RNA–Protein interactions for RNA: ENST00000329608.10

CSF1-201, Transcript of colony stimulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-201ENST00000329608 MIA2Q96PC5 1412 aa20.42■□□□□ 0.86
CSF1-201ENST00000329608 EIF4G2P78344 907 aaKnown RBP eCLIP20.41■□□□□ 0.86
CSF1-201ENST00000329608 SYNJ2O15056 1496 aa20.4■□□□□ 0.86
CSF1-201ENST00000329608 KIAA0556O60303 1618 aa20.39■□□□□ 0.86
CSF1-201ENST00000329608 TSPY4P0CV99 314 aa20.38■□□□□ 0.85
CSF1-201ENST00000329608 TSPY10P0CW01 314 aa20.38■□□□□ 0.85
CSF1-201ENST00000329608 DAPK1P53355 1430 aa20.37■□□□□ 0.85
CSF1-201ENST00000329608 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
CSF1-201ENST00000329608 ABCC5O15440 1437 aa20.35■□□□□ 0.85
CSF1-201ENST00000329608 HNRNPMP52272 730 aaKnown RBP eCLIP20.35■□□□□ 0.85
CSF1-201ENST00000329608 TROQ12816 1431 aaPredicted RBP20.34■□□□□ 0.85
CSF1-201ENST00000329608 SUPT16HQ9Y5B9 1047 aaKnown RBP20.34■□□□□ 0.85
CSF1-201ENST00000329608 TCOF1Q13428 1488 aaKnown RBP20.34■□□□□ 0.85
CSF1-201ENST00000329608 ARHGEF11O15085 1522 aa20.34■□□□□ 0.85
CSF1-201ENST00000329608 PKD2Q13563 968 aa20.33■□□□□ 0.85
CSF1-201ENST00000329608 KDM6BO15054 1643 aa20.32■□□□□ 0.84
CSF1-201ENST00000329608 RAPGEF6Q8TEU7 1601 aa20.32■□□□□ 0.84
CSF1-201ENST00000329608 KDM2AQ9Y2K7 1162 aa20.31■□□□□ 0.84
CSF1-201ENST00000329608 CEP170Q5SW79 1584 aa20.3■□□□□ 0.84
CSF1-201ENST00000329608 NEFLP07196 543 aa20.29■□□□□ 0.84
CSF1-201ENST00000329608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.29■□□□□ 0.84
CSF1-201ENST00000329608 FKBP8Q14318 412 aa20.29■□□□□ 0.84
CSF1-201ENST00000329608 PTPRGP23470 1445 aa20.28■□□□□ 0.84
CSF1-201ENST00000329608 HNRNPUQ00839 825 aaKnown RBP eCLIP20.28■□□□□ 0.84
CSF1-201ENST00000329608 NBPF8Q3BBV2 869 aa20.27■□□□□ 0.84
CSF1-201ENST00000329608 WASHC2AQ641Q2 1341 aa20.26■□□□□ 0.83
CSF1-201ENST00000329608 ANKRD30AQ9BXX3 1397 aa20.25■□□□□ 0.83
CSF1-201ENST00000329608 CAMSAP2Q08AD1 1489 aa20.24■□□□□ 0.83
CSF1-201ENST00000329608 NUP155O75694 1391 aa20.24■□□□□ 0.83
CSF1-201ENST00000329608 CCER2I3L3R5 266 aa20.23■□□□□ 0.83
CSF1-201ENST00000329608 GPATCH8Q9UKJ3 1502 aaKnown RBP20.23■□□□□ 0.83
CSF1-201ENST00000329608 FAM9BQ8IZU0 186 aa20.22■□□□□ 0.83
CSF1-201ENST00000329608 ROCK1Q13464 1354 aa20.21■□□□□ 0.83
CSF1-201ENST00000329608 ANKRD30BQ9BXX2 1392 aa20.2■□□□□ 0.82
CSF1-201ENST00000329608 NUP160Q12769 1436 aa20.2■□□□□ 0.82
CSF1-201ENST00000329608 AKNAQ7Z591 1439 aa20.2■□□□□ 0.82
CSF1-201ENST00000329608 C11orf95C9JLR9 678 aaPredicted RBP20.2■□□□□ 0.82
CSF1-201ENST00000329608 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
CSF1-201ENST00000329608 DENND4BO75064 1496 aaPredicted RBP20.2■□□□□ 0.82
CSF1-201ENST00000329608 NCOA1Q15788 1441 aa20.18■□□□□ 0.82
CSF1-201ENST00000329608 RGL3Q3MIN7 710 aa20.18■□□□□ 0.82
CSF1-201ENST00000329608 KIF14Q15058 1648 aa20.17■□□□□ 0.82
CSF1-201ENST00000329608 ANKRD50Q9ULJ7 1429 aa20.17■□□□□ 0.82
CSF1-201ENST00000329608 ATP10BO94823 1461 aa20.17■□□□□ 0.82
CSF1-201ENST00000329608 SENP3-EIF4A1A0A087X0R7 540 aa20.17■□□□□ 0.82
CSF1-201ENST00000329608 MRS2Q9HD23 443 aa20.15■□□□□ 0.82
CSF1-201ENST00000329608 IRX6P78412 446 aaPredicted RBP20.13■□□□□ 0.81
CSF1-201ENST00000329608 DCAF11Q8TEB1 546 aa20.13■□□□□ 0.81
CSF1-201ENST00000329608 GCC2Q8IWJ2 1684 aa20.13■□□□□ 0.81
CSF1-201ENST00000329608 DNMT1P26358 1616 aaKnown RBP20.12■□□□□ 0.81
CSF1-201ENST00000329608 C9orf84Q5VXU9 1444 aa20.1■□□□□ 0.81
CSF1-201ENST00000329608 CARD11Q9BXL7 1154 aa20.1■□□□□ 0.81
CSF1-201ENST00000329608 KIF15Q9NS87 1388 aa20.1■□□□□ 0.81
CSF1-201ENST00000329608 CCDC184Q52MB2 194 aa20.1■□□□□ 0.81
CSF1-201ENST00000329608 RPRD2Q5VT52 1461 aaKnown RBP20.09■□□□□ 0.81
CSF1-201ENST00000329608 CCDC7Q96M83 1385 aa20.07■□□□□ 0.8
CSF1-201ENST00000329608 KIF7Q2M1P5 1343 aa20.07■□□□□ 0.8
CSF1-201ENST00000329608 KDM5BQ9UGL1 1544 aa20.06■□□□□ 0.8
CSF1-201ENST00000329608 KIAA1107Q9UPP5 1409 aa20.05■□□□□ 0.8
CSF1-201ENST00000329608 PRKRIP1Q9H875 184 aaPredicted RBP20.03■□□□□ 0.8
CSF1-201ENST00000329608 PZPP20742 1482 aa20.03■□□□□ 0.8
CSF1-201ENST00000329608 USP47Q96K76 1375 aa20.01■□□□□ 0.79
CSF1-201ENST00000329608 ITSN2Q9NZM3 1697 aa20■□□□□ 0.79
CSF1-201ENST00000329608 CNTLNQ9NXG0 1405 aa19.99■□□□□ 0.79
CSF1-201ENST00000329608 ABCA8O94911 1581 aa19.98■□□□□ 0.79
CSF1-201ENST00000329608 ST20-MTHFSA0A0A6YYL1 179 aa19.97■□□□□ 0.79
CSF1-201ENST00000329608 TEX14Q8IWB6 1497 aa19.97■□□□□ 0.79
CSF1-201ENST00000329608 ARHGAP5Q13017 1502 aa19.96■□□□□ 0.79
CSF1-201ENST00000329608 ABCC10Q5T3U5 1492 aa19.95■□□□□ 0.78
CSF1-201ENST00000329608 RSPH4AQ5TD94 716 aa19.93■□□□□ 0.78
CSF1-201ENST00000329608 EFCAB2Q5VUJ9 269 aa19.93■□□□□ 0.78
CSF1-201ENST00000329608 ROCK2O75116 1388 aaKnown RBP19.91■□□□□ 0.78
CSF1-201ENST00000329608 ADGRL2O95490 1459 aa19.91■□□□□ 0.78
CSF1-201ENST00000329608 TMC1Q8TDI8 760 aa19.9■□□□□ 0.78
CSF1-201ENST00000329608 AFAP1Q8N556 730 aa19.9■□□□□ 0.78
CSF1-201ENST00000329608 CCDC141Q6ZP82 1450 aa19.9■□□□□ 0.78
CSF1-201ENST00000329608 SALL2Q9Y467 1007 aaPredicted RBP19.89■□□□□ 0.77
CSF1-201ENST00000329608 ERCC6L2Q5T890 1561 aa19.88■□□□□ 0.77
CSF1-201ENST00000329608 CCDC144AA2RUR9 1427 aa19.88■□□□□ 0.77
CSF1-201ENST00000329608 CDC42BPAQ5VT25 1732 aa19.87■□□□□ 0.77
CSF1-201ENST00000329608 NBPF1Q3BBV0 1214 aa19.87■□□□□ 0.77
CSF1-201ENST00000329608 TSHZ2Q9NRE2 1034 aa19.86■□□□□ 0.77
CSF1-201ENST00000329608 SYCP2Q9BX26 1530 aa19.85■□□□□ 0.77
CSF1-201ENST00000329608 CHD1O14646 1710 aa19.85■□□□□ 0.77
CSF1-201ENST00000329608 MBD5Q9P267 1494 aa19.84■□□□□ 0.77
CSF1-201ENST00000329608 SPAG9O60271 1321 aaKnown RBP19.83■□□□□ 0.77
CSF1-201ENST00000329608 ADCY10Q96PN6 1610 aa19.83■□□□□ 0.77
CSF1-201ENST00000329608 ADGBQ8N7X0 1667 aa19.83■□□□□ 0.76
CSF1-201ENST00000329608 SPATA31E1Q6ZUB1 1445 aa19.81■□□□□ 0.76
CSF1-201ENST00000329608 PLEKHH2Q8IVE3 1493 aa19.81■□□□□ 0.76
CSF1-201ENST00000329608 MYT1Q01538 1121 aa19.81■□□□□ 0.76
CSF1-201ENST00000329608 SHANK2Q9UPX8 1470 aa19.8■□□□□ 0.76
CSF1-201ENST00000329608 SAMD9LQ8IVG5 1584 aa19.78■□□□□ 0.76
CSF1-201ENST00000329608 CC2D1BQ5T0F9 858 aaKnown RBP19.77■□□□□ 0.76
CSF1-201ENST00000329608 KIF3BO15066 747 aa19.76■□□□□ 0.75
CSF1-201ENST00000329608 NPM1P06748 294 aaKnown RBP eCLIP19.76■□□□□ 0.75
CSF1-201ENST00000329608 CHGAP10645 457 aaKnown RBP19.76■□□□□ 0.75
CSF1-201ENST00000329608 TTC37Q6PGP7 1564 aa19.75■□□□□ 0.75
CSF1-201ENST00000329608 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.75■□□□□ 0.75
CSF1-201ENST00000329608 FAM135AQ9P2D6 1515 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms