RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 FANCAO15360 1455 aa25.1■■□□□ 1.61
LRRC28-202ENST00000331450 ARHGAP5Q13017 1502 aa25.1■■□□□ 1.61
LRRC28-202ENST00000331450 CCNB3Q8WWL7 1395 aa25.07■■□□□ 1.6
LRRC28-202ENST00000331450 SAMD9LQ8IVG5 1584 aa25.05■■□□□ 1.6
LRRC28-202ENST00000331450 KDM6BO15054 1643 aa25.05■■□□□ 1.6
LRRC28-202ENST00000331450 PHLDB1Q86UU1 1377 aa25.03■■□□□ 1.6
LRRC28-202ENST00000331450 ABCC1P33527 1531 aa25.02■■□□□ 1.6
LRRC28-202ENST00000331450 MYOM3Q5VTT5 1437 aa25.02■■□□□ 1.6
LRRC28-202ENST00000331450 AKNAQ7Z591 1439 aa25.02■■□□□ 1.6
LRRC28-202ENST00000331450 RICTORQ6R327 1708 aa25■■□□□ 1.59
LRRC28-202ENST00000331450 FRMPD1Q5SYB0 1578 aa24.99■■□□□ 1.59
LRRC28-202ENST00000331450 COL17A1Q9UMD9 1497 aaPredicted RBP24.99■■□□□ 1.59
LRRC28-202ENST00000331450 EFCAB2Q5VUJ9 269 aa24.98■■□□□ 1.59
LRRC28-202ENST00000331450 ADGRL1O94910 1474 aa24.97■■□□□ 1.59
LRRC28-202ENST00000331450 MIA2Q96PC5 1412 aa24.95■■□□□ 1.59
LRRC28-202ENST00000331450 SYCP2Q9BX26 1530 aa24.93■■□□□ 1.58
LRRC28-202ENST00000331450 ARHGEF12Q9NZN5 1544 aa24.93■■□□□ 1.58
LRRC28-202ENST00000331450 CFDP1Q9UEE9 299 aaPredicted RBP24.93■■□□□ 1.58
LRRC28-202ENST00000331450 CAMSAP2Q08AD1 1489 aa24.93■■□□□ 1.58
LRRC28-202ENST00000331450 PTPN23Q9H3S7 1636 aa24.93■■□□□ 1.58
LRRC28-202ENST00000331450 PLEKHH2Q8IVE3 1493 aa24.91■■□□□ 1.58
LRRC28-202ENST00000331450 FGD6Q6ZV73 1430 aa24.91■■□□□ 1.58
LRRC28-202ENST00000331450 DENND4BO75064 1496 aaPredicted RBP24.9■■□□□ 1.58
LRRC28-202ENST00000331450 SCAPERQ9BY12 1400 aa24.9■■□□□ 1.58
LRRC28-202ENST00000331450 PPARGC1BQ86YN6 1023 aaKnown RBP24.9■■□□□ 1.58
LRRC28-202ENST00000331450 KDM5CP41229 1560 aa24.89■■□□□ 1.58
LRRC28-202ENST00000331450 POGZQ7Z3K3 1410 aa24.89■■□□□ 1.58
LRRC28-202ENST00000331450 KIAA1107Q9UPP5 1409 aa24.89■■□□□ 1.58
LRRC28-202ENST00000331450 ZMYM4Q5VZL5 1548 aa24.89■■□□□ 1.57
LRRC28-202ENST00000331450 TCOF1Q13428 1488 aaKnown RBP24.89■■□□□ 1.57
LRRC28-202ENST00000331450 ARHGEF5Q12774 1597 aa24.86■■□□□ 1.57
LRRC28-202ENST00000331450 ZNF518AQ6AHZ1 1483 aa24.85■■□□□ 1.57
LRRC28-202ENST00000331450 MBD5Q9P267 1494 aa24.85■■□□□ 1.57
LRRC28-202ENST00000331450 ZNF644Q9H582 1327 aaPredicted RBP24.85■■□□□ 1.57
LRRC28-202ENST00000331450 ZNF777Q9ULD5 760 aaPredicted RBP24.84■■□□□ 1.57
LRRC28-202ENST00000331450 TRAPPC8Q9Y2L5 1435 aa24.83■■□□□ 1.57
LRRC28-202ENST00000331450 CROCC2H7BZ55 1655 aa24.82■■□□□ 1.56
LRRC28-202ENST00000331450 HECW2Q9P2P5 1572 aa24.81■■□□□ 1.56
LRRC28-202ENST00000331450 DNMT1P26358 1616 aaKnown RBP24.8■■□□□ 1.56
LRRC28-202ENST00000331450 INO80Q9ULG1 1556 aaPredicted RBP24.8■■□□□ 1.56
LRRC28-202ENST00000331450 RAPGEF3O95398 923 aa24.79■■□□□ 1.56
LRRC28-202ENST00000331450 KIDINS220Q9ULH0 1771 aa24.77■■□□□ 1.56
LRRC28-202ENST00000331450 CCDC141Q6ZP82 1450 aa24.77■■□□□ 1.56
LRRC28-202ENST00000331450 RRBP1Q9P2E9 1410 aaKnown RBP24.77■■□□□ 1.56
LRRC28-202ENST00000331450 ARHGEF40Q8TER5 1519 aa24.76■■□□□ 1.55
LRRC28-202ENST00000331450 HNRNPMP52272 730 aaKnown RBP eCLIP24.75■■□□□ 1.55
LRRC28-202ENST00000331450 MAGI2Q86UL8 1455 aa24.75■■□□□ 1.55
LRRC28-202ENST00000331450 MLH3Q9UHC1 1453 aa24.74■■□□□ 1.55
LRRC28-202ENST00000331450 ZFYVE16Q7Z3T8 1539 aa24.74■■□□□ 1.55
LRRC28-202ENST00000331450 MAST1Q9Y2H9 1570 aa24.74■■□□□ 1.55
LRRC28-202ENST00000331450 ABCA6Q8N139 1617 aa24.72■■□□□ 1.55
LRRC28-202ENST00000331450 AFAP1Q8N556 730 aa24.72■■□□□ 1.55
LRRC28-202ENST00000331450 ATP7AQ04656 1500 aa24.71■■□□□ 1.55
LRRC28-202ENST00000331450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.71■■□□□ 1.55
LRRC28-202ENST00000331450 DIP2CQ9Y2E4 1556 aa24.7■■□□□ 1.54
LRRC28-202ENST00000331450 SHANK2Q9UPX8 1470 aa24.7■■□□□ 1.54
LRRC28-202ENST00000331450 DAPK1P53355 1430 aa24.69■■□□□ 1.54
LRRC28-202ENST00000331450 ADGBQ8N7X0 1667 aa24.68■■□□□ 1.54
LRRC28-202ENST00000331450 YEATS2Q9ULM3 1422 aa24.68■■□□□ 1.54
LRRC28-202ENST00000331450 RSPH4AQ5TD94 716 aa24.67■■□□□ 1.54
LRRC28-202ENST00000331450 ABCC5O15440 1437 aa24.67■■□□□ 1.54
LRRC28-202ENST00000331450 RTEL1-TNFRSF6BF6WH68 1400 aa24.65■■□□□ 1.54
LRRC28-202ENST00000331450 PLXNC1O60486 1568 aa24.65■■□□□ 1.54
LRRC28-202ENST00000331450 SIGLEC1Q9BZZ2 1709 aa24.64■■□□□ 1.54
LRRC28-202ENST00000331450 REREQ9P2R6 1566 aa24.64■■□□□ 1.54
LRRC28-202ENST00000331450 SPAG9O60271 1321 aaKnown RBP24.62■■□□□ 1.53
LRRC28-202ENST00000331450 FAM50AQ14320 339 aaKnown RBP24.62■■□□□ 1.53
LRRC28-202ENST00000331450 C9orf84Q5VXU9 1444 aa24.61■■□□□ 1.53
LRRC28-202ENST00000331450 ATP10AO60312 1499 aa24.58■■□□□ 1.52
LRRC28-202ENST00000331450 ADGRL2O95490 1459 aa24.58■■□□□ 1.52
LRRC28-202ENST00000331450 PTPRKQ15262 1439 aa24.56■■□□□ 1.52
LRRC28-202ENST00000331450 TSPY4P0CV99 314 aa24.54■■□□□ 1.52
LRRC28-202ENST00000331450 TSPY10P0CW01 314 aa24.54■■□□□ 1.52
LRRC28-202ENST00000331450 BCORL1Q5H9F3 1711 aa24.52■■□□□ 1.52
LRRC28-202ENST00000331450 A2MP01023 1474 aa24.51■■□□□ 1.51
LRRC28-202ENST00000331450 AGLP35573 1532 aa24.51■■□□□ 1.51
LRRC28-202ENST00000331450 MYT1LQ9UL68 1186 aa24.49■■□□□ 1.51
LRRC28-202ENST00000331450 NCOA1Q15788 1441 aa24.48■■□□□ 1.51
LRRC28-202ENST00000331450 EIF2AK4Q9P2K8 1649 aaKnown RBP24.48■■□□□ 1.51
LRRC28-202ENST00000331450 DUOX2Q9NRD8 1548 aa24.47■■□□□ 1.51
LRRC28-202ENST00000331450 ROCK1Q13464 1354 aa24.46■■□□□ 1.51
LRRC28-202ENST00000331450 GCC2Q8IWJ2 1684 aa24.46■■□□□ 1.51
LRRC28-202ENST00000331450 ANKRD30AQ9BXX3 1397 aa24.45■■□□□ 1.5
LRRC28-202ENST00000331450 KIF15Q9NS87 1388 aa24.44■■□□□ 1.5
LRRC28-202ENST00000331450 DHX29Q7Z478 1369 aaKnown RBP24.43■■□□□ 1.5
LRRC28-202ENST00000331450 CHIC2Q9UKJ5 165 aa24.42■■□□□ 1.5
LRRC28-202ENST00000331450 RNF17Q9BXT8 1623 aaKnown RBP24.41■■□□□ 1.5
LRRC28-202ENST00000331450 ADAMTSL3P82987 1691 aa24.4■■□□□ 1.5
LRRC28-202ENST00000331450 ITGAEP38570 1179 aa24.4■■□□□ 1.5
LRRC28-202ENST00000331450 ERBINQ96RT1 1412 aa24.4■■□□□ 1.5
LRRC28-202ENST00000331450 DEPDC5O75140 1603 aa24.38■■□□□ 1.49
LRRC28-202ENST00000331450 MROH1Q8NDA8 1641 aa24.36■■□□□ 1.49
LRRC28-202ENST00000331450 RRP7BPQ9NSQ0 103 aa24.36■■□□□ 1.49
LRRC28-202ENST00000331450 FER1L4A9Z1Z3 1794 aa24.35■■□□□ 1.49
LRRC28-202ENST00000331450 MADDQ8WXG6 1647 aa24.33■■□□□ 1.49
LRRC28-202ENST00000331450 HFM1A2PYH4 1435 aa24.33■■□□□ 1.49
LRRC28-202ENST00000331450 NAIPQ13075 1403 aa24.32■■□□□ 1.48
LRRC28-202ENST00000331450 ANKRD50Q9ULJ7 1429 aa24.32■■□□□ 1.48
LRRC28-202ENST00000331450 PRDM15P57071 1507 aaPredicted RBP24.31■■□□□ 1.48
LRRC28-202ENST00000331450 ARID4BQ4LE39 1312 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms