RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 GLI2P10070 1586 aa28.49■■■□□ 2.15
EXOSC3-201ENST00000327304 FAM50AQ14320 339 aaKnown RBP28.48■■■□□ 2.15
EXOSC3-201ENST00000327304 TCOF1Q13428 1488 aaKnown RBP28.47■■■□□ 2.15
EXOSC3-201ENST00000327304 ARHGAP5Q13017 1502 aa28.47■■■□□ 2.15
EXOSC3-201ENST00000327304 ZNF644Q9H582 1327 aaPredicted RBP28.46■■■□□ 2.15
EXOSC3-201ENST00000327304 FAM69CQ0P6D2 419 aa28.45■■■□□ 2.14
EXOSC3-201ENST00000327304 CD109Q6YHK3 1445 aa28.44■■■□□ 2.14
EXOSC3-201ENST00000327304 ZNF777Q9ULD5 760 aaPredicted RBP28.44■■■□□ 2.14
EXOSC3-201ENST00000327304 ARAP3Q8WWN8 1544 aa28.43■■■□□ 2.14
EXOSC3-201ENST00000327304 CAMSAP2Q08AD1 1489 aa28.43■■■□□ 2.14
EXOSC3-201ENST00000327304 MAP3K4Q9Y6R4 1608 aa28.43■■■□□ 2.14
EXOSC3-201ENST00000327304 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.42■■■□□ 2.14
EXOSC3-201ENST00000327304 KIF13AQ9H1H9 1805 aa28.41■■■□□ 2.14
EXOSC3-201ENST00000327304 SAMD9LQ8IVG5 1584 aa28.4■■■□□ 2.14
EXOSC3-201ENST00000327304 EFCAB2Q5VUJ9 269 aa28.37■■■□□ 2.13
EXOSC3-201ENST00000327304 FANCAO15360 1455 aa28.35■■■□□ 2.13
EXOSC3-201ENST00000327304 ITGAEP38570 1179 aa28.34■■■□□ 2.13
EXOSC3-201ENST00000327304 SYCP2Q9BX26 1530 aa28.29■■■□□ 2.12
EXOSC3-201ENST00000327304 ABCC1P33527 1531 aa28.29■■■□□ 2.12
EXOSC3-201ENST00000327304 TSPOAP1O95153 1857 aa28.29■■■□□ 2.12
EXOSC3-201ENST00000327304 PPRC1Q5VV67 1664 aaKnown RBP28.28■■■□□ 2.12
EXOSC3-201ENST00000327304 DNMT1P26358 1616 aaKnown RBP28.28■■■□□ 2.12
EXOSC3-201ENST00000327304 PLEKHH2Q8IVE3 1493 aa28.27■■■□□ 2.12
EXOSC3-201ENST00000327304 HNRNPMP52272 730 aaKnown RBP eCLIP28.27■■■□□ 2.122e-9■□□□□ 10.1
EXOSC3-201ENST00000327304 PTPRKQ15262 1439 aa28.27■■■□□ 2.12
EXOSC3-201ENST00000327304 CFAP74Q9C0B2 1584 aa28.27■■■□□ 2.12
EXOSC3-201ENST00000327304 ARHGEF12Q9NZN5 1544 aa28.26■■■□□ 2.12
EXOSC3-201ENST00000327304 MBD5Q9P267 1494 aa28.26■■■□□ 2.11
EXOSC3-201ENST00000327304 ABCC5O15440 1437 aa28.25■■■□□ 2.11
EXOSC3-201ENST00000327304 DAPK1P53355 1430 aa28.25■■■□□ 2.11
EXOSC3-201ENST00000327304 KIAA1107Q9UPP5 1409 aa28.25■■■□□ 2.11
EXOSC3-201ENST00000327304 AKNAQ7Z591 1439 aa28.25■■■□□ 2.11
EXOSC3-201ENST00000327304 ARHGEF5Q12774 1597 aa28.24■■■□□ 2.11
EXOSC3-201ENST00000327304 NEO1Q92859 1461 aa28.23■■■□□ 2.11
EXOSC3-201ENST00000327304 ADGRL1O94910 1474 aa28.23■■■□□ 2.11
EXOSC3-201ENST00000327304 TRHP20396 242 aaPredicted RBP28.2■■■□□ 2.11
EXOSC3-201ENST00000327304 CROCC2H7BZ55 1655 aa28.2■■■□□ 2.1
EXOSC3-201ENST00000327304 CCDC141Q6ZP82 1450 aa28.19■■■□□ 2.1
EXOSC3-201ENST00000327304 SCAPERQ9BY12 1400 aa28.19■■■□□ 2.1
EXOSC3-201ENST00000327304 TEX14Q8IWB6 1497 aa28.18■■■□□ 2.1
EXOSC3-201ENST00000327304 TRAPPC8Q9Y2L5 1435 aa28.17■■■□□ 2.1
EXOSC3-201ENST00000327304 ZEB1P37275 1124 aaPredicted RBP28.15■■■□□ 2.1
EXOSC3-201ENST00000327304 CHIC2Q9UKJ5 165 aa28.15■■■□□ 2.1
EXOSC3-201ENST00000327304 SHANK2Q9UPX8 1470 aa28.13■■■□□ 2.09
EXOSC3-201ENST00000327304 RSPH4AQ5TD94 716 aa28.13■■■□□ 2.09
EXOSC3-201ENST00000327304 C9orf84Q5VXU9 1444 aa28.11■■■□□ 2.09
EXOSC3-201ENST00000327304 AFAP1Q8N556 730 aa28.09■■■□□ 2.09
EXOSC3-201ENST00000327304 POGZQ7Z3K3 1410 aa28.09■■■□□ 2.09
EXOSC3-201ENST00000327304 TSPY4P0CV99 314 aa28.08■■■□□ 2.09
EXOSC3-201ENST00000327304 TSPY10P0CW01 314 aa28.08■■■□□ 2.09
EXOSC3-201ENST00000327304 ADGBQ8N7X0 1667 aa28.07■■■□□ 2.08
EXOSC3-201ENST00000327304 DENND4BO75064 1496 aaPredicted RBP28.06■■■□□ 2.08
EXOSC3-201ENST00000327304 MAST1Q9Y2H9 1570 aa28.06■■■□□ 2.08
EXOSC3-201ENST00000327304 ADGRL2O95490 1459 aa28.05■■■□□ 2.08
EXOSC3-201ENST00000327304 ZNF518AQ6AHZ1 1483 aa28.05■■■□□ 2.08
EXOSC3-201ENST00000327304 ROCK1Q13464 1354 aa28.05■■■□□ 2.08
EXOSC3-201ENST00000327304 RRP7BPQ9NSQ0 103 aa28.04■■■□□ 2.08
EXOSC3-201ENST00000327304 RICTORQ6R327 1708 aa28.02■■■□□ 2.08
EXOSC3-201ENST00000327304 HFM1A2PYH4 1435 aa28.02■■■□□ 2.08
EXOSC3-201ENST00000327304 NCOA1Q15788 1441 aa28.02■■■□□ 2.08
EXOSC3-201ENST00000327304 RAPGEF3O95398 923 aa28.02■■■□□ 2.08
EXOSC3-201ENST00000327304 KDM5CP41229 1560 aa28.01■■■□□ 2.07
EXOSC3-201ENST00000327304 SPAG9O60271 1321 aaKnown RBP28.01■■■□□ 2.07
EXOSC3-201ENST00000327304 NAIPQ13075 1403 aa28■■■□□ 2.07
EXOSC3-201ENST00000327304 FRMPD1Q5SYB0 1578 aa28■■■□□ 2.07
EXOSC3-201ENST00000327304 ANKRD30AQ9BXX3 1397 aa28■■■□□ 2.07
EXOSC3-201ENST00000327304 ZFYVE16Q7Z3T8 1539 aa28■■■□□ 2.07
EXOSC3-201ENST00000327304 INO80Q9ULG1 1556 aaPredicted RBP27.99■■■□□ 2.07
EXOSC3-201ENST00000327304 SETD5Q9C0A6 1442 aa27.98■■■□□ 2.07
EXOSC3-201ENST00000327304 COL17A1Q9UMD9 1497 aaPredicted RBP27.98■■■□□ 2.07
EXOSC3-201ENST00000327304 GCC2Q8IWJ2 1684 aa27.98■■■□□ 2.07
EXOSC3-201ENST00000327304 ATP7AQ04656 1500 aa27.97■■■□□ 2.07
EXOSC3-201ENST00000327304 RTEL1-TNFRSF6BF6WH68 1400 aa27.96■■■□□ 2.07
EXOSC3-201ENST00000327304 PLXNC1O60486 1568 aa27.95■■■□□ 2.06
EXOSC3-201ENST00000327304 CCER1Q8TC90 406 aaPredicted RBP27.94■■■□□ 2.06
EXOSC3-201ENST00000327304 RAB3GAP2Q9H2M9 1393 aa27.93■■■□□ 2.06
EXOSC3-201ENST00000327304 KIF15Q9NS87 1388 aa27.93■■■□□ 2.06
EXOSC3-201ENST00000327304 HECW2Q9P2P5 1572 aa27.93■■■□□ 2.06
EXOSC3-201ENST00000327304 KIDINS220Q9ULH0 1771 aa27.93■■■□□ 2.06
EXOSC3-201ENST00000327304 MLH3Q9UHC1 1453 aa27.92■■■□□ 2.06
EXOSC3-201ENST00000327304 KDM6BO15054 1643 aa27.91■■■□□ 2.06
EXOSC3-201ENST00000327304 ZMYM4Q5VZL5 1548 aa27.9■■■□□ 2.06
EXOSC3-201ENST00000327304 MYT1LQ9UL68 1186 aa27.9■■■□□ 2.06
EXOSC3-201ENST00000327304 ANKRD50Q9ULJ7 1429 aa27.84■■■□□ 2.05
EXOSC3-201ENST00000327304 ABCA6Q8N139 1617 aa27.84■■■□□ 2.05
EXOSC3-201ENST00000327304 DUOX2Q9NRD8 1548 aa27.83■■■□□ 2.05
EXOSC3-201ENST00000327304 YEATS2Q9ULM3 1422 aa27.82■■■□□ 2.04
EXOSC3-201ENST00000327304 DIP2CQ9Y2E4 1556 aa27.8■■■□□ 2.04
EXOSC3-201ENST00000327304 MAGI2Q86UL8 1455 aa27.79■■■□□ 2.04
EXOSC3-201ENST00000327304 ERBINQ96RT1 1412 aa27.76■■■□□ 2.03
EXOSC3-201ENST00000327304 A2MP01023 1474 aa27.75■■■□□ 2.03
EXOSC3-201ENST00000327304 DHX29Q7Z478 1369 aaKnown RBP27.75■■■□□ 2.03
EXOSC3-201ENST00000327304 ARHGEF40Q8TER5 1519 aa27.72■■■□□ 2.03
EXOSC3-201ENST00000327304 ATP10AO60312 1499 aa27.68■■■□□ 2.02
EXOSC3-201ENST00000327304 TRIM52Q96A61 297 aa27.67■■■□□ 2.02
EXOSC3-201ENST00000327304 EIF2AK4Q9P2K8 1649 aaKnown RBP27.67■■■□□ 2.02
EXOSC3-201ENST00000327304 UNC13BO14795 1591 aa27.64■■■□□ 2.02
EXOSC3-201ENST00000327304 DHX57Q6P158 1386 aaKnown RBP27.64■■■□□ 2.02
EXOSC3-201ENST00000327304 KIF3BO15066 747 aa27.62■■■□□ 2.01
EXOSC3-201ENST00000327304 REREQ9P2R6 1566 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms