RNA–Protein interactions for RNA: ENST00000333651.10

HMG20B-202, Transcript of high mobility group 20B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20B, Length 1,596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-202ENST00000333651 CFAP74Q9C0B2 1584 aa36.99■■■■□ 3.51
HMG20B-202ENST00000333651 GPATCH8Q9UKJ3 1502 aaKnown RBP36.98■■■■□ 3.51
HMG20B-202ENST00000333651 SUPT6HQ7KZ85 1726 aaKnown RBP36.98■■■■□ 3.51
HMG20B-202ENST00000333651 NCOA2Q15596 1464 aa36.96■■■■□ 3.51
HMG20B-202ENST00000333651 CFDP1Q9UEE9 299 aaPredicted RBP36.95■■■■□ 3.51
HMG20B-202ENST00000333651 PREX2Q70Z35 1606 aa36.94■■■■□ 3.5
HMG20B-202ENST00000333651 CDC42BPAQ5VT25 1732 aa36.93■■■■□ 3.5
HMG20B-202ENST00000333651 CDC42BPBQ9Y5S2 1711 aa36.93■■■■□ 3.5
HMG20B-202ENST00000333651 RAPGEF3O95398 923 aa36.9■■■■□ 3.5
HMG20B-202ENST00000333651 ZNF777Q9ULD5 760 aaPredicted RBP36.9■■■■□ 3.5
HMG20B-202ENST00000333651 ADGRL1O94910 1474 aa36.89■■■■□ 3.5
HMG20B-202ENST00000333651 SCAPERQ9BY12 1400 aa36.87■■■■□ 3.49
HMG20B-202ENST00000333651 DENND4BO75064 1496 aaPredicted RBP36.86■■■■□ 3.49
HMG20B-202ENST00000333651 ITSN2Q9NZM3 1697 aa36.8■■■■□ 3.48
HMG20B-202ENST00000333651 POGZQ7Z3K3 1410 aa36.72■■■■□ 3.47
HMG20B-202ENST00000333651 ZNF644Q9H582 1327 aaPredicted RBP36.72■■■■□ 3.47
HMG20B-202ENST00000333651 SAMD9LQ8IVG5 1584 aa36.72■■■■□ 3.47
HMG20B-202ENST00000333651 MYOM3Q5VTT5 1437 aa36.72■■■■□ 3.47
HMG20B-202ENST00000333651 AFAP1Q8N556 730 aa36.7■■■■□ 3.47
HMG20B-202ENST00000333651 ABCC1P33527 1531 aa36.7■■■■□ 3.47
HMG20B-202ENST00000333651 PLEKHH2Q8IVE3 1493 aa36.7■■■■□ 3.47
HMG20B-202ENST00000333651 FRMPD1Q5SYB0 1578 aa36.7■■■■□ 3.47
HMG20B-202ENST00000333651 HNRNPMP52272 730 aaKnown RBP eCLIP36.7■■■■□ 3.46
HMG20B-202ENST00000333651 PPARGC1BQ86YN6 1023 aaKnown RBP36.7■■■■□ 3.46
HMG20B-202ENST00000333651 RICTORQ6R327 1708 aa36.69■■■■□ 3.46
HMG20B-202ENST00000333651 ARHGEF12Q9NZN5 1544 aa36.68■■■■□ 3.46
HMG20B-202ENST00000333651 KIAA1107Q9UPP5 1409 aa36.68■■■■□ 3.46
HMG20B-202ENST00000333651 ZNF518AQ6AHZ1 1483 aa36.67■■■■□ 3.46
HMG20B-202ENST00000333651 MIA2Q96PC5 1412 aa36.65■■■■□ 3.46
HMG20B-202ENST00000333651 TRAPPC8Q9Y2L5 1435 aa36.64■■■■□ 3.46
HMG20B-202ENST00000333651 SYCP2Q9BX26 1530 aa36.62■■■■□ 3.45
HMG20B-202ENST00000333651 MYT1LQ9UL68 1186 aa36.6■■■■□ 3.45
HMG20B-202ENST00000333651 CAMSAP2Q08AD1 1489 aa36.59■■■■□ 3.45
HMG20B-202ENST00000333651 ZMYM4Q5VZL5 1548 aa36.58■■■■□ 3.45
HMG20B-202ENST00000333651 MAGI2Q86UL8 1455 aa36.57■■■■□ 3.44
HMG20B-202ENST00000333651 RSPH4AQ5TD94 716 aa36.55■■■■□ 3.44
HMG20B-202ENST00000333651 KDM5CP41229 1560 aa36.54■■■■□ 3.44
HMG20B-202ENST00000333651 MBD5Q9P267 1494 aa36.53■■■■□ 3.44
HMG20B-202ENST00000333651 FGD6Q6ZV73 1430 aa36.53■■■■□ 3.44
HMG20B-202ENST00000333651 SPAG9O60271 1321 aaKnown RBP36.5■■■■□ 3.43
HMG20B-202ENST00000333651 YEATS2Q9ULM3 1422 aa36.49■■■■□ 3.43
HMG20B-202ENST00000333651 ZFYVE16Q7Z3T8 1539 aa36.49■■■■□ 3.43
HMG20B-202ENST00000333651 MLH3Q9UHC1 1453 aa36.49■■■■□ 3.43
HMG20B-202ENST00000333651 HECW2Q9P2P5 1572 aa36.45■■■■□ 3.43
HMG20B-202ENST00000333651 PTPN23Q9H3S7 1636 aa36.45■■■■□ 3.42
HMG20B-202ENST00000333651 ARHGEF40Q8TER5 1519 aa36.43■■■■□ 3.42
HMG20B-202ENST00000333651 CCDC141Q6ZP82 1450 aa36.42■■■■□ 3.42
HMG20B-202ENST00000333651 TSPY4P0CV99 314 aa36.42■■■■□ 3.42
HMG20B-202ENST00000333651 TSPY10P0CW01 314 aa36.42■■■■□ 3.42
HMG20B-202ENST00000333651 ARHGEF5Q12774 1597 aa36.4■■■■□ 3.42
HMG20B-202ENST00000333651 TCOF1Q13428 1488 aaKnown RBP36.39■■■■□ 3.42
HMG20B-202ENST00000333651 FAM50AQ14320 339 aaKnown RBP36.39■■■■□ 3.42
HMG20B-202ENST00000333651 ATP10AO60312 1499 aa36.38■■■■□ 3.41
HMG20B-202ENST00000333651 ARID4BQ4LE39 1312 aaPredicted RBP36.35■■■■□ 3.41
HMG20B-202ENST00000333651 KIDINS220Q9ULH0 1771 aa36.34■■■■□ 3.41
HMG20B-202ENST00000333651 RTEL1-TNFRSF6BF6WH68 1400 aa36.33■■■■□ 3.41
HMG20B-202ENST00000333651 ATP7AQ04656 1500 aa36.33■■■■□ 3.41
HMG20B-202ENST00000333651 C9orf84Q5VXU9 1444 aa36.31■■■■□ 3.4
HMG20B-202ENST00000333651 INO80Q9ULG1 1556 aaPredicted RBP36.29■■■■□ 3.4
HMG20B-202ENST00000333651 DIP2CQ9Y2E4 1556 aa36.29■■■■□ 3.4
HMG20B-202ENST00000333651 ABCA6Q8N139 1617 aa36.28■■■■□ 3.4
HMG20B-202ENST00000333651 ABCC5O15440 1437 aa36.26■■■■□ 3.4
HMG20B-202ENST00000333651 DAPK1P53355 1430 aa36.24■■■■□ 3.39
HMG20B-202ENST00000333651 DNMT1P26358 1616 aaKnown RBP36.2■■■■□ 3.39
HMG20B-202ENST00000333651 KDM4FA0A1W2PPD8 638 aa36.19■■■■□ 3.38
HMG20B-202ENST00000333651 REREQ9P2R6 1566 aa36.18■■■■□ 3.38
HMG20B-202ENST00000333651 MAST1Q9Y2H9 1570 aa36.17■■■■□ 3.38
HMG20B-202ENST00000333651 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.17■■■■□ 3.381e-6■■□□□ 12.5
HMG20B-202ENST00000333651 RRBP1Q9P2E9 1410 aaKnown RBP36.16■■■■□ 3.38
HMG20B-202ENST00000333651 A2MP01023 1474 aa36.16■■■■□ 3.38
HMG20B-202ENST00000333651 SHANK2Q9UPX8 1470 aa36.16■■■■□ 3.38
HMG20B-202ENST00000333651 CHIC2Q9UKJ5 165 aa36.15■■■■□ 3.38
HMG20B-202ENST00000333651 MLECQ14165 292 aa36.15■■■■□ 3.38
HMG20B-202ENST00000333651 SIGLEC1Q9BZZ2 1709 aa36.14■■■■□ 3.38
HMG20B-202ENST00000333651 ADGBQ8N7X0 1667 aa36.12■■■■□ 3.37
HMG20B-202ENST00000333651 DHX29Q7Z478 1369 aaKnown RBP36.11■■■■□ 3.37
HMG20B-202ENST00000333651 CROCC2H7BZ55 1655 aa36.11■■■■□ 3.37
HMG20B-202ENST00000333651 AGLP35573 1532 aa36.1■■■■□ 3.37
HMG20B-202ENST00000333651 ITGAEP38570 1179 aa36.09■■■■□ 3.37
HMG20B-202ENST00000333651 RRP7BPQ9NSQ0 103 aa36.07■■■■□ 3.37
HMG20B-202ENST00000333651 BCORL1Q5H9F3 1711 aa36.07■■■■□ 3.36
HMG20B-202ENST00000333651 ANKRD30AQ9BXX3 1397 aa36.06■■■■□ 3.36
HMG20B-202ENST00000333651 PLXNC1O60486 1568 aa36.04■■■■□ 3.36
HMG20B-202ENST00000333651 KIF15Q9NS87 1388 aa36.02■■■■□ 3.36
HMG20B-202ENST00000333651 PTPRKQ15262 1439 aa36.01■■■■□ 3.35
HMG20B-202ENST00000333651 NCOA1Q15788 1441 aa36.01■■■■□ 3.35
HMG20B-202ENST00000333651 ADAMTSL3P82987 1691 aa35.99■■■■□ 3.35
HMG20B-202ENST00000333651 KIF3BO15066 747 aa35.99■■■■□ 3.35
HMG20B-202ENST00000333651 GGT6Q6P531 493 aa35.98■■■■□ 3.35
HMG20B-202ENST00000333651 ADGRL2O95490 1459 aa35.97■■■■□ 3.35
HMG20B-202ENST00000333651 AEBP2Q6ZN18 517 aaPredicted RBP35.97■■■■□ 3.35
HMG20B-202ENST00000333651 DUOX2Q9NRD8 1548 aa35.96■■■■□ 3.35
HMG20B-202ENST00000333651 ESF1Q9H501 851 aaKnown RBP35.93■■■■□ 3.34
HMG20B-202ENST00000333651 MADDQ8WXG6 1647 aa35.91■■■■□ 3.34
HMG20B-202ENST00000333651 ROCK1Q13464 1354 aa35.9■■■■□ 3.34
HMG20B-202ENST00000333651 PPP6R1Q9UPN7 881 aa35.87■■■■□ 3.33
HMG20B-202ENST00000333651 ERBINQ96RT1 1412 aa35.87■■■■□ 3.33
HMG20B-202ENST00000333651 FER1L4A9Z1Z3 1794 aa35.83■■■■□ 3.33
HMG20B-202ENST00000333651 PTPRMP28827 1452 aa35.83■■■■□ 3.33
HMG20B-202ENST00000333651 RIMS1Q86UR5 1692 aaKnown RBP35.81■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms