RNA–Protein interactions for RNA: ENST00000330398.8

ATP6V0C-201, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V0C, Length 1,175 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-201ENST00000330398 ARHGAP5Q13017 1502 aa28.76■■■□□ 2.19
ATP6V0C-201ENST00000330398 GPATCH8Q9UKJ3 1502 aaKnown RBP28.76■■■□□ 2.19
ATP6V0C-201ENST00000330398 CDC42BPAQ5VT25 1732 aa28.74■■■□□ 2.19
ATP6V0C-201ENST00000330398 ADGRL1O94910 1474 aa28.74■■■□□ 2.19
ATP6V0C-201ENST00000330398 LRRC9Q6ZRR7 1453 aa28.74■■■□□ 2.19
ATP6V0C-201ENST00000330398 SCAPERQ9BY12 1400 aa28.73■■■□□ 2.19
ATP6V0C-201ENST00000330398 CCNB3Q8WWL7 1395 aa28.72■■■□□ 2.19
ATP6V0C-201ENST00000330398 FRMPD1Q5SYB0 1578 aa28.71■■■□□ 2.19
ATP6V0C-201ENST00000330398 RICTORQ6R327 1708 aa28.7■■■□□ 2.19
ATP6V0C-201ENST00000330398 APLP2Q06481 763 aa28.68■■■□□ 2.18
ATP6V0C-201ENST00000330398 KANK4Q5T7N3 995 aaPredicted RBP28.68■■■□□ 2.18
ATP6V0C-201ENST00000330398 SUPT6HQ7KZ85 1726 aaKnown RBP28.67■■■□□ 2.18
ATP6V0C-201ENST00000330398 NCOA2Q15596 1464 aa28.66■■■□□ 2.18
ATP6V0C-201ENST00000330398 CFDP1Q9UEE9 299 aaPredicted RBP28.66■■■□□ 2.18
ATP6V0C-201ENST00000330398 POGZQ7Z3K3 1410 aa28.66■■■□□ 2.18
ATP6V0C-201ENST00000330398 ZMYM4Q5VZL5 1548 aa28.64■■■□□ 2.17
ATP6V0C-201ENST00000330398 MAGI2Q86UL8 1455 aa28.61■■■□□ 2.17
ATP6V0C-201ENST00000330398 ABCC1P33527 1531 aa28.6■■■□□ 2.17
ATP6V0C-201ENST00000330398 ZNF518AQ6AHZ1 1483 aa28.59■■■□□ 2.17
ATP6V0C-201ENST00000330398 ARHGEF12Q9NZN5 1544 aa28.59■■■□□ 2.17
ATP6V0C-201ENST00000330398 KIAA1107Q9UPP5 1409 aa28.59■■■□□ 2.17
ATP6V0C-201ENST00000330398 ITSN2Q9NZM3 1697 aa28.58■■■□□ 2.17
ATP6V0C-201ENST00000330398 SAMD9LQ8IVG5 1584 aa28.58■■■□□ 2.17
ATP6V0C-201ENST00000330398 ZNF777Q9ULD5 760 aaPredicted RBP28.57■■■□□ 2.16
ATP6V0C-201ENST00000330398 PLEKHH2Q8IVE3 1493 aa28.57■■■□□ 2.16
ATP6V0C-201ENST00000330398 AFAP1Q8N556 730 aa28.56■■■□□ 2.16
ATP6V0C-201ENST00000330398 KDM5CP41229 1560 aa28.55■■■□□ 2.16
ATP6V0C-201ENST00000330398 TRAPPC8Q9Y2L5 1435 aa28.53■■■□□ 2.16
ATP6V0C-201ENST00000330398 ARHGEF40Q8TER5 1519 aa28.51■■■□□ 2.15
ATP6V0C-201ENST00000330398 ZFYVE16Q7Z3T8 1539 aa28.49■■■□□ 2.15
ATP6V0C-201ENST00000330398 MLH3Q9UHC1 1453 aa28.49■■■□□ 2.15
ATP6V0C-201ENST00000330398 HNRNPMP52272 730 aaKnown RBP eCLIP28.49■■■□□ 2.157e-8■■□□□ 12.1
ATP6V0C-201ENST00000330398 ZNF644Q9H582 1327 aaPredicted RBP28.48■■■□□ 2.15
ATP6V0C-201ENST00000330398 KDM4FA0A1W2PPD8 638 aa28.48■■■□□ 2.15
ATP6V0C-201ENST00000330398 YEATS2Q9ULM3 1422 aa28.48■■■□□ 2.15
ATP6V0C-201ENST00000330398 SYCP2Q9BX26 1530 aa28.48■■■□□ 2.15
ATP6V0C-201ENST00000330398 MYOM3Q5VTT5 1437 aa28.45■■■□□ 2.15
ATP6V0C-201ENST00000330398 MIA2Q96PC5 1412 aa28.45■■■□□ 2.15
ATP6V0C-201ENST00000330398 MBD5Q9P267 1494 aa28.45■■■□□ 2.14
ATP6V0C-201ENST00000330398 HECW2Q9P2P5 1572 aa28.42■■■□□ 2.14
ATP6V0C-201ENST00000330398 ATP10AO60312 1499 aa28.42■■■□□ 2.14
ATP6V0C-201ENST00000330398 RSPH4AQ5TD94 716 aa28.42■■■□□ 2.14
ATP6V0C-201ENST00000330398 CAMSAP2Q08AD1 1489 aa28.4■■■□□ 2.14
ATP6V0C-201ENST00000330398 SPAG9O60271 1321 aaKnown RBP28.38■■■□□ 2.13
ATP6V0C-201ENST00000330398 KIDINS220Q9ULH0 1771 aa28.36■■■□□ 2.13
ATP6V0C-201ENST00000330398 C9orf84Q5VXU9 1444 aa28.35■■■□□ 2.13
ATP6V0C-201ENST00000330398 MYT1LQ9UL68 1186 aa28.35■■■□□ 2.13
ATP6V0C-201ENST00000330398 DIP2CQ9Y2E4 1556 aa28.33■■■□□ 2.13
ATP6V0C-201ENST00000330398 ARHGEF5Q12774 1597 aa28.33■■■□□ 2.12
ATP6V0C-201ENST00000330398 REREQ9P2R6 1566 aa28.33■■■□□ 2.12
ATP6V0C-201ENST00000330398 ARID4BQ4LE39 1312 aaPredicted RBP28.32■■■□□ 2.12
ATP6V0C-201ENST00000330398 RTEL1-TNFRSF6BF6WH68 1400 aa28.32■■■□□ 2.12
ATP6V0C-201ENST00000330398 AEBP2Q6ZN18 517 aaPredicted RBP28.31■■■□□ 2.12
ATP6V0C-201ENST00000330398 CCDC141Q6ZP82 1450 aa28.31■■■□□ 2.12
ATP6V0C-201ENST00000330398 ABCA6Q8N139 1617 aa28.31■■■□□ 2.12
ATP6V0C-201ENST00000330398 INO80Q9ULG1 1556 aaPredicted RBP28.29■■■□□ 2.12
ATP6V0C-201ENST00000330398 ATP7AQ04656 1500 aa28.29■■■□□ 2.12
ATP6V0C-201ENST00000330398 FGD6Q6ZV73 1430 aa28.29■■■□□ 2.12
ATP6V0C-201ENST00000330398 BCORL1Q5H9F3 1711 aa28.28■■■□□ 2.12
ATP6V0C-201ENST00000330398 SIGLEC1Q9BZZ2 1709 aa28.28■■■□□ 2.12
ATP6V0C-201ENST00000330398 ADAMTSL3P82987 1691 aa28.26■■■□□ 2.12
ATP6V0C-201ENST00000330398 TCOF1Q13428 1488 aaKnown RBP28.25■■■□□ 2.11
ATP6V0C-201ENST00000330398 AGLP35573 1532 aa28.24■■■□□ 2.11
ATP6V0C-201ENST00000330398 TSPY4P0CV99 314 aa28.24■■■□□ 2.11
ATP6V0C-201ENST00000330398 TSPY10P0CW01 314 aa28.24■■■□□ 2.11
ATP6V0C-201ENST00000330398 PTPN23Q9H3S7 1636 aa28.24■■■□□ 2.11
ATP6V0C-201ENST00000330398 PPARGC1BQ86YN6 1023 aaKnown RBP28.19■■■□□ 2.1
ATP6V0C-201ENST00000330398 MAST1Q9Y2H9 1570 aa28.17■■■□□ 2.1
ATP6V0C-201ENST00000330398 A2MP01023 1474 aa28.17■■■□□ 2.1
ATP6V0C-201ENST00000330398 ADGBQ8N7X0 1667 aa28.15■■■□□ 2.1
ATP6V0C-201ENST00000330398 PLXNC1O60486 1568 aa28.15■■■□□ 2.1
ATP6V0C-201ENST00000330398 ABCC5O15440 1437 aa28.14■■■□□ 2.1
ATP6V0C-201ENST00000330398 DHX29Q7Z478 1369 aaKnown RBP28.13■■■□□ 2.09
ATP6V0C-201ENST00000330398 MADDQ8WXG6 1647 aa28.12■■■□□ 2.09
ATP6V0C-201ENST00000330398 MLECQ14165 292 aa28.12■■■□□ 2.09
ATP6V0C-201ENST00000330398 SHANK2Q9UPX8 1470 aa28.11■■■□□ 2.09
ATP6V0C-201ENST00000330398 PTPRMP28827 1452 aa28.1■■■□□ 2.09
ATP6V0C-201ENST00000330398 DNMT1P26358 1616 aaKnown RBP28.1■■■□□ 2.09
ATP6V0C-201ENST00000330398 DAPK1P53355 1430 aa28.09■■■□□ 2.09
ATP6V0C-201ENST00000330398 CROCC2H7BZ55 1655 aa28.05■■■□□ 2.08
ATP6V0C-201ENST00000330398 FAM50AQ14320 339 aaKnown RBP28.05■■■□□ 2.08
ATP6V0C-201ENST00000330398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.05■■■□□ 2.084e-6■■□□□ 12.8
ATP6V0C-201ENST00000330398 PPP6R1Q9UPN7 881 aa28.03■■■□□ 2.08
ATP6V0C-201ENST00000330398 FER1L4A9Z1Z3 1794 aa28.03■■■□□ 2.08
ATP6V0C-201ENST00000330398 RIMS1Q86UR5 1692 aaKnown RBP28.02■■■□□ 2.08
ATP6V0C-201ENST00000330398 CNTLNQ9NXG0 1405 aa27.97■■■□□ 2.07
ATP6V0C-201ENST00000330398 RRBP1Q9P2E9 1410 aaKnown RBP27.96■■■□□ 2.07
ATP6V0C-201ENST00000330398 KIF3BO15066 747 aa27.96■■■□□ 2.07
ATP6V0C-201ENST00000330398 DUOX2Q9NRD8 1548 aa27.96■■■□□ 2.07
ATP6V0C-201ENST00000330398 ANKRD30AQ9BXX3 1397 aa27.96■■■□□ 2.07
ATP6V0C-201ENST00000330398 NCOA1Q15788 1441 aa27.95■■■□□ 2.07
ATP6V0C-201ENST00000330398 GGT6Q6P531 493 aa27.95■■■□□ 2.06
ATP6V0C-201ENST00000330398 ESF1Q9H501 851 aaKnown RBP27.95■■■□□ 2.06
ATP6V0C-201ENST00000330398 KIF15Q9NS87 1388 aa27.95■■■□□ 2.06
ATP6V0C-201ENST00000330398 ADGRL2O95490 1459 aa27.95■■■□□ 2.06
ATP6V0C-201ENST00000330398 CHIC2Q9UKJ5 165 aa27.93■■■□□ 2.06
ATP6V0C-201ENST00000330398 RRP7BPQ9NSQ0 103 aa27.92■■■□□ 2.06
ATP6V0C-201ENST00000330398 EIF2AK4Q9P2K8 1649 aaKnown RBP27.9■■■□□ 2.06
ATP6V0C-201ENST00000330398 PTPRKQ15262 1439 aa27.9■■■□□ 2.06
ATP6V0C-201ENST00000330398 ERBINQ96RT1 1412 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms