RNA–Protein interactions for RNA: ENST00000326197.11

SCMH1-201, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCMH1, Length 3,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-201ENST00000326197 SNAPC4Q5SXM2 1469 aa13.59□□□□□ -0.23
SCMH1-201ENST00000326197 LAS1LQ9Y4W2 734 aaKnown RBP13.58□□□□□ -0.24
SCMH1-201ENST00000326197 ERCC6Q03468 1493 aa13.58□□□□□ -0.24
SCMH1-201ENST00000326197 ABCA10Q8WWZ4 1543 aa13.58□□□□□ -0.24
SCMH1-201ENST00000326197 KDM2AQ9Y2K7 1162 aa13.58□□□□□ -0.24
SCMH1-201ENST00000326197 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
SCMH1-201ENST00000326197 EHBP1L1Q8N3D4 1523 aa13.57□□□□□ -0.24
SCMH1-201ENST00000326197 RTN4Q9NQC3 1192 aaKnown RBP13.55□□□□□ -0.24
SCMH1-201ENST00000326197 PRDM2Q13029 1718 aa13.55□□□□□ -0.24
SCMH1-201ENST00000326197 KDM5BQ9UGL1 1544 aa13.54□□□□□ -0.24
SCMH1-201ENST00000326197 ZNF644Q9H582 1327 aaPredicted RBP13.54□□□□□ -0.24
SCMH1-201ENST00000326197 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
SCMH1-201ENST00000326197 SMG6Q86US8 1419 aaKnown RBP13.54□□□□□ -0.24
SCMH1-201ENST00000326197 CARD11Q9BXL7 1154 aa13.53□□□□□ -0.24
SCMH1-201ENST00000326197 CTTNBP2Q8WZ74 1663 aa13.53□□□□□ -0.24
SCMH1-201ENST00000326197 CUL7Q14999 1698 aa13.53□□□□□ -0.24
SCMH1-201ENST00000326197 GRIN2BQ13224 1484 aa13.52□□□□□ -0.24
SCMH1-201ENST00000326197 DAXXQ9UER7 740 aaPredicted RBP13.52□□□□□ -0.24
SCMH1-201ENST00000326197 USP47Q96K76 1375 aa13.52□□□□□ -0.25
SCMH1-201ENST00000326197 NEFMP07197 916 aa13.52□□□□□ -0.25
SCMH1-201ENST00000326197 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
SCMH1-201ENST00000326197 PKD2Q13563 968 aa13.51□□□□□ -0.25
SCMH1-201ENST00000326197 ANKRD30BQ9BXX2 1392 aa13.51□□□□□ -0.25
SCMH1-201ENST00000326197 EXOC6Q8TAG9 804 aa13.51□□□□□ -0.25
SCMH1-201ENST00000326197 UGGT2Q9NYU1 1516 aa13.5□□□□□ -0.25
SCMH1-201ENST00000326197 CFDP1Q9UEE9 299 aaPredicted RBP13.49□□□□□ -0.25
SCMH1-201ENST00000326197 KDM6BO15054 1643 aa13.49□□□□□ -0.25
SCMH1-201ENST00000326197 RCAN3Q9UKA8 241 aa13.48□□□□□ -0.25
SCMH1-201ENST00000326197 PNISRQ8TF01 805 aaKnown RBP13.48□□□□□ -0.25
SCMH1-201ENST00000326197 CDK13Q14004 1512 aaKnown RBP13.48□□□□□ -0.25
SCMH1-201ENST00000326197 RPRD2Q5VT52 1461 aaKnown RBP13.47□□□□□ -0.25
SCMH1-201ENST00000326197 RRP1P56182 461 aaKnown RBP13.47□□□□□ -0.25
SCMH1-201ENST00000326197 HECW1Q76N89 1606 aa13.46□□□□□ -0.25
SCMH1-201ENST00000326197 DENND4BO75064 1496 aaPredicted RBP13.46□□□□□ -0.25
SCMH1-201ENST00000326197 MAGI3Q5TCQ9 1506 aa13.46□□□□□ -0.26
SCMH1-201ENST00000326197 TCERG1O14776 1098 aaKnown RBP13.45□□□□□ -0.26
SCMH1-201ENST00000326197 PDE4AP27815 886 aa13.45□□□□□ -0.26
SCMH1-201ENST00000326197 MIA2Q96PC5 1412 aa13.45□□□□□ -0.26
SCMH1-201ENST00000326197 EPRSP07814 1512 aaKnown RBP13.44□□□□□ -0.26
SCMH1-201ENST00000326197 ST20-MTHFSA0A0A6YYL1 179 aa13.44□□□□□ -0.26
SCMH1-201ENST00000326197 DCAF11Q8TEB1 546 aa13.44□□□□□ -0.26
SCMH1-201ENST00000326197 DAPK1P53355 1430 aa13.43□□□□□ -0.26
SCMH1-201ENST00000326197 IL27Q8NEV9 243 aa13.43□□□□□ -0.26
SCMH1-201ENST00000326197 TCOF1Q13428 1488 aaKnown RBP13.42□□□□□ -0.26
SCMH1-201ENST00000326197 PLIN1O60240 522 aa13.42□□□□□ -0.26
SCMH1-201ENST00000326197 KIF15Q9NS87 1388 aa13.42□□□□□ -0.26
SCMH1-201ENST00000326197 DHX29Q7Z478 1369 aaKnown RBP13.41□□□□□ -0.26
SCMH1-201ENST00000326197 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
SCMH1-201ENST00000326197 GCC2Q8IWJ2 1684 aa13.41□□□□□ -0.26
SCMH1-201ENST00000326197 MYBBP1AQ9BQG0 1328 aaKnown RBP13.41□□□□□ -0.26
SCMH1-201ENST00000326197 SAMD9Q5K651 1589 aa13.41□□□□□ -0.26
SCMH1-201ENST00000326197 PPM1GO15355 546 aaPredicted RBP13.4□□□□□ -0.26
SCMH1-201ENST00000326197 ANO8Q9HCE9 1232 aaPredicted RBP13.4□□□□□ -0.26
SCMH1-201ENST00000326197 TEX14Q8IWB6 1497 aa13.4□□□□□ -0.26
SCMH1-201ENST00000326197 LRRIQ1Q96JM4 1722 aa13.4□□□□□ -0.26
SCMH1-201ENST00000326197 SPATA31E1Q6ZUB1 1445 aa13.4□□□□□ -0.26
SCMH1-201ENST00000326197 RALBP1Q15311 655 aa13.4□□□□□ -0.26
SCMH1-201ENST00000326197 RGL3Q3MIN7 710 aa13.4□□□□□ -0.26
SCMH1-201ENST00000326197 CC2D1BQ5T0F9 858 aaKnown RBP13.4□□□□□ -0.26
SCMH1-201ENST00000326197 ABCC5O15440 1437 aa13.4□□□□□ -0.26
SCMH1-201ENST00000326197 ROCK2O75116 1388 aaKnown RBP13.4□□□□□ -0.26
SCMH1-201ENST00000326197 RNF123Q5XPI4 1314 aa13.39□□□□□ -0.27
SCMH1-201ENST00000326197 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
SCMH1-201ENST00000326197 FBLN2P98095 1184 aa13.38□□□□□ -0.27
SCMH1-201ENST00000326197 NUP155O75694 1391 aa13.38□□□□□ -0.27
SCMH1-201ENST00000326197 CDCA7LQ96GN5 454 aa13.38□□□□□ -0.27
SCMH1-201ENST00000326197 SKAP1Q86WV1 359 aa13.38□□□□□ -0.27
SCMH1-201ENST00000326197 ROCK1Q13464 1354 aa13.38□□□□□ -0.27
SCMH1-201ENST00000326197 NLRP13Q86W25 1043 aa13.37□□□□□ -0.27
SCMH1-201ENST00000326197 TSPY4P0CV99 314 aa13.37□□□□□ -0.27
SCMH1-201ENST00000326197 TSPY10P0CW01 314 aa13.37□□□□□ -0.27
SCMH1-201ENST00000326197 DDRGK1Q96HY6 314 aa13.36□□□□□ -0.27
SCMH1-201ENST00000326197 KTN1Q86UP2 1357 aaKnown RBP13.36□□□□□ -0.27
SCMH1-201ENST00000326197 ARID4BQ4LE39 1312 aaPredicted RBP13.36□□□□□ -0.27
SCMH1-201ENST00000326197 SLC4A3P48751 1232 aa13.35□□□□□ -0.27
SCMH1-201ENST00000326197 BACH2Q9BYV9 841 aa13.35□□□□□ -0.27
SCMH1-201ENST00000326197 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.35□□□□□ -0.27
SCMH1-201ENST00000326197 ARHGEF11O15085 1522 aa13.35□□□□□ -0.27
SCMH1-201ENST00000326197 KIAA1107Q9UPP5 1409 aa13.35□□□□□ -0.27
SCMH1-201ENST00000326197 BRD4O60885 1362 aaPredicted RBP13.35□□□□□ -0.27
SCMH1-201ENST00000326197 CRBNQ96SW2 442 aa13.34□□□□□ -0.27
SCMH1-201ENST00000326197 PDS5BQ9NTI5 1447 aa13.34□□□□□ -0.27
SCMH1-201ENST00000326197 ANKRD30AQ9BXX3 1397 aa13.34□□□□□ -0.27
SCMH1-201ENST00000326197 MS4A1P11836 297 aa13.33□□□□□ -0.28
SCMH1-201ENST00000326197 PDE3BQ13370 1112 aa13.33□□□□□ -0.28
SCMH1-201ENST00000326197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.283e-7■□□□□ 11
SCMH1-201ENST00000326197 USP35Q9P2H5 1018 aa13.33□□□□□ -0.28
SCMH1-201ENST00000326197 LAMC3Q9Y6N6 1575 aa13.32□□□□□ -0.28
SCMH1-201ENST00000326197 IQGAP2Q13576 1575 aa13.31□□□□□ -0.28
SCMH1-201ENST00000326197 RGS3P49796 1198 aa13.31□□□□□ -0.28
SCMH1-201ENST00000326197 EIF5BO60841 1220 aaKnown RBP13.3□□□□□ -0.28
SCMH1-201ENST00000326197 PRG4Q92954 1404 aaPredicted RBP13.3□□□□□ -0.28
SCMH1-201ENST00000326197 ANKRD50Q9ULJ7 1429 aa13.29□□□□□ -0.28
SCMH1-201ENST00000326197 PZPP20742 1482 aa13.29□□□□□ -0.28
SCMH1-201ENST00000326197 PLEKHD1A6NEE1 506 aa13.28□□□□□ -0.28
SCMH1-201ENST00000326197 PRKCSHP14314 528 aaPredicted RBP13.28□□□□□ -0.28
SCMH1-201ENST00000326197 WDR43Q15061 677 aaKnown RBP eCLIP13.28□□□□□ -0.28
SCMH1-201ENST00000326197 ABCA5Q8WWZ7 1642 aa13.28□□□□□ -0.28
SCMH1-201ENST00000326197 BCORL1Q5H9F3 1711 aa13.27□□□□□ -0.28
SCMH1-201ENST00000326197 WDR62O43379 1518 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms