RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 KDM6BO15054 1643 aa16.61■□□□□ 0.25
UBE2D3-202ENST00000338145 CCDC61Q9Y6R9 512 aa16.61■□□□□ 0.25
UBE2D3-202ENST00000338145 CHRM1P11229 460 aaPredicted RBP16.59■□□□□ 0.25
UBE2D3-202ENST00000338145 ILDR1Q86SU0 546 aaPredicted RBP16.59■□□□□ 0.25
UBE2D3-202ENST00000338145 ZRANB1Q9UGI0 708 aa16.59■□□□□ 0.25
UBE2D3-202ENST00000338145 RUSC2Q8N2Y8 1516 aa16.58■□□□□ 0.24
UBE2D3-202ENST00000338145 ADCY10Q96PN6 1610 aa16.56■□□□□ 0.24
UBE2D3-202ENST00000338145 ZNF579Q8NAF0 562 aaKnown RBP16.56■□□□□ 0.24
UBE2D3-202ENST00000338145 KIAA0586Q9BVV6 1533 aa16.53■□□□□ 0.24
UBE2D3-202ENST00000338145 ECM2O94769 699 aaPredicted RBP16.52■□□□□ 0.24
UBE2D3-202ENST00000338145 CLCN6P51797 869 aa16.52■□□□□ 0.24
UBE2D3-202ENST00000338145 SUPT5HO00267 1087 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-202ENST00000338145 TSPOAP1O95153 1857 aa16.48■□□□□ 0.23
UBE2D3-202ENST00000338145 SGIP1Q9BQI5 828 aa16.48■□□□□ 0.23
UBE2D3-202ENST00000338145 PTPRGP23470 1445 aa16.46■□□□□ 0.23
UBE2D3-202ENST00000338145 PYGBP11216 843 aa16.44■□□□□ 0.22
UBE2D3-202ENST00000338145 PLB1Q6P1J6 1458 aa16.43■□□□□ 0.22
UBE2D3-202ENST00000338145 EVX2Q03828 476 aa16.43■□□□□ 0.22
UBE2D3-202ENST00000338145 KIF12Q96FN5 646 aa16.43■□□□□ 0.22
UBE2D3-202ENST00000338145 IGF1RP08069 1367 aa16.42■□□□□ 0.22
UBE2D3-202ENST00000338145 ABCC2Q92887 1545 aa16.41■□□□□ 0.22
UBE2D3-202ENST00000338145 CARMIL2Q6F5E8 1435 aa16.41■□□□□ 0.22
UBE2D3-202ENST00000338145 GLI2P10070 1586 aa16.41■□□□□ 0.22
UBE2D3-202ENST00000338145 TNIKQ9UKE5 1360 aa16.4■□□□□ 0.22
UBE2D3-202ENST00000338145 PHF12Q96QT6 1004 aa16.4■□□□□ 0.22
UBE2D3-202ENST00000338145 ADGRL1O94910 1474 aa16.4■□□□□ 0.22
UBE2D3-202ENST00000338145 ASXL2Q76L83 1435 aa16.39■□□□□ 0.21
UBE2D3-202ENST00000338145 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
UBE2D3-202ENST00000338145 CUL7Q14999 1698 aa16.39■□□□□ 0.21
UBE2D3-202ENST00000338145 ZNF467Q7Z7K2 595 aaPredicted RBP16.38■□□□□ 0.21
UBE2D3-202ENST00000338145 UHRF1BP1LA0JNW5 1464 aa16.35■□□□□ 0.21
UBE2D3-202ENST00000338145 MAP3K13O43283 966 aa16.35■□□□□ 0.21
UBE2D3-202ENST00000338145 TAOK2Q9UL54 1235 aa16.35■□□□□ 0.21
UBE2D3-202ENST00000338145 PCDHB13Q9Y5F0 798 aa16.34■□□□□ 0.21
UBE2D3-202ENST00000338145 TTBK1Q5TCY1 1321 aaPredicted RBP16.34■□□□□ 0.21
UBE2D3-202ENST00000338145 PPRC1Q5VV67 1664 aaKnown RBP16.34■□□□□ 0.21
UBE2D3-202ENST00000338145 RGL2O15211 777 aa16.33■□□□□ 0.2
UBE2D3-202ENST00000338145 TEX14Q8IWB6 1497 aa16.33■□□□□ 0.2
UBE2D3-202ENST00000338145 RIOK3O14730 519 aaKnown RBP16.32■□□□□ 0.2
UBE2D3-202ENST00000338145 UACAQ9BZF9 1416 aa16.32■□□□□ 0.2
UBE2D3-202ENST00000338145 CARMIL1Q5VZK9 1371 aa16.31■□□□□ 0.2
UBE2D3-202ENST00000338145 RNF25Q96BH1 459 aaPredicted RBP16.31■□□□□ 0.2
UBE2D3-202ENST00000338145 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
UBE2D3-202ENST00000338145 EPRSP07814 1512 aaKnown RBP16.29■□□□□ 0.2
UBE2D3-202ENST00000338145 COL17A1Q9UMD9 1497 aaPredicted RBP16.29■□□□□ 0.2
UBE2D3-202ENST00000338145 SP7Q8TDD2 431 aaPredicted RBP16.27■□□□□ 0.2
UBE2D3-202ENST00000338145 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.19
UBE2D3-202ENST00000338145 IQGAP2Q13576 1575 aa16.26■□□□□ 0.19
UBE2D3-202ENST00000338145 KDM5BQ9UGL1 1544 aa16.26■□□□□ 0.19
UBE2D3-202ENST00000338145 VGFO15240 615 aaPredicted RBP16.26■□□□□ 0.19
UBE2D3-202ENST00000338145 IFNL1Q8IU54 200 aa16.26■□□□□ 0.19
UBE2D3-202ENST00000338145 MS4A3Q96HJ5 214 aa16.25■□□□□ 0.19
UBE2D3-202ENST00000338145 DISP1Q96F81 1524 aa16.21■□□□□ 0.19
UBE2D3-202ENST00000338145 GABBR2O75899 941 aa16.21■□□□□ 0.19
UBE2D3-202ENST00000338145 PDAP1Q13442 181 aaKnown RBP16.2■□□□□ 0.18
UBE2D3-202ENST00000338145 PCDHB8Q9UN66 801 aa16.2■□□□□ 0.18
UBE2D3-202ENST00000338145 FBXO41Q8TF61 875 aa16.18■□□□□ 0.18
UBE2D3-202ENST00000338145 ZCCHC11Q5TAX3 1644 aaKnown RBP16.17■□□□□ 0.18
UBE2D3-202ENST00000338145 GALR2O43603 387 aaPredicted RBP16.17■□□□□ 0.18
UBE2D3-202ENST00000338145 WDR7Q9Y4E6 1490 aa16.16■□□□□ 0.18
UBE2D3-202ENST00000338145 UGGT2Q9NYU1 1516 aa16.16■□□□□ 0.18
UBE2D3-202ENST00000338145 MAGI3Q5TCQ9 1506 aa16.14■□□□□ 0.18
UBE2D3-202ENST00000338145 TIE1P35590 1138 aa16.14■□□□□ 0.17
UBE2D3-202ENST00000338145 CD109Q6YHK3 1445 aa16.13■□□□□ 0.17
UBE2D3-202ENST00000338145 PSEN1P49768 467 aa16.12■□□□□ 0.17
UBE2D3-202ENST00000338145 RAPGEF2Q9Y4G8 1499 aa16.11■□□□□ 0.17
UBE2D3-202ENST00000338145 KIAA0556O60303 1618 aa16.11■□□□□ 0.17
UBE2D3-202ENST00000338145 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.09■□□□□ 0.17
UBE2D3-202ENST00000338145 HS6ST3Q8IZP7 471 aa16.09■□□□□ 0.17
UBE2D3-202ENST00000338145 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
UBE2D3-202ENST00000338145 CFAP43Q8NDM7 1665 aa16.08■□□□□ 0.17
UBE2D3-202ENST00000338145 KCNH8Q96L42 1107 aa16.07■□□□□ 0.16
UBE2D3-202ENST00000338145 GOLGA3Q08378 1498 aa16.04■□□□□ 0.16
UBE2D3-202ENST00000338145 PHLDB1Q86UU1 1377 aa16.03■□□□□ 0.16
UBE2D3-202ENST00000338145 STK25O00506 426 aa16.03■□□□□ 0.16
UBE2D3-202ENST00000338145 FAM9AQ8IZU1 332 aaPredicted RBP16.03■□□□□ 0.16
UBE2D3-202ENST00000338145 TRPC6Q9Y210 931 aa16.03■□□□□ 0.16
UBE2D3-202ENST00000338145 ARAP3Q8WWN8 1544 aa16.03■□□□□ 0.16
UBE2D3-202ENST00000338145 TMEM106CQ9BVX2 250 aa16.02■□□□□ 0.16
UBE2D3-202ENST00000338145 BMP2KQ9NSY1 1161 aaPredicted RBP16.02■□□□□ 0.16
UBE2D3-202ENST00000338145 CHGAP10645 457 aaKnown RBP16.01■□□□□ 0.15
UBE2D3-202ENST00000338145 KIF21BO75037 1637 aa16.01■□□□□ 0.15
UBE2D3-202ENST00000338145 TTLL13PA6NNM8 815 aa16■□□□□ 0.15
UBE2D3-202ENST00000338145 ASTLQ6HA08 431 aaPredicted RBP16■□□□□ 0.15
UBE2D3-202ENST00000338145 BCL11BQ9C0K0 894 aaPredicted RBP16■□□□□ 0.15
UBE2D3-202ENST00000338145 ABCA8O94911 1581 aa16■□□□□ 0.15
UBE2D3-202ENST00000338145 DCBLD2Q96PD2 775 aa15.99■□□□□ 0.15
UBE2D3-202ENST00000338145 PTPRMP28827 1452 aa15.98■□□□□ 0.15
UBE2D3-202ENST00000338145 STK24Q9Y6E0 443 aa15.97■□□□□ 0.15
UBE2D3-202ENST00000338145 ATMINO43313 823 aaPredicted RBP15.95■□□□□ 0.14
UBE2D3-202ENST00000338145 ADAMTSL3P82987 1691 aa15.95■□□□□ 0.14
UBE2D3-202ENST00000338145 CTTNBP2Q8WZ74 1663 aa15.93■□□□□ 0.14
UBE2D3-202ENST00000338145 BBXQ8WY36 941 aaPredicted RBP15.92■□□□□ 0.14
UBE2D3-202ENST00000338145 PCF11O94913 1555 aaKnown RBP15.9■□□□□ 0.14
UBE2D3-202ENST00000338145 ARID4BQ4LE39 1312 aaPredicted RBP15.9■□□□□ 0.14
UBE2D3-202ENST00000338145 NEO1Q92859 1461 aa15.9■□□□□ 0.14
UBE2D3-202ENST00000338145 RAPGEF3O95398 923 aa15.89■□□□□ 0.13
UBE2D3-202ENST00000338145 ATN1P54259 1190 aaPredicted RBP15.89■□□□□ 0.13
UBE2D3-202ENST00000338145 GOLGA2Q08379 1002 aa15.89■□□□□ 0.13
UBE2D3-202ENST00000338145 CABP2Q9NPB3 220 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms