RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CAMSAP2Q08AD1 1489 aa22.15■■□□□ 1.14
CDK5RAP3-201ENST00000338399 PTPRKQ15262 1439 aa22.13■■□□□ 1.13
CDK5RAP3-201ENST00000338399 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
CDK5RAP3-201ENST00000338399 DNMT1P26358 1616 aaKnown RBP22.09■■□□□ 1.13
CDK5RAP3-201ENST00000338399 ABCA9Q8IUA7 1624 aa22.08■■□□□ 1.12
CDK5RAP3-201ENST00000338399 PLCH2O75038 1416 aa22.07■■□□□ 1.12
CDK5RAP3-201ENST00000338399 DAPK1P53355 1430 aa22.07■■□□□ 1.12
CDK5RAP3-201ENST00000338399 MAPKBP1O60336 1514 aa22.06■■□□□ 1.12
CDK5RAP3-201ENST00000338399 SAMD9LQ8IVG5 1584 aa22.06■■□□□ 1.12
CDK5RAP3-201ENST00000338399 ABCC5O15440 1437 aa22.06■■□□□ 1.12
CDK5RAP3-201ENST00000338399 CHIC2Q9UKJ5 165 aa22.05■■□□□ 1.12
CDK5RAP3-201ENST00000338399 SETD5Q9C0A6 1442 aa22.04■■□□□ 1.12
CDK5RAP3-201ENST00000338399 CCER1Q8TC90 406 aaPredicted RBP22.01■■□□□ 1.11
CDK5RAP3-201ENST00000338399 RAB3GAP2Q9H2M9 1393 aa22.01■■□□□ 1.11
CDK5RAP3-201ENST00000338399 HNRNPMP52272 730 aaKnown RBP eCLIP22■■□□□ 1.114e-8■■□□□ 12.7
CDK5RAP3-201ENST00000338399 EFCAB2Q5VUJ9 269 aa22■■□□□ 1.11
CDK5RAP3-201ENST00000338399 ARAP3Q8WWN8 1544 aa22■■□□□ 1.11
CDK5RAP3-201ENST00000338399 CROCC2H7BZ55 1655 aa21.99■■□□□ 1.11
CDK5RAP3-201ENST00000338399 HFM1A2PYH4 1435 aa21.98■■□□□ 1.11
CDK5RAP3-201ENST00000338399 RRP7BPQ9NSQ0 103 aa21.98■■□□□ 1.11
CDK5RAP3-201ENST00000338399 MBD5Q9P267 1494 aa21.97■■□□□ 1.11
CDK5RAP3-201ENST00000338399 ARHGEF5Q12774 1597 aa21.97■■□□□ 1.11
CDK5RAP3-201ENST00000338399 SYCP2Q9BX26 1530 aa21.97■■□□□ 1.11
CDK5RAP3-201ENST00000338399 HRCP23327 699 aa21.96■■□□□ 1.11
CDK5RAP3-201ENST00000338399 NAIPQ13075 1403 aa21.96■■□□□ 1.11
CDK5RAP3-201ENST00000338399 AKNAQ7Z591 1439 aa21.96■■□□□ 1.11
CDK5RAP3-201ENST00000338399 PLEKHH2Q8IVE3 1493 aa21.95■■□□□ 1.11
CDK5RAP3-201ENST00000338399 CD109Q6YHK3 1445 aa21.94■■□□□ 1.1
CDK5RAP3-201ENST00000338399 ROCK1Q13464 1354 aa21.94■■□□□ 1.1
CDK5RAP3-201ENST00000338399 FANCAO15360 1455 aa21.94■■□□□ 1.1
CDK5RAP3-201ENST00000338399 ADGBQ8N7X0 1667 aa21.94■■□□□ 1.1
CDK5RAP3-201ENST00000338399 KIAA1107Q9UPP5 1409 aa21.93■■□□□ 1.1
CDK5RAP3-201ENST00000338399 GCC2Q8IWJ2 1684 aa21.93■■□□□ 1.1
CDK5RAP3-201ENST00000338399 CCDC141Q6ZP82 1450 aa21.92■■□□□ 1.1
CDK5RAP3-201ENST00000338399 ABCC1P33527 1531 aa21.92■■□□□ 1.1
CDK5RAP3-201ENST00000338399 ARHGEF12Q9NZN5 1544 aa21.92■■□□□ 1.1
CDK5RAP3-201ENST00000338399 RSPH4AQ5TD94 716 aa21.92■■□□□ 1.1
CDK5RAP3-201ENST00000338399 TSPY4P0CV99 314 aa21.91■■□□□ 1.1
CDK5RAP3-201ENST00000338399 TSPY10P0CW01 314 aa21.91■■□□□ 1.1
CDK5RAP3-201ENST00000338399 SHANK2Q9UPX8 1470 aa21.91■■□□□ 1.1
CDK5RAP3-201ENST00000338399 C9orf84Q5VXU9 1444 aa21.89■■□□□ 1.09
CDK5RAP3-201ENST00000338399 ADGRL2O95490 1459 aa21.89■■□□□ 1.09
CDK5RAP3-201ENST00000338399 GLI2P10070 1586 aa21.89■■□□□ 1.09
CDK5RAP3-201ENST00000338399 NCOA1Q15788 1441 aa21.88■■□□□ 1.09
CDK5RAP3-201ENST00000338399 DIP2BQ9P265 1576 aa21.88■■□□□ 1.09
CDK5RAP3-201ENST00000338399 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
CDK5RAP3-201ENST00000338399 MAP3K4Q9Y6R4 1608 aa21.86■■□□□ 1.09
CDK5RAP3-201ENST00000338399 ANKRD30AQ9BXX3 1397 aa21.86■■□□□ 1.09
CDK5RAP3-201ENST00000338399 FAM69CQ0P6D2 419 aa21.86■■□□□ 1.09
CDK5RAP3-201ENST00000338399 KDM6BO15054 1643 aa21.85■■□□□ 1.09
CDK5RAP3-201ENST00000338399 TRAPPC8Q9Y2L5 1435 aa21.84■■□□□ 1.09
CDK5RAP3-201ENST00000338399 CFAP74Q9C0B2 1584 aa21.84■■□□□ 1.09
CDK5RAP3-201ENST00000338399 ADGRL1O94910 1474 aa21.84■■□□□ 1.09
CDK5RAP3-201ENST00000338399 MAST1Q9Y2H9 1570 aa21.83■■□□□ 1.08
CDK5RAP3-201ENST00000338399 SCAPERQ9BY12 1400 aa21.82■■□□□ 1.08
CDK5RAP3-201ENST00000338399 ZEB1P37275 1124 aaPredicted RBP21.81■■□□□ 1.08
CDK5RAP3-201ENST00000338399 DNAJC5Q9H3Z4 198 aa21.81■■□□□ 1.08
CDK5RAP3-201ENST00000338399 AFAP1Q8N556 730 aa21.79■■□□□ 1.08
CDK5RAP3-201ENST00000338399 KIF13AQ9H1H9 1805 aa21.77■■□□□ 1.08
CDK5RAP3-201ENST00000338399 TSPOAP1O95153 1857 aa21.77■■□□□ 1.08
CDK5RAP3-201ENST00000338399 KIF15Q9NS87 1388 aa21.77■■□□□ 1.07
CDK5RAP3-201ENST00000338399 NEO1Q92859 1461 aa21.77■■□□□ 1.07
CDK5RAP3-201ENST00000338399 ANKRD50Q9ULJ7 1429 aa21.75■■□□□ 1.07
CDK5RAP3-201ENST00000338399 SPAG9O60271 1321 aaKnown RBP21.74■■□□□ 1.07
CDK5RAP3-201ENST00000338399 TRIM52Q96A61 297 aa21.74■■□□□ 1.07
CDK5RAP3-201ENST00000338399 PLXNC1O60486 1568 aa21.74■■□□□ 1.07
CDK5RAP3-201ENST00000338399 PPRC1Q5VV67 1664 aaKnown RBP21.72■■□□□ 1.07
CDK5RAP3-201ENST00000338399 CLSPNQ9HAW4 1339 aa21.71■■□□□ 1.07
CDK5RAP3-201ENST00000338399 RTEL1-TNFRSF6BF6WH68 1400 aa21.71■■□□□ 1.07
CDK5RAP3-201ENST00000338399 ZNF518AQ6AHZ1 1483 aa21.7■■□□□ 1.06
CDK5RAP3-201ENST00000338399 ZFYVE16Q7Z3T8 1539 aa21.7■■□□□ 1.06
CDK5RAP3-201ENST00000338399 POGZQ7Z3K3 1410 aa21.68■■□□□ 1.06
CDK5RAP3-201ENST00000338399 INO80Q9ULG1 1556 aaPredicted RBP21.68■■□□□ 1.06
CDK5RAP3-201ENST00000338399 ACIN1Q9UKV3 1341 aaKnown RBP21.68■■□□□ 1.06
CDK5RAP3-201ENST00000338399 ATP7AQ04656 1500 aa21.68■■□□□ 1.06
CDK5RAP3-201ENST00000338399 MYT1LQ9UL68 1186 aa21.67■■□□□ 1.06
CDK5RAP3-201ENST00000338399 DUOX2Q9NRD8 1548 aa21.66■■□□□ 1.06
CDK5RAP3-201ENST00000338399 DENND4BO75064 1496 aaPredicted RBP21.66■■□□□ 1.06
CDK5RAP3-201ENST00000338399 TEX14Q8IWB6 1497 aa21.65■■□□□ 1.06
CDK5RAP3-201ENST00000338399 KDM5CP41229 1560 aa21.65■■□□□ 1.06
CDK5RAP3-201ENST00000338399 KIDINS220Q9ULH0 1771 aa21.64■■□□□ 1.05
CDK5RAP3-201ENST00000338399 RAPGEF3O95398 923 aa21.64■■□□□ 1.05
CDK5RAP3-201ENST00000338399 MPHOSPH9Q99550 1183 aa21.62■■□□□ 1.05
CDK5RAP3-201ENST00000338399 RICTORQ6R327 1708 aa21.62■■□□□ 1.05
CDK5RAP3-201ENST00000338399 ERBINQ96RT1 1412 aa21.6■■□□□ 1.05
CDK5RAP3-201ENST00000338399 HECW2Q9P2P5 1572 aa21.6■■□□□ 1.05
CDK5RAP3-201ENST00000338399 MLH3Q9UHC1 1453 aa21.59■■□□□ 1.05
CDK5RAP3-201ENST00000338399 PZPP20742 1482 aa21.58■■□□□ 1.04
CDK5RAP3-201ENST00000338399 SLC4A1APQ9BWU0 796 aaKnown RBP21.58■■□□□ 1.04
CDK5RAP3-201ENST00000338399 NUP155O75694 1391 aa21.57■■□□□ 1.04
CDK5RAP3-201ENST00000338399 FRMPD1Q5SYB0 1578 aa21.56■■□□□ 1.04
CDK5RAP3-201ENST00000338399 UNC13BO14795 1591 aa21.55■■□□□ 1.04
CDK5RAP3-201ENST00000338399 SIN3AQ96ST3 1273 aa21.54■■□□□ 1.04
CDK5RAP3-201ENST00000338399 KDM5DQ9BY66 1539 aa21.54■■□□□ 1.04
CDK5RAP3-201ENST00000338399 DHX29Q7Z478 1369 aaKnown RBP21.53■■□□□ 1.04
CDK5RAP3-201ENST00000338399 TRHP20396 242 aaPredicted RBP21.53■■□□□ 1.04
CDK5RAP3-201ENST00000338399 ABCA6Q8N139 1617 aa21.52■■□□□ 1.04
CDK5RAP3-201ENST00000338399 FOXD1Q16676 465 aa21.52■■□□□ 1.04
CDK5RAP3-201ENST00000338399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.52■■□□□ 1.032e-7■■□□□ 13.2
CDK5RAP3-201ENST00000338399 NEUROD1Q13562 356 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms