RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CDK13Q14004 1512 aaKnown RBP22.56■■□□□ 1.2
CDC42EP4-201ENST00000335793 NBPF8Q3BBV2 869 aa22.55■■□□□ 1.2
CDC42EP4-201ENST00000335793 CFDP1Q9UEE9 299 aaPredicted RBP22.54■■□□□ 1.2
CDC42EP4-201ENST00000335793 EPRSP07814 1512 aaKnown RBP22.51■■□□□ 1.19
CDC42EP4-201ENST00000335793 MAGI3Q5TCQ9 1506 aa22.51■■□□□ 1.19
CDC42EP4-201ENST00000335793 UGGT2Q9NYU1 1516 aa22.51■■□□□ 1.19
CDC42EP4-201ENST00000335793 B4GALNT3Q6L9W6 998 aa22.51■■□□□ 1.19
CDC42EP4-201ENST00000335793 IL27Q8NEV9 243 aa22.51■■□□□ 1.19
CDC42EP4-201ENST00000335793 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
CDC42EP4-201ENST00000335793 SAMD9Q5K651 1589 aa22.5■■□□□ 1.19
CDC42EP4-201ENST00000335793 EIF5BO60841 1220 aaKnown RBP22.49■■□□□ 1.19
CDC42EP4-201ENST00000335793 CCDC7Q96M83 1385 aa22.48■■□□□ 1.19
CDC42EP4-201ENST00000335793 CNTLNQ9NXG0 1405 aa22.46■■□□□ 1.19
CDC42EP4-201ENST00000335793 PPP4R2Q9NY27 417 aa22.46■■□□□ 1.19
CDC42EP4-201ENST00000335793 KDM2AQ9Y2K7 1162 aa22.46■■□□□ 1.19
CDC42EP4-201ENST00000335793 ABCA5Q8WWZ7 1642 aa22.45■■□□□ 1.18
CDC42EP4-201ENST00000335793 CHMP7Q8WUX9 453 aaPredicted RBP22.45■■□□□ 1.18
CDC42EP4-201ENST00000335793 KIF7Q2M1P5 1343 aa22.44■■□□□ 1.18
CDC42EP4-201ENST00000335793 MIA2Q96PC5 1412 aa22.43■■□□□ 1.18
CDC42EP4-201ENST00000335793 LRRIQ1Q96JM4 1722 aa22.42■■□□□ 1.18
CDC42EP4-201ENST00000335793 PKD2Q13563 968 aa22.42■■□□□ 1.18
CDC42EP4-201ENST00000335793 HECW1Q76N89 1606 aa22.42■■□□□ 1.18
CDC42EP4-201ENST00000335793 THOC2Q8NI27 1593 aaKnown RBP22.4■■□□□ 1.18
CDC42EP4-201ENST00000335793 KDM6BO15054 1643 aa22.4■■□□□ 1.18
CDC42EP4-201ENST00000335793 ZNF608Q9ULD9 1512 aaPredicted RBP22.4■■□□□ 1.18
CDC42EP4-201ENST00000335793 IQGAP2Q13576 1575 aa22.4■■□□□ 1.18
CDC42EP4-201ENST00000335793 ANKRD30BQ9BXX2 1392 aa22.39■■□□□ 1.17
CDC42EP4-201ENST00000335793 UBE2Q2Q8WVN8 375 aa22.39■■□□□ 1.17
CDC42EP4-201ENST00000335793 DAPK1P53355 1430 aa22.37■■□□□ 1.17
CDC42EP4-201ENST00000335793 TMC1Q8TDI8 760 aa22.37■■□□□ 1.17
CDC42EP4-201ENST00000335793 TCOF1Q13428 1488 aaKnown RBP22.37■■□□□ 1.17
CDC42EP4-201ENST00000335793 DENND4BO75064 1496 aaPredicted RBP22.36■■□□□ 1.17
CDC42EP4-201ENST00000335793 KDM5BQ9UGL1 1544 aa22.35■■□□□ 1.17
CDC42EP4-201ENST00000335793 ABCC5O15440 1437 aa22.34■■□□□ 1.17
CDC42EP4-201ENST00000335793 ZBED9Q6R2W3 1325 aa22.34■■□□□ 1.17
CDC42EP4-201ENST00000335793 NCOA1Q15788 1441 aa22.33■■□□□ 1.16
CDC42EP4-201ENST00000335793 CARD11Q9BXL7 1154 aa22.33■■□□□ 1.16
CDC42EP4-201ENST00000335793 ARHGEF11O15085 1522 aa22.31■■□□□ 1.16
CDC42EP4-201ENST00000335793 PLEKHD1A6NEE1 506 aa22.31■■□□□ 1.16
CDC42EP4-201ENST00000335793 TSPY4P0CV99 314 aa22.31■■□□□ 1.16
CDC42EP4-201ENST00000335793 TSPY10P0CW01 314 aa22.31■■□□□ 1.16
CDC42EP4-201ENST00000335793 PRG4Q92954 1404 aaPredicted RBP22.31■■□□□ 1.16
CDC42EP4-201ENST00000335793 AKNAQ7Z591 1439 aa22.3■■□□□ 1.16
CDC42EP4-201ENST00000335793 RPRD2Q5VT52 1461 aaKnown RBP22.29■■□□□ 1.16
CDC42EP4-201ENST00000335793 ERICH6BQ5W0A0 696 aa22.29■■□□□ 1.16
CDC42EP4-201ENST00000335793 USP47Q96K76 1375 aa22.27■■□□□ 1.16
CDC42EP4-201ENST00000335793 FANCIQ9NVI1 1328 aa22.27■■□□□ 1.16
CDC42EP4-201ENST00000335793 ROCK1Q13464 1354 aa22.27■■□□□ 1.16
CDC42EP4-201ENST00000335793 DCAF11Q8TEB1 546 aa22.26■■□□□ 1.15
CDC42EP4-201ENST00000335793 MYT1LQ9UL68 1186 aa22.25■■□□□ 1.15
CDC42EP4-201ENST00000335793 NUP155O75694 1391 aa22.25■■□□□ 1.15
CDC42EP4-201ENST00000335793 TARBP1Q13395 1621 aaKnown RBP22.25■■□□□ 1.15
CDC42EP4-201ENST00000335793 WDR62O43379 1518 aa22.24■■□□□ 1.15
CDC42EP4-201ENST00000335793 RGL3Q3MIN7 710 aa22.23■■□□□ 1.15
CDC42EP4-201ENST00000335793 GCC2Q8IWJ2 1684 aa22.22■■□□□ 1.15
CDC42EP4-201ENST00000335793 JPH4Q96JJ6 628 aa22.22■■□□□ 1.15
CDC42EP4-201ENST00000335793 ANKRD30AQ9BXX3 1397 aa22.22■■□□□ 1.15
CDC42EP4-201ENST00000335793 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.21■■□□□ 1.15
CDC42EP4-201ENST00000335793 PAK3O75914 559 aaPredicted RBP22.2■■□□□ 1.14
CDC42EP4-201ENST00000335793 RTL5Q5HYW3 569 aaPredicted RBP22.2■■□□□ 1.14
CDC42EP4-201ENST00000335793 KIAA0586Q9BVV6 1533 aa22.2■■□□□ 1.14
CDC42EP4-201ENST00000335793 ST20-MTHFSA0A0A6YYL1 179 aa22.19■■□□□ 1.14
CDC42EP4-201ENST00000335793 HNRNPMP52272 730 aaKnown RBP eCLIP22.19■■□□□ 1.14
CDC42EP4-201ENST00000335793 NUP153P49790 1475 aaKnown RBP22.19■■□□□ 1.14
CDC42EP4-201ENST00000335793 NUDCQ9Y266 331 aa22.18■■□□□ 1.14
CDC42EP4-201ENST00000335793 ADAMTS12P58397 1594 aa22.17■■□□□ 1.14
CDC42EP4-201ENST00000335793 PLB1Q6P1J6 1458 aa22.16■■□□□ 1.14
CDC42EP4-201ENST00000335793 PBRM1Q86U86 1689 aa22.16■■□□□ 1.14
CDC42EP4-201ENST00000335793 TROQ12816 1431 aaPredicted RBP22.16■■□□□ 1.14
CDC42EP4-201ENST00000335793 TEX14Q8IWB6 1497 aa22.15■■□□□ 1.14
CDC42EP4-201ENST00000335793 ANKRD50Q9ULJ7 1429 aa22.14■■□□□ 1.13
CDC42EP4-201ENST00000335793 KIAA1107Q9UPP5 1409 aa22.14■■□□□ 1.13
CDC42EP4-201ENST00000335793 CAMSAP2Q08AD1 1489 aa22.13■■□□□ 1.13
CDC42EP4-201ENST00000335793 DISP1Q96F81 1524 aa22.12■■□□□ 1.13
CDC42EP4-201ENST00000335793 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
CDC42EP4-201ENST00000335793 SPATA31E1Q6ZUB1 1445 aa22.11■■□□□ 1.13
CDC42EP4-201ENST00000335793 NOP58Q9Y2X3 529 aaKnown RBP22.11■■□□□ 1.13
CDC42EP4-201ENST00000335793 PKNOX2Q96KN3 472 aa22.11■■□□□ 1.13
CDC42EP4-201ENST00000335793 CARMIL2Q6F5E8 1435 aa22.1■■□□□ 1.13
CDC42EP4-201ENST00000335793 PZPP20742 1482 aa22.08■■□□□ 1.13
CDC42EP4-201ENST00000335793 DNMT1P26358 1616 aaKnown RBP22.08■■□□□ 1.12
CDC42EP4-201ENST00000335793 PNISRQ8TF01 805 aaKnown RBP22.08■■□□□ 1.12
CDC42EP4-201ENST00000335793 GRIN2AQ12879 1464 aa22.08■■□□□ 1.12
CDC42EP4-201ENST00000335793 GPATCH8Q9UKJ3 1502 aaKnown RBP22.07■■□□□ 1.12
CDC42EP4-201ENST00000335793 KIAA0556O60303 1618 aa22.07■■□□□ 1.12
CDC42EP4-201ENST00000335793 PLEKHG5O94827 1062 aa22.07■■□□□ 1.12
CDC42EP4-201ENST00000335793 ANP32AP39687 249 aaKnown RBP22.05■■□□□ 1.12
CDC42EP4-201ENST00000335793 NPM2Q86SE8 214 aaKnown RBP22.05■■□□□ 1.12
CDC42EP4-201ENST00000335793 RAPGEF6Q8TEU7 1601 aa22.05■■□□□ 1.12
CDC42EP4-201ENST00000335793 ROCK2O75116 1388 aaKnown RBP22.05■■□□□ 1.12
CDC42EP4-201ENST00000335793 DHX29Q7Z478 1369 aaKnown RBP22.04■■□□□ 1.12
CDC42EP4-201ENST00000335793 CC2D1BQ5T0F9 858 aaKnown RBP22.04■■□□□ 1.12
CDC42EP4-201ENST00000335793 KIF15Q9NS87 1388 aa22.01■■□□□ 1.11
CDC42EP4-201ENST00000335793 SMG6Q86US8 1419 aaKnown RBP22■■□□□ 1.11
CDC42EP4-201ENST00000335793 C9orf84Q5VXU9 1444 aa21.99■■□□□ 1.11
CDC42EP4-201ENST00000335793 ARID4BQ4LE39 1312 aaPredicted RBP21.98■■□□□ 1.11
CDC42EP4-201ENST00000335793 MYBBP1AQ9BQG0 1328 aaKnown RBP21.98■■□□□ 1.11
CDC42EP4-201ENST00000335793 RALBP1Q15311 655 aa21.98■■□□□ 1.11
CDC42EP4-201ENST00000335793 EIF4G3O43432 1585 aaKnown RBP21.97■■□□□ 1.11
CDC42EP4-201ENST00000335793 NBPF1Q3BBV0 1214 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms