888 NUDCQ9Y266 331 aa27.54■■■□□ 2
RUNX3-202ENST00000338888 SAMD9Q5K651 1589 aa27.54■■■□□ 2
RUNX3-202ENST00000338888 SENP3-EIF4A1A0A087X0R7 540 aa27.53■■■□□ 2
RUNX3-202ENST00000338888 KIF7Q2M1P5 1343 aa27.52■■■□□ 2
RUNX3-202ENST00000338888 CHMP7Q8WUX9 453 aaPredicted RBP27.52■■■□□ 2
RUNX3-202ENST00000338888 SALL2Q9Y467 1007 aaPredicted RBP27.52■■■□□ 2
RUNX3-202ENST00000338888 IL27Q8NEV9 243 aa27.51■■□□□ 1.99
RUNX3-202ENST00000338888 MPHOSPH9Q99550 1183 aa27.51■■□□□ 1.99
RUNX3-202ENST00000338888 IQGAP2Q13576 1575 aa27.51■■□□□ 1.99
RUNX3-202ENST00000338888 NBPF8Q3BBV2 869 aa27.5■■□□□ 1.99
RUNX3-202ENST00000338888 RNF123Q5XPI4 1314 aa27.5■■□□□ 1.99
RUNX3-202ENST00000338888 GRIN2AQ12879 1464 aa27.45■■□□□ 1.98
RUNX3-202ENST00000338888 NPM2Q86SE8 214 aaKnown RBP27.44■■□□□ 1.98
RUNX3-202ENST00000338888 RTN4Q9NQC3 1192 aaKnown RBP27.44■■□□□ 1.98
RUNX3-202ENST00000338888 HECW1Q76N89 1606 aa27.42■■□□□ 1.98
RUNX3-202ENST00000338888 ARID3CA6NKF2 412 aa27.42■■□□□ 1.98
RUNX3-202ENST00000338888 KDM6BO15054 1643 aa27.4■■□□□ 1.98
RUNX3-202ENST00000338888 MAGI1Q96QZ7 1491 aaPredicted RBP27.4■■□□□ 1.98
RUNX3-202ENST00000338888 SUPT6HQ7KZ85 1726 aaKnown RBP27.38■■□□□ 1.97
RUNX3-202ENST00000338888 LRRIQ1Q96JM4 1722 aa27.38■■□□□ 1.97
RUNX3-202ENST00000338888 POLR3GLQ9BT43 218 aa27.37■■□□□ 1.97
RUNX3-202ENST00000338888 KIAA0586Q9BVV6 1533 aa27.37■■□□□ 1.97
RUNX3-202ENST00000338888 SPATA31E1Q6ZUB1 1445 aa27.36■■□□□ 1.97
RUNX3-202ENST00000338888 LAS1LQ9Y4W2 734 aaKnown RBP27.36■■□□□ 1.97
RUNX3-202ENST00000338888 SYNJ2O15056 1496 aa27.35■■□□□ 1.97
RUNX3-202ENST00000338888 NEFMP07197 916 aa27.33■■□□□ 1.97
RUNX3-202ENST00000338888 GCC2Q8IWJ2 1684 aa27.33■■□□□ 1.97
RUNX3-202ENST00000338888 EHBP1L1Q8N3D4 1523 aa27.32■■□□□ 1.96
RUNX3-202ENST00000338888 UGGT2Q9NYU1 1516 aa27.32■■□□□ 1.96
RUNX3-202ENST00000338888 DHX29Q7Z478 1369 aaKnown RBP27.32■■□□□ 1.96
RUNX3-202ENST00000338888 ANKRD30BQ9BXX2 1392 aa27.28■■□□□ 1.96
RUNX3-202ENST00000338888 RPRD2Q5VT52 1461 aaKnown RBP27.27■■□□□ 1.96
RUNX3-202ENST00000338888 CEP170Q5SW79 1584 aa27.27■■□□□ 1.96
RUNX3-202ENST00000338888 PNISRQ8TF01 805 aaKnown RBP27.26■■□□□ 1.95
RUNX3-202ENST00000338888 TCOF1Q13428 1488 aaKnown RBP27.26■■□□□ 1.95
RUNX3-202ENST00000338888 TEX14Q8IWB6 1497 aa27.26■■□□□ 1.95
RUNX3-202ENST00000338888 MAGI3Q5TCQ9 1506 aa27.26■■□□□ 1.95
RUNX3-202ENST00000338888 DISP1Q96F81 1524 aa27.25■■□□□ 1.95
RUNX3-202ENST00000338888 PDE4AP27815 886 aa27.24■■□□□ 1.95
RUNX3-202ENST00000338888 ARHGEF11O15085 1522 aa27.24■■□□□ 1.95
RUNX3-202ENST00000338888 EXOC6Q8TAG9 804 aa27.24■■□□□ 1.95
RUNX3-202ENST00000338888 TMC1Q8TDI8 760 aa27.23■■□□□ 1.95
RUNX3-202ENST00000338888 TCERG1O14776 1098 aaKnown RBP27.23■■□□□ 1.95
RUNX3-202ENST00000338888 USP35Q9P2H5 1018 aa27.22■■□□□ 1.95
RUNX3-202ENST00000338888 POLR1AO95602 1720 aaPredicted RBP27.22■■□□□ 1.95
RUNX3-202ENST00000338888 KIAA0556O60303 1618 aa27.21■■□□□ 1.95
RUNX3-202ENST00000338888 JPH4Q96JJ6 628 aa27.2■■□□□ 1.94
RUNX3-202ENST00000338888 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.2■■□□□ 1.94
RUNX3-202ENST00000338888 RRP1P56182 461 aaKnown RBP27.19■■□□□ 1.94
RUNX3-202ENST00000338888 SLC4A1APQ9BWU0 796 aaKnown RBP27.19■■□□□ 1.94
RUNX3-202ENST00000338888 CDK13Q14004 1512 aaKnown RBP27.18■■□□□ 1.94
RUNX3-202ENST00000338888 BACH2Q9BYV9 841 aa27.17■■□□□ 1.94
RUNX3-202ENST00000338888 EPRSP07814 1512 aaKnown RBP27.16■■□□□ 1.94
RUNX3-202ENST00000338888 ZNF326Q5BKZ1 582 aaKnown RBP27.16■■□□□ 1.94
RUNX3-202ENST00000338888 NUP160Q12769 1436 aa27.15■■□□□ 1.94
RUNX3-202ENST00000338888 MIA2Q96PC5 1412 aa27.14■■□□□ 1.94
RUNX3-202ENST00000338888 PPM1GO15355 546 aaPredicted RBP27.14■■□□□ 1.93
RUNX3-202ENST00000338888 WASHC2CQ9Y4E1 1318 aa27.14■■□□□ 1.93
RUNX3-202ENST00000338888 USP47Q96K76 1375 aa27.12■■□□□ 1.93
RUNX3-202ENST00000338888 RCAN3Q9UKA8 241 aa27.1■■□□□ 1.93
RUNX3-202ENST00000338888 BCORL1Q5H9F3 1711 aa27.09■■□□□ 1.93
RUNX3-202ENST00000338888 MS4A1P11836 297 aa27.07■■□□□ 1.92
RUNX3-202ENST00000338888 CARMIL2Q6F5E8 1435 aa27.06■■□□□ 1.92
RUNX3-202ENST00000338888 BRPF3Q9ULD4 1205 aa27.05■■□□□ 1.92
RUNX3-202ENST00000338888 LRPPRCP42704 1394 aaKnown RBP27.03■■□□□ 1.92
RUNX3-202ENST00000338888 NUP153P49790 1475 aaKnown RBP27.03■■□□□ 1.92
RUNX3-202ENST00000338888 PLB1Q6P1J6 1458 aa27.03■■□□□ 1.92
RUNX3-202ENST00000338888 SKAP1Q86WV1 359 aa27.02■■□□□ 1.92
RUNX3-202ENST00000338888 RAPGEF6Q8TEU7 1601 aa27.01■■□□□ 1.91
RUNX3-202ENST00000338888 DAPK1P53355 1430 aa27■■□□□ 1.91
RUNX3-202ENST00000338888 ARID4BQ4LE39 1312 aaPredicted RBP27■■□□□ 1.91
RUNX3-202ENST00000338888 ROCK1Q13464 1354 aa26.99■■□□□ 1.91
RUNX3-202ENST00000338888 GSE1Q14687 1217 aa26.99■■□□□ 1.91
RUNX3-202ENST00000338888 KIF15Q9NS87 1388 aa26.97■■□□□ 1.91
RUNX3-202ENST00000338888 ZNF644Q9H582 1327 aaPredicted RBP26.97■■□□□ 1.91
RUNX3-202ENST00000338888 MYBBP1AQ9BQG0 1328 aaKnown RBP26.96■■□□□ 1.91
RUNX3-202ENST00000338888 DDRGK1Q96HY6 314 aa26.96■■□□□ 1.91
RUNX3-202ENST00000338888 BRD4O60885 1362 aaPredicted RBP26.96■■□□□ 1.91
RUNX3-202ENST00000338888 ABCC5O15440 1437 aa26.95■■□□□ 1.91
RUNX3-202ENST00000338888 ROCK2O75116 1388 aaKnown RBP26.95■■□□□ 1.91
RUNX3-202ENST00000338888 CHD1O14646 1710 aa26.95■■□□□ 1.9
RUNX3-202ENST00000338888 PLIN1O60240 522 aa26.94■■□□□ 1.9
RUNX3-202ENST00000338888 MBD5Q9P267 1494 aa26.94■■□□□ 1.9
RUNX3-202ENST00000338888 PRG4Q92954 1404 aaPredicted RBP26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms