RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 PPRC1Q5VV67 1664 aaKnown RBP19.78■□□□□ 0.76
PRIM1-201ENST00000338193 ABCA9Q8IUA7 1624 aa19.78■□□□□ 0.76
PRIM1-201ENST00000338193 TSPOAP1O95153 1857 aa19.78■□□□□ 0.76
PRIM1-201ENST00000338193 EHBP1L1Q8N3D4 1523 aa19.78■□□□□ 0.76
PRIM1-201ENST00000338193 PPARGC1BQ86YN6 1023 aaKnown RBP19.77■□□□□ 0.76
PRIM1-201ENST00000338193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.76■□□□□ 0.75
PRIM1-201ENST00000338193 MTUS2Q5JR59 1369 aa19.76■□□□□ 0.75
PRIM1-201ENST00000338193 CDK11AQ9UQ88 783 aaPredicted RBP19.75■□□□□ 0.75
PRIM1-201ENST00000338193 NCBP3Q53F19 620 aaKnown RBP19.7■□□□□ 0.74
PRIM1-201ENST00000338193 SUPT6HQ7KZ85 1726 aaKnown RBP19.7■□□□□ 0.74
PRIM1-201ENST00000338193 CDC42BPAQ5VT25 1732 aa19.7■□□□□ 0.74
PRIM1-201ENST00000338193 CD109Q6YHK3 1445 aa19.7■□□□□ 0.74
PRIM1-201ENST00000338193 NCOA2Q15596 1464 aa19.69■□□□□ 0.74
PRIM1-201ENST00000338193 MYO5CQ9NQX4 1742 aa19.68■□□□□ 0.74
PRIM1-201ENST00000338193 CDC42BPBQ9Y5S2 1711 aa19.68■□□□□ 0.74
PRIM1-201ENST00000338193 APLP2Q06481 763 aa19.68■□□□□ 0.74
PRIM1-201ENST00000338193 PREX2Q70Z35 1606 aa19.65■□□□□ 0.74
PRIM1-201ENST00000338193 GPATCH8Q9UKJ3 1502 aaKnown RBP19.65■□□□□ 0.74
PRIM1-201ENST00000338193 PLCH2O75038 1416 aa19.62■□□□□ 0.73
PRIM1-201ENST00000338193 PHLDB1Q86UU1 1377 aa19.61■□□□□ 0.73
PRIM1-201ENST00000338193 CCNB3Q8WWL7 1395 aa19.59■□□□□ 0.73
PRIM1-201ENST00000338193 ARHGAP5Q13017 1502 aa19.58■□□□□ 0.73
PRIM1-201ENST00000338193 FANCAO15360 1455 aa19.57■□□□□ 0.72
PRIM1-201ENST00000338193 ITSN2Q9NZM3 1697 aa19.57■□□□□ 0.72
PRIM1-201ENST00000338193 SAMD9LQ8IVG5 1584 aa19.56■□□□□ 0.72
PRIM1-201ENST00000338193 ARAP3Q8WWN8 1544 aa19.56■□□□□ 0.72
PRIM1-201ENST00000338193 COL17A1Q9UMD9 1497 aaPredicted RBP19.56■□□□□ 0.72
PRIM1-201ENST00000338193 ZNF644Q9H582 1327 aaPredicted RBP19.54■□□□□ 0.72
PRIM1-201ENST00000338193 TEX14Q8IWB6 1497 aa19.53■□□□□ 0.72
PRIM1-201ENST00000338193 MYOM3Q5VTT5 1437 aa19.53■□□□□ 0.72
PRIM1-201ENST00000338193 ARHGEF12Q9NZN5 1544 aa19.52■□□□□ 0.72
PRIM1-201ENST00000338193 AKNAQ7Z591 1439 aa19.51■□□□□ 0.71
PRIM1-201ENST00000338193 NEO1Q92859 1461 aa19.51■□□□□ 0.71
PRIM1-201ENST00000338193 CFAP74Q9C0B2 1584 aa19.51■□□□□ 0.71
PRIM1-201ENST00000338193 ZNF777Q9ULD5 760 aaPredicted RBP19.5■□□□□ 0.71
PRIM1-201ENST00000338193 ABCC1P33527 1531 aa19.5■□□□□ 0.71
PRIM1-201ENST00000338193 FRMPD1Q5SYB0 1578 aa19.49■□□□□ 0.71
PRIM1-201ENST00000338193 CFDP1Q9UEE9 299 aaPredicted RBP19.49■□□□□ 0.71
PRIM1-201ENST00000338193 EFCAB2Q5VUJ9 269 aa19.48■□□□□ 0.71
PRIM1-201ENST00000338193 CAMSAP2Q08AD1 1489 aa19.48■□□□□ 0.71
PRIM1-201ENST00000338193 KDM6BO15054 1643 aa19.48■□□□□ 0.71
PRIM1-201ENST00000338193 SYCP2Q9BX26 1530 aa19.47■□□□□ 0.71
PRIM1-201ENST00000338193 FGD6Q6ZV73 1430 aa19.47■□□□□ 0.71
PRIM1-201ENST00000338193 ADGRL1O94910 1474 aa19.47■□□□□ 0.71
PRIM1-201ENST00000338193 PTPN23Q9H3S7 1636 aa19.47■□□□□ 0.71
PRIM1-201ENST00000338193 RICTORQ6R327 1708 aa19.46■□□□□ 0.71
PRIM1-201ENST00000338193 SCAPERQ9BY12 1400 aa19.45■□□□□ 0.7
PRIM1-201ENST00000338193 NPM3O75607 178 aaKnown RBP19.44■□□□□ 0.7
PRIM1-201ENST00000338193 TRAPPC8Q9Y2L5 1435 aa19.44■□□□□ 0.7
PRIM1-201ENST00000338193 RAPGEF3O95398 923 aa19.44■□□□□ 0.7
PRIM1-201ENST00000338193 HNRNPMP52272 730 aaKnown RBP eCLIP19.44■□□□□ 0.7
PRIM1-201ENST00000338193 POTEHQ6S545 545 aa19.44■□□□□ 0.7
PRIM1-201ENST00000338193 MIA2Q96PC5 1412 aa19.43■□□□□ 0.7
PRIM1-201ENST00000338193 TCOF1Q13428 1488 aaKnown RBP19.41■□□□□ 0.7
PRIM1-201ENST00000338193 MBD5Q9P267 1494 aa19.41■□□□□ 0.7
PRIM1-201ENST00000338193 POGZQ7Z3K3 1410 aa19.4■□□□□ 0.7
PRIM1-201ENST00000338193 DENND4BO75064 1496 aaPredicted RBP19.4■□□□□ 0.7
PRIM1-201ENST00000338193 AFAP1Q8N556 730 aa19.38■□□□□ 0.69
PRIM1-201ENST00000338193 KIAA1107Q9UPP5 1409 aa19.36■□□□□ 0.69
PRIM1-201ENST00000338193 KDM5CP41229 1560 aa19.36■□□□□ 0.69
PRIM1-201ENST00000338193 RRBP1Q9P2E9 1410 aaKnown RBP19.36■□□□□ 0.69
PRIM1-201ENST00000338193 PLEKHH2Q8IVE3 1493 aa19.35■□□□□ 0.69
PRIM1-201ENST00000338193 ARHGEF5Q12774 1597 aa19.34■□□□□ 0.69
PRIM1-201ENST00000338193 FAM50AQ14320 339 aaKnown RBP19.33■□□□□ 0.69
PRIM1-201ENST00000338193 DNMT1P26358 1616 aaKnown RBP19.33■□□□□ 0.69
PRIM1-201ENST00000338193 ZMYM4Q5VZL5 1548 aa19.33■□□□□ 0.68
PRIM1-201ENST00000338193 CROCC2H7BZ55 1655 aa19.33■□□□□ 0.68
PRIM1-201ENST00000338193 ZNF518AQ6AHZ1 1483 aa19.33■□□□□ 0.68
PRIM1-201ENST00000338193 U3KPZ7 1027 aaPredicted RBP19.32■□□□□ 0.68
PRIM1-201ENST00000338193 KIDINS220Q9ULH0 1771 aa19.32■□□□□ 0.68
PRIM1-201ENST00000338193 ABCC5O15440 1437 aa19.31■□□□□ 0.68
PRIM1-201ENST00000338193 CCDC141Q6ZP82 1450 aa19.31■□□□□ 0.68
PRIM1-201ENST00000338193 PTPRKQ15262 1439 aa19.31■□□□□ 0.68
PRIM1-201ENST00000338193 YEATS2Q9ULM3 1422 aa19.31■□□□□ 0.68
PRIM1-201ENST00000338193 INO80Q9ULG1 1556 aaPredicted RBP19.3■□□□□ 0.68
PRIM1-201ENST00000338193 HECW2Q9P2P5 1572 aa19.29■□□□□ 0.68
PRIM1-201ENST00000338193 DAPK1P53355 1430 aa19.29■□□□□ 0.68
PRIM1-201ENST00000338193 ZFYVE16Q7Z3T8 1539 aa19.29■□□□□ 0.68
PRIM1-201ENST00000338193 ABCA6Q8N139 1617 aa19.29■□□□□ 0.68
PRIM1-201ENST00000338193 SIGLEC1Q9BZZ2 1709 aa19.29■□□□□ 0.68
PRIM1-201ENST00000338193 DSG3P32926 999 aa19.28■□□□□ 0.68
PRIM1-201ENST00000338193 ATP7AQ04656 1500 aa19.26■□□□□ 0.67
PRIM1-201ENST00000338193 DIP2CQ9Y2E4 1556 aa19.25■□□□□ 0.67
PRIM1-201ENST00000338193 ARHGEF40Q8TER5 1519 aa19.25■□□□□ 0.67
PRIM1-201ENST00000338193 MAST1Q9Y2H9 1570 aa19.25■□□□□ 0.67
PRIM1-201ENST00000338193 MLH3Q9UHC1 1453 aa19.25■□□□□ 0.67
PRIM1-201ENST00000338193 ITGAEP38570 1179 aa19.24■□□□□ 0.67
PRIM1-201ENST00000338193 SPAG9O60271 1321 aaKnown RBP19.24■□□□□ 0.67
PRIM1-201ENST00000338193 C9orf84Q5VXU9 1444 aa19.23■□□□□ 0.67
PRIM1-201ENST00000338193 ADGBQ8N7X0 1667 aa19.23■□□□□ 0.67
PRIM1-201ENST00000338193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.23■□□□□ 0.67
PRIM1-201ENST00000338193 CHIC2Q9UKJ5 165 aa19.22■□□□□ 0.67
PRIM1-201ENST00000338193 SPINK5Q9NQ38 1064 aaPredicted RBP19.21■□□□□ 0.67
PRIM1-201ENST00000338193 SHANK2Q9UPX8 1470 aa19.2■□□□□ 0.66
PRIM1-201ENST00000338193 MAGI2Q86UL8 1455 aa19.19■□□□□ 0.66
PRIM1-201ENST00000338193 CAPN15O75808 1086 aa19.19■□□□□ 0.66
PRIM1-201ENST00000338193 MYT1LQ9UL68 1186 aa19.18■□□□□ 0.66
PRIM1-201ENST00000338193 RTEL1-TNFRSF6BF6WH68 1400 aa19.17■□□□□ 0.66
PRIM1-201ENST00000338193 PLXNC1O60486 1568 aa19.17■□□□□ 0.66
PRIM1-201ENST00000338193 RSPH4AQ5TD94 716 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms