RNA–Protein interactions for RNA: ENST00000336890.9

LCK-202, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCK, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-202ENST00000336890 HNRNPUQ00839 825 aaKnown RBP eCLIP22.78■■□□□ 1.24
LCK-202ENST00000336890 CHD1O14646 1710 aa22.78■■□□□ 1.24
LCK-202ENST00000336890 POLR1AO95602 1720 aaPredicted RBP22.78■■□□□ 1.24
LCK-202ENST00000336890 JPH4Q96JJ6 628 aa22.77■■□□□ 1.24
LCK-202ENST00000336890 WASHC2AQ641Q2 1341 aa22.77■■□□□ 1.23
LCK-202ENST00000336890 HSPA5P11021 654 aaKnown RBP22.76■■□□□ 1.23
LCK-202ENST00000336890 ROCK1Q13464 1354 aa22.76■■□□□ 1.23
LCK-202ENST00000336890 DENND4BO75064 1496 aaPredicted RBP22.76■■□□□ 1.23
LCK-202ENST00000336890 CARMIL2Q6F5E8 1435 aa22.76■■□□□ 1.23
LCK-202ENST00000336890 NCOA1Q15788 1441 aa22.72■■□□□ 1.23
LCK-202ENST00000336890 RRP7BPQ9NSQ0 103 aa22.72■■□□□ 1.23
LCK-202ENST00000336890 CDK11AQ9UQ88 783 aaPredicted RBP22.7■■□□□ 1.23
LCK-202ENST00000336890 MPHOSPH9Q99550 1183 aa22.7■■□□□ 1.22
LCK-202ENST00000336890 RPRD2Q5VT52 1461 aaKnown RBP22.7■■□□□ 1.22
LCK-202ENST00000336890 DNMT1P26358 1616 aaKnown RBP22.7■■□□□ 1.22
LCK-202ENST00000336890 KDM6BO15054 1643 aa22.69■■□□□ 1.22
LCK-202ENST00000336890 FANCIQ9NVI1 1328 aa22.67■■□□□ 1.22
LCK-202ENST00000336890 RAPGEF6Q8TEU7 1601 aa22.67■■□□□ 1.22
LCK-202ENST00000336890 CCDC7Q96M83 1385 aa22.67■■□□□ 1.22
LCK-202ENST00000336890 SHROOM2Q13796 1616 aa22.65■■□□□ 1.22
LCK-202ENST00000336890 DAPK1P53355 1430 aa22.64■■□□□ 1.22
LCK-202ENST00000336890 CHIC2Q9UKJ5 165 aa22.64■■□□□ 1.22
LCK-202ENST00000336890 CDK13Q14004 1512 aaKnown RBP22.64■■□□□ 1.21
LCK-202ENST00000336890 NUP153P49790 1475 aaKnown RBP22.64■■□□□ 1.21
LCK-202ENST00000336890 TEX14Q8IWB6 1497 aa22.63■■□□□ 1.21
LCK-202ENST00000336890 ANKRD30BQ9BXX2 1392 aa22.62■■□□□ 1.21
LCK-202ENST00000336890 PPP4R2Q9NY27 417 aa22.62■■□□□ 1.21
LCK-202ENST00000336890 L3MBTL2Q969R5 705 aa22.61■■□□□ 1.21
LCK-202ENST00000336890 ZBED9Q6R2W3 1325 aa22.61■■□□□ 1.21
LCK-202ENST00000336890 PRKRIP1Q9H875 184 aaPredicted RBP22.61■■□□□ 1.21
LCK-202ENST00000336890 PRG4Q92954 1404 aaPredicted RBP22.6■■□□□ 1.21
LCK-202ENST00000336890 CLASP1Q7Z460 1538 aa22.58■■□□□ 1.21
LCK-202ENST00000336890 PLB1Q6P1J6 1458 aa22.57■■□□□ 1.2
LCK-202ENST00000336890 ABCA8O94911 1581 aa22.57■■□□□ 1.2
LCK-202ENST00000336890 SPATA31E1Q6ZUB1 1445 aa22.56■■□□□ 1.2
LCK-202ENST00000336890 ADGBQ8N7X0 1667 aa22.56■■□□□ 1.2
LCK-202ENST00000336890 ITSN2Q9NZM3 1697 aa22.56■■□□□ 1.2
LCK-202ENST00000336890 ABCC5O15440 1437 aa22.55■■□□□ 1.2
LCK-202ENST00000336890 MRS2Q9HD23 443 aa22.53■■□□□ 1.2
LCK-202ENST00000336890 ARID4BQ4LE39 1312 aaPredicted RBP22.49■■□□□ 1.19
LCK-202ENST00000336890 PTPRGP23470 1445 aa22.49■■□□□ 1.19
LCK-202ENST00000336890 ERICH6Q7L0X2 663 aa22.48■■□□□ 1.19
LCK-202ENST00000336890 MYT1LQ9UL68 1186 aa22.48■■□□□ 1.19
LCK-202ENST00000336890 KIF7Q2M1P5 1343 aa22.47■■□□□ 1.19
LCK-202ENST00000336890 SLC4A1APQ9BWU0 796 aaKnown RBP22.47■■□□□ 1.19
LCK-202ENST00000336890 KIF14Q15058 1648 aa22.47■■□□□ 1.19
LCK-202ENST00000336890 MBD5Q9P267 1494 aa22.46■■□□□ 1.19
LCK-202ENST00000336890 CROCC2H7BZ55 1655 aa22.45■■□□□ 1.18
LCK-202ENST00000336890 ADGRL2O95490 1459 aa22.45■■□□□ 1.18
LCK-202ENST00000336890 ADCY10Q96PN6 1610 aa22.45■■□□□ 1.18
LCK-202ENST00000336890 C11orf95C9JLR9 678 aaPredicted RBP22.44■■□□□ 1.18
LCK-202ENST00000336890 TROQ12816 1431 aaPredicted RBP22.44■■□□□ 1.18
LCK-202ENST00000336890 NBPF8Q3BBV2 869 aa22.44■■□□□ 1.18
LCK-202ENST00000336890 FAM9BQ8IZU0 186 aa22.44■■□□□ 1.18
LCK-202ENST00000336890 IRX6P78412 446 aaPredicted RBP22.43■■□□□ 1.18
LCK-202ENST00000336890 PZPP20742 1482 aa22.43■■□□□ 1.18
LCK-202ENST00000336890 SMG6Q86US8 1419 aaKnown RBP22.42■■□□□ 1.18
LCK-202ENST00000336890 CAMSAP2Q08AD1 1489 aa22.42■■□□□ 1.18
LCK-202ENST00000336890 KIAA1107Q9UPP5 1409 aa22.41■■□□□ 1.18
LCK-202ENST00000336890 ERCC6L2Q5T890 1561 aa22.41■■□□□ 1.18
LCK-202ENST00000336890 ATP10BO94823 1461 aa22.41■■□□□ 1.18
LCK-202ENST00000336890 ARID3CA6NKF2 412 aa22.41■■□□□ 1.18
LCK-202ENST00000336890 ROCK2O75116 1388 aaKnown RBP22.4■■□□□ 1.18
LCK-202ENST00000336890 FOXD1Q16676 465 aa22.4■■□□□ 1.18
LCK-202ENST00000336890 CCDC184Q52MB2 194 aa22.4■■□□□ 1.18
LCK-202ENST00000336890 MSH5O43196 834 aa22.4■■□□□ 1.18
LCK-202ENST00000336890 KDM5CP41229 1560 aa22.36■■□□□ 1.17
LCK-202ENST00000336890 ARHGEF12Q9NZN5 1544 aa22.35■■□□□ 1.17
LCK-202ENST00000336890 USP47Q96K76 1375 aa22.34■■□□□ 1.17
LCK-202ENST00000336890 DHX29Q7Z478 1369 aaKnown RBP22.34■■□□□ 1.17
LCK-202ENST00000336890 ANKRD30AQ9BXX3 1397 aa22.34■■□□□ 1.17
LCK-202ENST00000336890 BCL11AQ9H165 835 aa22.34■■□□□ 1.17
LCK-202ENST00000336890 UHRF1BP1Q6BDS2 1440 aa22.33■■□□□ 1.17
LCK-202ENST00000336890 ABCC2Q92887 1545 aa22.33■■□□□ 1.16
LCK-202ENST00000336890 KTN1Q86UP2 1357 aaKnown RBP22.32■■□□□ 1.16
LCK-202ENST00000336890 RALGAPBQ86X10 1494 aa22.32■■□□□ 1.16
LCK-202ENST00000336890 SHANK2Q9UPX8 1470 aa22.32■■□□□ 1.16
LCK-202ENST00000336890 CFDP1Q9UEE9 299 aaPredicted RBP22.31■■□□□ 1.16
LCK-202ENST00000336890 GPATCH8Q9UKJ3 1502 aaKnown RBP22.31■■□□□ 1.16
LCK-202ENST00000336890 BCORL1Q5H9F3 1711 aa22.3■■□□□ 1.16
LCK-202ENST00000336890 UHRF1BP1LA0JNW5 1464 aa22.3■■□□□ 1.16
LCK-202ENST00000336890 PLEKHD1A6NEE1 506 aa22.3■■□□□ 1.16
LCK-202ENST00000336890 NUDCQ9Y266 331 aa22.3■■□□□ 1.16
LCK-202ENST00000336890 ZNF644Q9H582 1327 aaPredicted RBP22.29■■□□□ 1.16
LCK-202ENST00000336890 RNF123Q5XPI4 1314 aa22.29■■□□□ 1.16
LCK-202ENST00000336890 KDM5DQ9BY66 1539 aa22.28■■□□□ 1.16
LCK-202ENST00000336890 B4GALNT3Q6L9W6 998 aa22.26■■□□□ 1.15
LCK-202ENST00000336890 ABCC10Q5T3U5 1492 aa22.25■■□□□ 1.15
LCK-202ENST00000336890 ANKRD50Q9ULJ7 1429 aa22.25■■□□□ 1.15
LCK-202ENST00000336890 OSCARQ8IYS5 282 aa22.24■■□□□ 1.15
LCK-202ENST00000336890 KIF15Q9NS87 1388 aa22.23■■□□□ 1.15
LCK-202ENST00000336890 PKD2Q13563 968 aa22.21■■□□□ 1.15
LCK-202ENST00000336890 CDC42BPAQ5VT25 1732 aa22.19■■□□□ 1.14
LCK-202ENST00000336890 BRD4O60885 1362 aaPredicted RBP22.18■■□□□ 1.14
LCK-202ENST00000336890 E9PCH4 1651 aa22.17■■□□□ 1.14
LCK-202ENST00000336890 TMC1Q8TDI8 760 aa22.16■■□□□ 1.14
LCK-202ENST00000336890 CCDC136Q96JN2 1154 aa22.16■■□□□ 1.14
LCK-202ENST00000336890 RALBP1Q15311 655 aa22.15■■□□□ 1.14
LCK-202ENST00000336890 C9orf84Q5VXU9 1444 aa22.15■■□□□ 1.14
LCK-202ENST00000336890 PNISRQ8TF01 805 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms