RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 NCOA1Q15788 1441 aa11.23□□□□□ -0.61
SKA2-201ENST00000330137 PKNOX2Q96KN3 472 aa11.22□□□□□ -0.61
SKA2-201ENST00000330137 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.22□□□□□ -0.61
SKA2-201ENST00000330137 CCDC18Q5T9S5 1454 aa11.22□□□□□ -0.61
SKA2-201ENST00000330137 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.62
SKA2-201ENST00000330137 PTPN23Q9H3S7 1636 aa11.2□□□□□ -0.62
SKA2-201ENST00000330137 EIF4G2P78344 907 aaKnown RBP eCLIP11.2□□□□□ -0.626e-6■■■■□ 25.1
SKA2-201ENST00000330137 HIRIP3Q9BW71 556 aaPredicted RBP11.2□□□□□ -0.62
SKA2-201ENST00000330137 OSCARQ8IYS5 282 aa11.19□□□□□ -0.62
SKA2-201ENST00000330137 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
SKA2-201ENST00000330137 BACH2Q9BYV9 841 aa11.18□□□□□ -0.62
SKA2-201ENST00000330137 MRS2Q9HD23 443 aa11.18□□□□□ -0.62
SKA2-201ENST00000330137 CCDC7Q96M83 1385 aa11.18□□□□□ -0.62
SKA2-201ENST00000330137 FYCO1Q9BQS8 1478 aa11.18□□□□□ -0.62
SKA2-201ENST00000330137 EIF5BO60841 1220 aaKnown RBP11.17□□□□□ -0.62
SKA2-201ENST00000330137 RANGAP1P46060 587 aaPredicted RBP11.17□□□□□ -0.62
SKA2-201ENST00000330137 HSPA5P11021 654 aaKnown RBP11.16□□□□□ -0.62
SKA2-201ENST00000330137 HECW1Q76N89 1606 aa11.16□□□□□ -0.62
SKA2-201ENST00000330137 GAPVD1Q14C86 1478 aa11.16□□□□□ -0.62
SKA2-201ENST00000330137 SNAPC4Q5SXM2 1469 aa11.16□□□□□ -0.62
SKA2-201ENST00000330137 PDE4AP27815 886 aa11.16□□□□□ -0.62
SKA2-201ENST00000330137 CHMP7Q8WUX9 453 aaPredicted RBP11.16□□□□□ -0.62
SKA2-201ENST00000330137 ABCA10Q8WWZ4 1543 aa11.16□□□□□ -0.62
SKA2-201ENST00000330137 FMN1Q68DA7 1419 aa11.15□□□□□ -0.62
SKA2-201ENST00000330137 GRIN2BQ13224 1484 aa11.15□□□□□ -0.62
SKA2-201ENST00000330137 FAM50AQ14320 339 aaKnown RBP11.15□□□□□ -0.63
SKA2-201ENST00000330137 PBRM1Q86U86 1689 aa11.15□□□□□ -0.63
SKA2-201ENST00000330137 AKNAQ7Z591 1439 aa11.14□□□□□ -0.63
SKA2-201ENST00000330137 CHD1O14646 1710 aa11.14□□□□□ -0.63
SKA2-201ENST00000330137 BRPF3Q9ULD4 1205 aa11.14□□□□□ -0.63
SKA2-201ENST00000330137 FGD6Q6ZV73 1430 aa11.14□□□□□ -0.63
SKA2-201ENST00000330137 EFCAB5A4FU69 1503 aa11.14□□□□□ -0.63
SKA2-201ENST00000330137 FAM9BQ8IZU0 186 aa11.13□□□□□ -0.63
SKA2-201ENST00000330137 ARID4BQ4LE39 1312 aaPredicted RBP11.13□□□□□ -0.63
SKA2-201ENST00000330137 PCF11O94913 1555 aaKnown RBP11.12□□□□□ -0.63
SKA2-201ENST00000330137 CCDC184Q52MB2 194 aa11.12□□□□□ -0.63
SKA2-201ENST00000330137 NAIPQ13075 1403 aa11.12□□□□□ -0.63
SKA2-201ENST00000330137 CASKIN1Q8WXD9 1431 aa11.12□□□□□ -0.63
SKA2-201ENST00000330137 NFKBIBQ15653 356 aa11.11□□□□□ -0.63
SKA2-201ENST00000330137 KTN1Q86UP2 1357 aaKnown RBP11.11□□□□□ -0.63
SKA2-201ENST00000330137 GCC2Q8IWJ2 1684 aa11.1□□□□□ -0.63
SKA2-201ENST00000330137 MAGI1Q96QZ7 1491 aaPredicted RBP11.1□□□□□ -0.63
SKA2-201ENST00000330137 LAS1LQ9Y4W2 734 aaKnown RBP11.1□□□□□ -0.63
SKA2-201ENST00000330137 MIA2Q96PC5 1412 aa11.1□□□□□ -0.63
SKA2-201ENST00000330137 SPATA31E1Q6ZUB1 1445 aa11.1□□□□□ -0.63
SKA2-201ENST00000330137 FRAT1Q92837 279 aaPredicted RBP11.09□□□□□ -0.63
SKA2-201ENST00000330137 PDE3BQ13370 1112 aa11.08□□□□□ -0.64
SKA2-201ENST00000330137 RRP9O43818 475 aaKnown RBP11.07□□□□□ -0.64
SKA2-201ENST00000330137 INSRP06213 1382 aa11.07□□□□□ -0.64
SKA2-201ENST00000330137 SYNJ2O15056 1496 aa11.07□□□□□ -0.64
SKA2-201ENST00000330137 RRP1P56182 461 aaKnown RBP11.07□□□□□ -0.64
SKA2-201ENST00000330137 ZMYM4Q5VZL5 1548 aa11.06□□□□□ -0.64
SKA2-201ENST00000330137 ROCK2O75116 1388 aaKnown RBP11.05□□□□□ -0.64
SKA2-201ENST00000330137 LRPPRCP42704 1394 aaKnown RBP11.05□□□□□ -0.64
SKA2-201ENST00000330137 L1TD1Q5T7N2 865 aaKnown RBP11.05□□□□□ -0.64
SKA2-201ENST00000330137 IGF1RP08069 1367 aa11.05□□□□□ -0.64
SKA2-201ENST00000330137 DHX29Q7Z478 1369 aaKnown RBP11.04□□□□□ -0.64
SKA2-201ENST00000330137 NPM2Q86SE8 214 aaKnown RBP11.04□□□□□ -0.64
SKA2-201ENST00000330137 DAXXQ9UER7 740 aaPredicted RBP11.04□□□□□ -0.64
SKA2-201ENST00000330137 KIF7Q2M1P5 1343 aa11.03□□□□□ -0.64
SKA2-201ENST00000330137 ADAMTS12P58397 1594 aa11.02□□□□□ -0.64
SKA2-201ENST00000330137 PTPRKQ15262 1439 aa11.02□□□□□ -0.65
SKA2-201ENST00000330137 PNISRQ8TF01 805 aaKnown RBP11.02□□□□□ -0.65
SKA2-201ENST00000330137 MYOM3Q5VTT5 1437 aa11.02□□□□□ -0.65
SKA2-201ENST00000330137 TCOF1Q13428 1488 aaKnown RBP11.01□□□□□ -0.65
SKA2-201ENST00000330137 RPRD2Q5VT52 1461 aaKnown RBP11.01□□□□□ -0.65
SKA2-201ENST00000330137 BRD4O60885 1362 aaPredicted RBP11.01□□□□□ -0.65
SKA2-201ENST00000330137 CARMIL1Q5VZK9 1371 aa11.01□□□□□ -0.65
SKA2-201ENST00000330137 DENND4BO75064 1496 aaPredicted RBP11.01□□□□□ -0.65
SKA2-201ENST00000330137 GRIN2AQ12879 1464 aa11□□□□□ -0.65
SKA2-201ENST00000330137 ZMYND15Q9H091 742 aa11□□□□□ -0.65
SKA2-201ENST00000330137 SUPT6HQ7KZ85 1726 aaKnown RBP11□□□□□ -0.65
SKA2-201ENST00000330137 TEX14Q8IWB6 1497 aa10.99□□□□□ -0.65
SKA2-201ENST00000330137 RCAN3Q9UKA8 241 aa10.99□□□□□ -0.65
SKA2-201ENST00000330137 ARHGEF11O15085 1522 aa10.98□□□□□ -0.65
SKA2-201ENST00000330137 RIMBP3CA6NJZ7 1639 aa10.98□□□□□ -0.65
SKA2-201ENST00000330137 RIMBP3BA6NNM3 1639 aa10.98□□□□□ -0.65
SKA2-201ENST00000330137 RIMBP3Q9UFD9 1639 aa10.98□□□□□ -0.65
SKA2-201ENST00000330137 EHBP1L1Q8N3D4 1523 aa10.98□□□□□ -0.65
SKA2-201ENST00000330137 CENPJQ9HC77 1338 aaPredicted RBP10.97□□□□□ -0.65
SKA2-201ENST00000330137 CLCN1P35523 988 aa10.97□□□□□ -0.65
SKA2-201ENST00000330137 HSP90AA2PQ14568 343 aaPredicted RBP10.97□□□□□ -0.65
SKA2-201ENST00000330137 EXOC6Q8TAG9 804 aa10.97□□□□□ -0.65
SKA2-201ENST00000330137 PLEKHH2Q8IVE3 1493 aa10.97□□□□□ -0.65
SKA2-201ENST00000330137 CYB5RLQ6IPT4 315 aa10.96□□□□□ -0.66
SKA2-201ENST00000330137 CUL7Q14999 1698 aa10.96□□□□□ -0.66
SKA2-201ENST00000330137 HSP90AA1P07900 732 aaKnown RBP10.95□□□□□ -0.66
SKA2-201ENST00000330137 FAM161AQ3B820 660 aa10.95□□□□□ -0.66
SKA2-201ENST00000330137 DCAF11Q8TEB1 546 aa10.95□□□□□ -0.66
SKA2-201ENST00000330137 L3MBTL2Q969R5 705 aa10.95□□□□□ -0.66
SKA2-201ENST00000330137 KIF15Q9NS87 1388 aa10.95□□□□□ -0.66
SKA2-201ENST00000330137 RALBP1Q15311 655 aa10.95□□□□□ -0.66
SKA2-201ENST00000330137 CLASP1Q7Z460 1538 aa10.95□□□□□ -0.66
SKA2-201ENST00000330137 CEP170Q5SW79 1584 aa10.95□□□□□ -0.66
SKA2-201ENST00000330137 VSIG10Q8N0Z9 540 aa10.94□□□□□ -0.66
SKA2-201ENST00000330137 UGGT2Q9NYU1 1516 aa10.94□□□□□ -0.66
SKA2-201ENST00000330137 ANKRD30BQ9BXX2 1392 aa10.94□□□□□ -0.66
SKA2-201ENST00000330137 CENPQQ7L2Z9 268 aaPredicted RBP10.94□□□□□ -0.66
SKA2-201ENST00000330137 MTUS2Q5JR59 1369 aa10.93□□□□□ -0.66
SKA2-201ENST00000330137 TMC1Q8TDI8 760 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms