RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 PBRM1Q86U86 1689 aa14.87□□□□□ -0.03
CUL4A-201ENST00000326335 PTPN23Q9H3S7 1636 aa14.87□□□□□ -0.03
CUL4A-201ENST00000326335 C11orf95C9JLR9 678 aaPredicted RBP14.87□□□□□ -0.03
CUL4A-201ENST00000326335 SALL2Q9Y467 1007 aaPredicted RBP14.87□□□□□ -0.03
CUL4A-201ENST00000326335 CCDC184Q52MB2 194 aa14.86□□□□□ -0.03
CUL4A-201ENST00000326335 ADAMTS12P58397 1594 aa14.86□□□□□ -0.03
CUL4A-201ENST00000326335 SUPT6HQ7KZ85 1726 aaKnown RBP14.86□□□□□ -0.03
CUL4A-201ENST00000326335 KDM6BO15054 1643 aa14.85□□□□□ -0.03
CUL4A-201ENST00000326335 EHBP1L1Q8N3D4 1523 aa14.84□□□□□ -0.03
CUL4A-201ENST00000326335 SAMD9Q5K651 1589 aa14.84□□□□□ -0.03
CUL4A-201ENST00000326335 EIF4G3O43432 1585 aaKnown RBP14.84□□□□□ -0.03
CUL4A-201ENST00000326335 KIAA0586Q9BVV6 1533 aa14.84□□□□□ -0.03
CUL4A-201ENST00000326335 NUP153P49790 1475 aaKnown RBP14.83□□□□□ -0.04
CUL4A-201ENST00000326335 DISP1Q96F81 1524 aa14.83□□□□□ -0.04
CUL4A-201ENST00000326335 WASHC2AQ641Q2 1341 aa14.82□□□□□ -0.04
CUL4A-201ENST00000326335 DCAF11Q8TEB1 546 aa14.82□□□□□ -0.04
CUL4A-201ENST00000326335 CARMIL2Q6F5E8 1435 aa14.82□□□□□ -0.04
CUL4A-201ENST00000326335 NEFLP07196 543 aa14.81□□□□□ -0.04
CUL4A-201ENST00000326335 NUP155O75694 1391 aa14.81□□□□□ -0.04
CUL4A-201ENST00000326335 HECW1Q76N89 1606 aa14.81□□□□□ -0.04
CUL4A-201ENST00000326335 UGGT2Q9NYU1 1516 aa14.8□□□□□ -0.04
CUL4A-201ENST00000326335 MRS2Q9HD23 443 aa14.79□□□□□ -0.04
CUL4A-201ENST00000326335 PTPRGP23470 1445 aa14.79□□□□□ -0.04
CUL4A-201ENST00000326335 ABCC5O15440 1437 aa14.79□□□□□ -0.04
CUL4A-201ENST00000326335 ARHGEF11O15085 1522 aa14.78□□□□□ -0.04
CUL4A-201ENST00000326335 DAPK1P53355 1430 aa14.78□□□□□ -0.04
CUL4A-201ENST00000326335 WDR62O43379 1518 aa14.76□□□□□ -0.05
CUL4A-201ENST00000326335 SYNJ2O15056 1496 aa14.75□□□□□ -0.05
CUL4A-201ENST00000326335 TIMELESSQ9UNS1 1208 aa14.75□□□□□ -0.05
CUL4A-201ENST00000326335 CARD11Q9BXL7 1154 aa14.74□□□□□ -0.05
CUL4A-201ENST00000326335 CEP170Q5SW79 1584 aa14.74□□□□□ -0.05
CUL4A-201ENST00000326335 KIAA0556O60303 1618 aa14.73□□□□□ -0.05
CUL4A-201ENST00000326335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.72□□□□□ -0.051e-9■■■■■ 38.9
CUL4A-201ENST00000326335 TROQ12816 1431 aaPredicted RBP14.72□□□□□ -0.05
CUL4A-201ENST00000326335 KIF14Q15058 1648 aa14.7□□□□□ -0.06
CUL4A-201ENST00000326335 CAMSAP2Q08AD1 1489 aa14.69□□□□□ -0.06
CUL4A-201ENST00000326335 ANKRD30AQ9BXX3 1397 aa14.69□□□□□ -0.06
CUL4A-201ENST00000326335 CHGAP10645 457 aaKnown RBP14.68□□□□□ -0.06
CUL4A-201ENST00000326335 AFAP1Q8N556 730 aa14.68□□□□□ -0.06
CUL4A-201ENST00000326335 RAPGEF6Q8TEU7 1601 aa14.68□□□□□ -0.06
CUL4A-201ENST00000326335 GPATCH8Q9UKJ3 1502 aaKnown RBP14.68□□□□□ -0.06
CUL4A-201ENST00000326335 DENND4BO75064 1496 aaPredicted RBP14.68□□□□□ -0.06
CUL4A-201ENST00000326335 ST20-MTHFSA0A0A6YYL1 179 aa14.67□□□□□ -0.06
CUL4A-201ENST00000326335 KIF7Q2M1P5 1343 aa14.67□□□□□ -0.06
CUL4A-201ENST00000326335 MIA2Q96PC5 1412 aa14.67□□□□□ -0.06
CUL4A-201ENST00000326335 ANKRD50Q9ULJ7 1429 aa14.67□□□□□ -0.06
CUL4A-201ENST00000326335 ATP10BO94823 1461 aa14.67□□□□□ -0.06
CUL4A-201ENST00000326335 MAGI1Q96QZ7 1491 aaPredicted RBP14.66□□□□□ -0.06
CUL4A-201ENST00000326335 KIF15Q9NS87 1388 aa14.66□□□□□ -0.06
CUL4A-201ENST00000326335 ANKRD30BQ9BXX2 1392 aa14.65□□□□□ -0.06
CUL4A-201ENST00000326335 NCOA1Q15788 1441 aa14.65□□□□□ -0.07
CUL4A-201ENST00000326335 NBPF1Q3BBV0 1214 aa14.64□□□□□ -0.07
CUL4A-201ENST00000326335 PELP1Q8IZL8 1130 aaKnown RBP14.63□□□□□ -0.07
CUL4A-201ENST00000326335 PRKRIP1Q9H875 184 aaPredicted RBP14.62□□□□□ -0.07
CUL4A-201ENST00000326335 C9orf84Q5VXU9 1444 aa14.61□□□□□ -0.07
CUL4A-201ENST00000326335 CC2D1BQ5T0F9 858 aaKnown RBP14.61□□□□□ -0.07
CUL4A-201ENST00000326335 NUTM2DQ5VT03 806 aaPredicted RBP14.6□□□□□ -0.07
CUL4A-201ENST00000326335 CCER2I3L3R5 266 aa14.59□□□□□ -0.07
CUL4A-201ENST00000326335 USP47Q96K76 1375 aa14.59□□□□□ -0.07
CUL4A-201ENST00000326335 CCDC7Q96M83 1385 aa14.59□□□□□ -0.07
CUL4A-201ENST00000326335 AKNAQ7Z591 1439 aa14.59□□□□□ -0.07
CUL4A-201ENST00000326335 TCOF1Q13428 1488 aaKnown RBP14.59□□□□□ -0.07
CUL4A-201ENST00000326335 TMC1Q8TDI8 760 aa14.59□□□□□ -0.07
CUL4A-201ENST00000326335 ERCC6L2Q5T890 1561 aa14.59□□□□□ -0.07
CUL4A-201ENST00000326335 NUP160Q12769 1436 aa14.56□□□□□ -0.08
CUL4A-201ENST00000326335 ARHGAP5Q13017 1502 aa14.55□□□□□ -0.08
CUL4A-201ENST00000326335 KIF3BO15066 747 aa14.55□□□□□ -0.08
CUL4A-201ENST00000326335 B4GALNT3Q6L9W6 998 aa14.55□□□□□ -0.08
CUL4A-201ENST00000326335 ROCK2O75116 1388 aaKnown RBP14.55□□□□□ -0.08
CUL4A-201ENST00000326335 GGT6Q6P531 493 aa14.54□□□□□ -0.08
CUL4A-201ENST00000326335 TSHZ2Q9NRE2 1034 aa14.53□□□□□ -0.08
CUL4A-201ENST00000326335 PZPP20742 1482 aa14.53□□□□□ -0.08
CUL4A-201ENST00000326335 EFCAB2Q5VUJ9 269 aa14.52□□□□□ -0.08
CUL4A-201ENST00000326335 KIAA1107Q9UPP5 1409 aa14.52□□□□□ -0.08
CUL4A-201ENST00000326335 RPRD2Q5VT52 1461 aaKnown RBP14.52□□□□□ -0.08
CUL4A-201ENST00000326335 ROCK1Q13464 1354 aa14.52□□□□□ -0.08
CUL4A-201ENST00000326335 PLPPR3Q6T4P5 718 aa14.51□□□□□ -0.09
CUL4A-201ENST00000326335 SPAG9O60271 1321 aaKnown RBP14.5□□□□□ -0.09
CUL4A-201ENST00000326335 KDM5BQ9UGL1 1544 aa14.5□□□□□ -0.09
CUL4A-201ENST00000326335 DNMT1P26358 1616 aaKnown RBP14.49□□□□□ -0.09
CUL4A-201ENST00000326335 NPM1P06748 294 aaKnown RBP eCLIP14.49□□□□□ -0.09
CUL4A-201ENST00000326335 CNTLNQ9NXG0 1405 aa14.49□□□□□ -0.09
CUL4A-201ENST00000326335 PLEKHH2Q8IVE3 1493 aa14.48□□□□□ -0.09
CUL4A-201ENST00000326335 SAFB2Q14151 953 aaKnown RBP eCLIP14.48□□□□□ -0.09
CUL4A-201ENST00000326335 TNNT2P45379 298 aaPredicted RBP14.47□□□□□ -0.09
CUL4A-201ENST00000326335 CCDC144AA2RUR9 1427 aa14.47□□□□□ -0.09
CUL4A-201ENST00000326335 SYCP2Q9BX26 1530 aa14.46□□□□□ -0.09
CUL4A-201ENST00000326335 GCC2Q8IWJ2 1684 aa14.45□□□□□ -0.1
CUL4A-201ENST00000326335 TEX14Q8IWB6 1497 aa14.44□□□□□ -0.1
CUL4A-201ENST00000326335 CYB5RLQ6IPT4 315 aa14.44□□□□□ -0.1
CUL4A-201ENST00000326335 CHD1O14646 1710 aa14.43□□□□□ -0.1
CUL4A-201ENST00000326335 PANK3Q9H999 370 aa14.42□□□□□ -0.1
CUL4A-201ENST00000326335 SCAPERQ9BY12 1400 aa14.41□□□□□ -0.1
CUL4A-201ENST00000326335 RAPGEF3O95398 923 aa14.41□□□□□ -0.1
CUL4A-201ENST00000326335 TRAPPC8Q9Y2L5 1435 aa14.41□□□□□ -0.1
CUL4A-201ENST00000326335 ABCC10Q5T3U5 1492 aa14.41□□□□□ -0.1
CUL4A-201ENST00000326335 CCDC141Q6ZP82 1450 aa14.4□□□□□ -0.1
CUL4A-201ENST00000326335 ABCA8O94911 1581 aa14.39□□□□□ -0.11
CUL4A-201ENST00000326335 MLECQ14165 292 aa14.39□□□□□ -0.11
CUL4A-201ENST00000326335 CDC42BPAQ5VT25 1732 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms