RNA–Protein interactions for RNA: ENST00000332981.9

PRKCH-201, Transcript of protein kinase C eta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCH, Length 3,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-201ENST00000332981 RGS3P49796 1198 aa17.99■□□□□ 0.47
PRKCH-201ENST00000332981 NCAPD3P42695 1498 aa17.99■□□□□ 0.47
PRKCH-201ENST00000332981 NCOA2Q15596 1464 aa17.99■□□□□ 0.47
PRKCH-201ENST00000332981 NAIPQ13075 1403 aa17.97■□□□□ 0.47
PRKCH-201ENST00000332981 FANCIQ9NVI1 1328 aa17.97■□□□□ 0.47
PRKCH-201ENST00000332981 CDCA7LQ96GN5 454 aa17.97■□□□□ 0.47
PRKCH-201ENST00000332981 NUDCQ9Y266 331 aa17.97■□□□□ 0.47
PRKCH-201ENST00000332981 CHMP7Q8WUX9 453 aaPredicted RBP17.96■□□□□ 0.47
PRKCH-201ENST00000332981 IL27Q8NEV9 243 aa17.96■□□□□ 0.47
PRKCH-201ENST00000332981 ZBED9Q6R2W3 1325 aa17.95■□□□□ 0.46
PRKCH-201ENST00000332981 TSPY4P0CV99 314 aa17.95■□□□□ 0.46
PRKCH-201ENST00000332981 TSPY10P0CW01 314 aa17.95■□□□□ 0.46
PRKCH-201ENST00000332981 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
PRKCH-201ENST00000332981 MYOM3Q5VTT5 1437 aa17.93■□□□□ 0.46
PRKCH-201ENST00000332981 NEUROD2Q15784 382 aa17.93■□□□□ 0.46
PRKCH-201ENST00000332981 PEG3Q9GZU2 1588 aa17.92■□□□□ 0.46
PRKCH-201ENST00000332981 HNRNPMP52272 730 aaKnown RBP eCLIP17.91■□□□□ 0.46
PRKCH-201ENST00000332981 CASKIN1Q8WXD9 1431 aa17.91■□□□□ 0.46
PRKCH-201ENST00000332981 TNNT2P45379 298 aaPredicted RBP17.91■□□□□ 0.46
PRKCH-201ENST00000332981 CNTLNQ9NXG0 1405 aa17.91■□□□□ 0.46
PRKCH-201ENST00000332981 RCAN3Q9UKA8 241 aa17.89■□□□□ 0.45
PRKCH-201ENST00000332981 IPO9Q96P70 1041 aaKnown RBP17.89■□□□□ 0.45
PRKCH-201ENST00000332981 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
PRKCH-201ENST00000332981 HFM1A2PYH4 1435 aa17.88■□□□□ 0.45
PRKCH-201ENST00000332981 USP47Q96K76 1375 aa17.88■□□□□ 0.45
PRKCH-201ENST00000332981 NUP155O75694 1391 aa17.87■□□□□ 0.45
PRKCH-201ENST00000332981 CANXP27824 592 aaKnown RBP17.87■□□□□ 0.45
PRKCH-201ENST00000332981 POLA1P09884 1462 aaPredicted RBP17.86■□□□□ 0.45
PRKCH-201ENST00000332981 CHGAP10645 457 aaKnown RBP17.85■□□□□ 0.45
PRKCH-201ENST00000332981 CCDC146Q8IYE0 955 aa17.84■□□□□ 0.45
PRKCH-201ENST00000332981 PLEKHD1A6NEE1 506 aa17.83■□□□□ 0.45
PRKCH-201ENST00000332981 CDK13Q14004 1512 aaKnown RBP17.83■□□□□ 0.45
PRKCH-201ENST00000332981 NBPF1Q3BBV0 1214 aa17.81■□□□□ 0.44
PRKCH-201ENST00000332981 FYCO1Q9BQS8 1478 aa17.81■□□□□ 0.44
PRKCH-201ENST00000332981 WDR43Q15061 677 aaKnown RBP eCLIP17.81■□□□□ 0.44
PRKCH-201ENST00000332981 PDE4AP27815 886 aa17.8■□□□□ 0.44
PRKCH-201ENST00000332981 SPRYD3Q8NCJ5 442 aa17.79■□□□□ 0.44
PRKCH-201ENST00000332981 CRBNQ96SW2 442 aa17.79■□□□□ 0.44
PRKCH-201ENST00000332981 GAPVD1Q14C86 1478 aa17.78■□□□□ 0.44
PRKCH-201ENST00000332981 RRP1P56182 461 aaKnown RBP17.78■□□□□ 0.44
PRKCH-201ENST00000332981 ROCK2O75116 1388 aaKnown RBP17.77■□□□□ 0.44
PRKCH-201ENST00000332981 PNISRQ8TF01 805 aaKnown RBP17.77■□□□□ 0.43
PRKCH-201ENST00000332981 FRAT1Q92837 279 aaPredicted RBP17.75■□□□□ 0.43
PRKCH-201ENST00000332981 PANK3Q9H999 370 aa17.75■□□□□ 0.43
PRKCH-201ENST00000332981 TOPBP1Q92547 1522 aa17.75■□□□□ 0.43
PRKCH-201ENST00000332981 ARID4BQ4LE39 1312 aaPredicted RBP17.74■□□□□ 0.43
PRKCH-201ENST00000332981 PTPN23Q9H3S7 1636 aa17.73■□□□□ 0.43
PRKCH-201ENST00000332981 ERICH6BQ5W0A0 696 aa17.73■□□□□ 0.43
PRKCH-201ENST00000332981 C20orf194Q5TEA3 1177 aa17.73■□□□□ 0.43
PRKCH-201ENST00000332981 PRG4Q92954 1404 aaPredicted RBP17.7■□□□□ 0.42
PRKCH-201ENST00000332981 KNSTRNQ9Y448 316 aa17.69■□□□□ 0.42
PRKCH-201ENST00000332981 SLKQ9H2G2 1235 aaPredicted RBP17.68■□□□□ 0.42
PRKCH-201ENST00000332981 HMGXB3Q12766 1538 aa17.68■□□□□ 0.42
PRKCH-201ENST00000332981 BCL2L13Q9BXK5 485 aa17.68■□□□□ 0.42
PRKCH-201ENST00000332981 ANKRD30BQ9BXX2 1392 aa17.67■□□□□ 0.42
PRKCH-201ENST00000332981 RRP7AQ9Y3A4 280 aaKnown RBP17.67■□□□□ 0.42
PRKCH-201ENST00000332981 MYBBP1AQ9BQG0 1328 aaKnown RBP17.66■□□□□ 0.42
PRKCH-201ENST00000332981 NCOA1Q15788 1441 aa17.66■□□□□ 0.42
PRKCH-201ENST00000332981 NLRP13Q86W25 1043 aa17.65■□□□□ 0.42
PRKCH-201ENST00000332981 BRPF3Q9ULD4 1205 aa17.65■□□□□ 0.42
PRKCH-201ENST00000332981 KTN1Q86UP2 1357 aaKnown RBP17.65■□□□□ 0.42
PRKCH-201ENST00000332981 CLUAP1Q96AJ1 413 aa17.64■□□□□ 0.41
PRKCH-201ENST00000332981 ADAMTS8Q9UP79 889 aa17.64■□□□□ 0.41
PRKCH-201ENST00000332981 PRDM2Q13029 1718 aa17.63■□□□□ 0.41
PRKCH-201ENST00000332981 SAFB2Q14151 953 aaKnown RBP eCLIP17.63■□□□□ 0.41
PRKCH-201ENST00000332981 KDM6BO15054 1643 aa17.63■□□□□ 0.41
PRKCH-201ENST00000332981 NUTM2DQ5VT03 806 aaPredicted RBP17.62■□□□□ 0.41
PRKCH-201ENST00000332981 TCERG1O14776 1098 aaKnown RBP17.61■□□□□ 0.41
PRKCH-201ENST00000332981 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
PRKCH-201ENST00000332981 JPH4Q96JJ6 628 aa17.61■□□□□ 0.41
PRKCH-201ENST00000332981 MAP3K1Q13233 1512 aa17.6■□□□□ 0.41
PRKCH-201ENST00000332981 KIF15Q9NS87 1388 aa17.6■□□□□ 0.41
PRKCH-201ENST00000332981 ANKRD30AQ9BXX3 1397 aa17.6■□□□□ 0.41
PRKCH-201ENST00000332981 RALBP1Q15311 655 aa17.59■□□□□ 0.41
PRKCH-201ENST00000332981 DAPK1P53355 1430 aa17.58■□□□□ 0.4
PRKCH-201ENST00000332981 EPRSP07814 1512 aaKnown RBP17.58■□□□□ 0.4
PRKCH-201ENST00000332981 ABCC5O15440 1437 aa17.57■□□□□ 0.4
PRKCH-201ENST00000332981 SNAPC4Q5SXM2 1469 aa17.57■□□□□ 0.4
PRKCH-201ENST00000332981 APAF1O14727 1248 aa17.57■□□□□ 0.4
PRKCH-201ENST00000332981 TMF1P82094 1093 aa17.57■□□□□ 0.4
PRKCH-201ENST00000332981 GZF1Q9H116 711 aaPredicted RBP17.57■□□□□ 0.4
PRKCH-201ENST00000332981 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
PRKCH-201ENST00000332981 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.57■□□□□ 0.4
PRKCH-201ENST00000332981 SMG6Q86US8 1419 aaKnown RBP17.56■□□□□ 0.4
PRKCH-201ENST00000332981 MAGI3Q5TCQ9 1506 aa17.56■□□□□ 0.4
PRKCH-201ENST00000332981 THOC2Q8NI27 1593 aaKnown RBP17.55■□□□□ 0.4
PRKCH-201ENST00000332981 URB2Q14146 1524 aaKnown RBP17.55■□□□□ 0.4
PRKCH-201ENST00000332981 EFCAB5A4FU69 1503 aa17.54■□□□□ 0.4
PRKCH-201ENST00000332981 ANKRD50Q9ULJ7 1429 aa17.54■□□□□ 0.4
PRKCH-201ENST00000332981 BACH2Q9BYV9 841 aa17.54■□□□□ 0.4
PRKCH-201ENST00000332981 SUPT6HQ7KZ85 1726 aaKnown RBP17.54■□□□□ 0.4
PRKCH-201ENST00000332981 BCAR3O75815 825 aa17.53■□□□□ 0.4
PRKCH-201ENST00000332981 PPM1GO15355 546 aaPredicted RBP17.53■□□□□ 0.4
PRKCH-201ENST00000332981 COG6Q9Y2V7 657 aa17.53■□□□□ 0.4
PRKCH-201ENST00000332981 EHBP1L1Q8N3D4 1523 aa17.51■□□□□ 0.39
PRKCH-201ENST00000332981 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.51■□□□□ 0.39
PRKCH-201ENST00000332981 FRAT2O75474 233 aaPredicted RBP17.5■□□□□ 0.39
PRKCH-201ENST00000332981 NFKBIBQ15653 356 aa17.5■□□□□ 0.39
PRKCH-201ENST00000332981 RPRD2Q5VT52 1461 aaKnown RBP17.5■□□□□ 0.39
PRKCH-201ENST00000332981 DHX29Q7Z478 1369 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms