RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 CDCA8Q53HL2 280 aa20.16■□□□□ 0.82
GCFC2-201ENST00000321027 DDRGK1Q96HY6 314 aa20.14■□□□□ 0.81
GCFC2-201ENST00000321027 LRRC9Q6ZRR7 1453 aa20.13■□□□□ 0.81
GCFC2-201ENST00000321027 TOPBP1Q92547 1522 aa20.13■□□□□ 0.81
GCFC2-201ENST00000321027 POLA1P09884 1462 aaPredicted RBP20.13■□□□□ 0.81
GCFC2-201ENST00000321027 ERICH6BQ5W0A0 696 aa20.12■□□□□ 0.81
GCFC2-201ENST00000321027 DEKP35659 375 aaKnown RBP20.12■□□□□ 0.81
GCFC2-201ENST00000321027 RTN4Q9NQC3 1192 aaKnown RBP20.12■□□□□ 0.81
GCFC2-201ENST00000321027 TNNT2P45379 298 aaPredicted RBP20.12■□□□□ 0.81
GCFC2-201ENST00000321027 GGT6Q6P531 493 aa20.12■□□□□ 0.81
GCFC2-201ENST00000321027 PRKRIP1Q9H875 184 aaPredicted RBP20.11■□□□□ 0.81
GCFC2-201ENST00000321027 PTPRGP23470 1445 aa20.11■□□□□ 0.81
GCFC2-201ENST00000321027 FGD6Q6ZV73 1430 aa20.1■□□□□ 0.81
GCFC2-201ENST00000321027 ZNF644Q9H582 1327 aaPredicted RBP20.09■□□□□ 0.81
GCFC2-201ENST00000321027 ARID4BQ4LE39 1312 aaPredicted RBP20.09■□□□□ 0.81
GCFC2-201ENST00000321027 KANK1Q14678 1352 aa20.08■□□□□ 0.81
GCFC2-201ENST00000321027 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
GCFC2-201ENST00000321027 FRAT1Q92837 279 aaPredicted RBP20.07■□□□□ 0.8
GCFC2-201ENST00000321027 TMF1P82094 1093 aa20.07■□□□□ 0.8
GCFC2-201ENST00000321027 CASKIN1Q8WXD9 1431 aa20.07■□□□□ 0.8
GCFC2-201ENST00000321027 NUDCQ9Y266 331 aa20.06■□□□□ 0.8
GCFC2-201ENST00000321027 RCAN3Q9UKA8 241 aa20.06■□□□□ 0.8
GCFC2-201ENST00000321027 PPM1GO15355 546 aaPredicted RBP20.06■□□□□ 0.8
GCFC2-201ENST00000321027 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
GCFC2-201ENST00000321027 RSPH4AQ5TD94 716 aa20.04■□□□□ 0.8
GCFC2-201ENST00000321027 MYOM3Q5VTT5 1437 aa20.04■□□□□ 0.8
GCFC2-201ENST00000321027 KIF3BO15066 747 aa20.03■□□□□ 0.8
GCFC2-201ENST00000321027 GRIN2BQ13224 1484 aa20.02■□□□□ 0.8
GCFC2-201ENST00000321027 RRBP1Q9P2E9 1410 aaKnown RBP20.01■□□□□ 0.79
GCFC2-201ENST00000321027 PLEKHG5O94827 1062 aa20.01■□□□□ 0.79
GCFC2-201ENST00000321027 SPAG9O60271 1321 aaKnown RBP20.01■□□□□ 0.79
GCFC2-201ENST00000321027 MLECQ14165 292 aa20■□□□□ 0.79
GCFC2-201ENST00000321027 BECN1Q14457 450 aa20■□□□□ 0.79
GCFC2-201ENST00000321027 ROCK2O75116 1388 aaKnown RBP19.99■□□□□ 0.79
GCFC2-201ENST00000321027 ST20-MTHFSA0A0A6YYL1 179 aa19.99■□□□□ 0.79
GCFC2-201ENST00000321027 KTN1Q86UP2 1357 aaKnown RBP19.99■□□□□ 0.79
GCFC2-201ENST00000321027 POGKQ9P215 609 aa19.98■□□□□ 0.79
GCFC2-201ENST00000321027 MYH16Q9H6N6 1097 aa19.98■□□□□ 0.79
GCFC2-201ENST00000321027 NCOA2Q15596 1464 aa19.98■□□□□ 0.79
GCFC2-201ENST00000321027 RALBP1Q15311 655 aa19.96■□□□□ 0.79
GCFC2-201ENST00000321027 CFAP53Q96M91 514 aa19.96■□□□□ 0.79
GCFC2-201ENST00000321027 FYCO1Q9BQS8 1478 aa19.95■□□□□ 0.78
GCFC2-201ENST00000321027 DNMBPQ6XZF7 1577 aa19.94■□□□□ 0.78
GCFC2-201ENST00000321027 SAFB2Q14151 953 aaKnown RBP eCLIP19.94■□□□□ 0.78
GCFC2-201ENST00000321027 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
GCFC2-201ENST00000321027 WASHC2AQ641Q2 1341 aa19.93■□□□□ 0.78
GCFC2-201ENST00000321027 FTSJ3Q8IY81 847 aaKnown RBP19.93■□□□□ 0.78
GCFC2-201ENST00000321027 ZBED9Q6R2W3 1325 aa19.93■□□□□ 0.78
GCFC2-201ENST00000321027 GLIPR1L2Q4G1C9 344 aa19.91■□□□□ 0.78
GCFC2-201ENST00000321027 NLRP13Q86W25 1043 aa19.91■□□□□ 0.78
GCFC2-201ENST00000321027 IPO9Q96P70 1041 aaKnown RBP19.9■□□□□ 0.78
GCFC2-201ENST00000321027 UACAQ9BZF9 1416 aa19.89■□□□□ 0.78
GCFC2-201ENST00000321027 TCERG1O14776 1098 aaKnown RBP19.89■□□□□ 0.77
GCFC2-201ENST00000321027 ABCA10Q8WWZ4 1543 aa19.88■□□□□ 0.77
GCFC2-201ENST00000321027 KIF7Q2M1P5 1343 aa19.87■□□□□ 0.77
GCFC2-201ENST00000321027 EFCAB5A4FU69 1503 aa19.86■□□□□ 0.77
GCFC2-201ENST00000321027 ZBTB7CA1YPR0 619 aa19.86■□□□□ 0.77
GCFC2-201ENST00000321027 U2SURPO15042 1029 aaKnown RBP19.86■□□□□ 0.77
GCFC2-201ENST00000321027 PLIN1O60240 522 aa19.86■□□□□ 0.77
GCFC2-201ENST00000321027 STK26Q9P289 416 aa19.86■□□□□ 0.77
GCFC2-201ENST00000321027 USP47Q96K76 1375 aa19.86■□□□□ 0.77
GCFC2-201ENST00000321027 C14orf37Q86TY3 774 aa19.86■□□□□ 0.77
GCFC2-201ENST00000321027 PRDM2Q13029 1718 aa19.86■□□□□ 0.77
GCFC2-201ENST00000321027 IFT140Q96RY7 1462 aa19.85■□□□□ 0.77
GCFC2-201ENST00000321027 EXOC6Q8TAG9 804 aa19.85■□□□□ 0.77
GCFC2-201ENST00000321027 CCDC7Q96M83 1385 aa19.84■□□□□ 0.77
GCFC2-201ENST00000321027 SRPK2P78362 688 aaKnown RBP19.84■□□□□ 0.77
GCFC2-201ENST00000321027 TIAM1Q13009 1591 aa19.84■□□□□ 0.77
GCFC2-201ENST00000321027 CCDC144AA2RUR9 1427 aa19.83■□□□□ 0.77
GCFC2-201ENST00000321027 TRIM44Q96DX7 344 aaPredicted RBP19.83■□□□□ 0.76
GCFC2-201ENST00000321027 MAPK8IP3Q9UPT6 1336 aa19.81■□□□□ 0.76
GCFC2-201ENST00000321027 NCLP19338 710 aaKnown RBP19.81■□□□□ 0.76
GCFC2-201ENST00000321027 CCDC146Q8IYE0 955 aa19.81■□□□□ 0.76
GCFC2-201ENST00000321027 FANCIQ9NVI1 1328 aa19.81■□□□□ 0.76
GCFC2-201ENST00000321027 MORC1Q86VD1 984 aa19.81■□□□□ 0.76
GCFC2-201ENST00000321027 MYBBP1AQ9BQG0 1328 aaKnown RBP19.81■□□□□ 0.76
GCFC2-201ENST00000321027 A0A0G2JS52 829 aa19.8■□□□□ 0.76
GCFC2-201ENST00000321027 CCDC184Q52MB2 194 aa19.8■□□□□ 0.76
GCFC2-201ENST00000321027 WASHC2CQ9Y4E1 1318 aa19.8■□□□□ 0.76
GCFC2-201ENST00000321027 KIF15Q9NS87 1388 aa19.8■□□□□ 0.76
GCFC2-201ENST00000321027 PANK3Q9H999 370 aa19.79■□□□□ 0.76
GCFC2-201ENST00000321027 SPRYD3Q8NCJ5 442 aa19.79■□□□□ 0.76
GCFC2-201ENST00000321027 SNAPC4Q5SXM2 1469 aa19.79■□□□□ 0.76
GCFC2-201ENST00000321027 WDR97A6NE52 1622 aa19.79■□□□□ 0.76
GCFC2-201ENST00000321027 NUTM2DQ5VT03 806 aaPredicted RBP19.79■□□□□ 0.76
GCFC2-201ENST00000321027 OSCARQ8IYS5 282 aa19.78■□□□□ 0.76
GCFC2-201ENST00000321027 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.76
GCFC2-201ENST00000321027 GOLGA6L22H0YM25 854 aa19.77■□□□□ 0.76
GCFC2-201ENST00000321027 TPRNQ4KMQ1 711 aa19.77■□□□□ 0.76
GCFC2-201ENST00000321027 PDE3BQ13370 1112 aa19.77■□□□□ 0.75
GCFC2-201ENST00000321027 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
GCFC2-201ENST00000321027 ANKRD50Q9ULJ7 1429 aa19.76■□□□□ 0.75
GCFC2-201ENST00000321027 RRP1P56182 461 aaKnown RBP19.76■□□□□ 0.75
GCFC2-201ENST00000321027 GOLGA2Q08379 1002 aa19.76■□□□□ 0.75
GCFC2-201ENST00000321027 TRHP20396 242 aaPredicted RBP19.75■□□□□ 0.75
GCFC2-201ENST00000321027 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
GCFC2-201ENST00000321027 PDE4AP27815 886 aa19.75■□□□□ 0.75
GCFC2-201ENST00000321027 CNTLNQ9NXG0 1405 aa19.75■□□□□ 0.75
GCFC2-201ENST00000321027 NBPF8Q3BBV2 869 aa19.74■□□□□ 0.75
GCFC2-201ENST00000321027 SLKQ9H2G2 1235 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms