RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 ANP32AP39687 249 aaKnown RBP13.03□□□□□ -0.32
RPGR-201ENST00000318842 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
RPGR-201ENST00000318842 LRRIQ1Q96JM4 1722 aa13.03□□□□□ -0.32
RPGR-201ENST00000318842 SNAPC4Q5SXM2 1469 aa13.02□□□□□ -0.33
RPGR-201ENST00000318842 CDCA7LQ96GN5 454 aa13.02□□□□□ -0.33
RPGR-201ENST00000318842 IPO9Q96P70 1041 aaKnown RBP13.02□□□□□ -0.33
RPGR-201ENST00000318842 RTL5Q5HYW3 569 aaPredicted RBP13.01□□□□□ -0.33
RPGR-201ENST00000318842 FANCD2Q9BXW9 1451 aa13.01□□□□□ -0.33
RPGR-201ENST00000318842 TMC1Q8TDI8 760 aa13.01□□□□□ -0.33
RPGR-201ENST00000318842 CDK13Q14004 1512 aaKnown RBP13.01□□□□□ -0.33
RPGR-201ENST00000318842 NCOA1Q15788 1441 aa13□□□□□ -0.33
RPGR-201ENST00000318842 POLA1P09884 1462 aaPredicted RBP13□□□□□ -0.33
RPGR-201ENST00000318842 NUDCQ9Y266 331 aa13□□□□□ -0.33
RPGR-201ENST00000318842 NEFMP07197 916 aa12.98□□□□□ -0.33
RPGR-201ENST00000318842 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
RPGR-201ENST00000318842 BRPF3Q9ULD4 1205 aa12.95□□□□□ -0.34
RPGR-201ENST00000318842 DHX29Q7Z478 1369 aaKnown RBP12.94□□□□□ -0.34
RPGR-201ENST00000318842 CC2D1BQ5T0F9 858 aaKnown RBP12.93□□□□□ -0.34
RPGR-201ENST00000318842 PNISRQ8TF01 805 aaKnown RBP12.93□□□□□ -0.34
RPGR-201ENST00000318842 ST20-MTHFSA0A0A6YYL1 179 aa12.93□□□□□ -0.34
RPGR-201ENST00000318842 C20orf194Q5TEA3 1177 aa12.93□□□□□ -0.34
RPGR-201ENST00000318842 PKD2Q13563 968 aa12.93□□□□□ -0.34
RPGR-201ENST00000318842 USP47Q96K76 1375 aa12.92□□□□□ -0.34
RPGR-201ENST00000318842 RGL3Q3MIN7 710 aa12.92□□□□□ -0.34
RPGR-201ENST00000318842 ANKRD30BQ9BXX2 1392 aa12.92□□□□□ -0.34
RPGR-201ENST00000318842 TOPBP1Q92547 1522 aa12.91□□□□□ -0.34
RPGR-201ENST00000318842 PDE4AP27815 886 aa12.91□□□□□ -0.34
RPGR-201ENST00000318842 CARD11Q9BXL7 1154 aa12.91□□□□□ -0.34
RPGR-201ENST00000318842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.9□□□□□ -0.34
RPGR-201ENST00000318842 GRIN2BQ13224 1484 aa12.9□□□□□ -0.34
RPGR-201ENST00000318842 SMG6Q86US8 1419 aaKnown RBP12.9□□□□□ -0.34
RPGR-201ENST00000318842 PDS5BQ9NTI5 1447 aa12.89□□□□□ -0.35
RPGR-201ENST00000318842 RRP1P56182 461 aaKnown RBP12.88□□□□□ -0.35
RPGR-201ENST00000318842 ARXQ96QS3 562 aa12.88□□□□□ -0.35
RPGR-201ENST00000318842 ERICH6BQ5W0A0 696 aa12.88□□□□□ -0.35
RPGR-201ENST00000318842 BCORL1Q5H9F3 1711 aa12.88□□□□□ -0.35
RPGR-201ENST00000318842 DCAF11Q8TEB1 546 aa12.88□□□□□ -0.35
RPGR-201ENST00000318842 SPATA31E1Q6ZUB1 1445 aa12.88□□□□□ -0.35
RPGR-201ENST00000318842 TEX14Q8IWB6 1497 aa12.87□□□□□ -0.35
RPGR-201ENST00000318842 RCAN3Q9UKA8 241 aa12.87□□□□□ -0.35
RPGR-201ENST00000318842 THOC2Q8NI27 1593 aaKnown RBP12.87□□□□□ -0.35
RPGR-201ENST00000318842 EFCAB5A4FU69 1503 aa12.87□□□□□ -0.35
RPGR-201ENST00000318842 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
RPGR-201ENST00000318842 UGGT2Q9NYU1 1516 aa12.86□□□□□ -0.35
RPGR-201ENST00000318842 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
RPGR-201ENST00000318842 ABCA10Q8WWZ4 1543 aa12.85□□□□□ -0.35
RPGR-201ENST00000318842 RPRD2Q5VT52 1461 aaKnown RBP12.84□□□□□ -0.35
RPGR-201ENST00000318842 FBLN2P98095 1184 aa12.84□□□□□ -0.35
RPGR-201ENST00000318842 NBPF1Q3BBV0 1214 aa12.84□□□□□ -0.35
RPGR-201ENST00000318842 CTTNBP2Q8WZ74 1663 aa12.83□□□□□ -0.36
RPGR-201ENST00000318842 RGS3P49796 1198 aa12.83□□□□□ -0.36
RPGR-201ENST00000318842 URB2Q14146 1524 aaKnown RBP12.83□□□□□ -0.36
RPGR-201ENST00000318842 EIF5BO60841 1220 aaKnown RBP12.83□□□□□ -0.36
RPGR-201ENST00000318842 ABCC5O15440 1437 aa12.82□□□□□ -0.36
RPGR-201ENST00000318842 GAPVD1Q14C86 1478 aa12.82□□□□□ -0.36
RPGR-201ENST00000318842 RNF123Q5XPI4 1314 aa12.81□□□□□ -0.36
RPGR-201ENST00000318842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.36
RPGR-201ENST00000318842 CFDP1Q9UEE9 299 aaPredicted RBP12.81□□□□□ -0.36
RPGR-201ENST00000318842 DAPK1P53355 1430 aa12.81□□□□□ -0.36
RPGR-201ENST00000318842 EPRSP07814 1512 aaKnown RBP12.81□□□□□ -0.36
RPGR-201ENST00000318842 BACH2Q9BYV9 841 aa12.81□□□□□ -0.36
RPGR-201ENST00000318842 EHBP1L1Q8N3D4 1523 aa12.81□□□□□ -0.36
RPGR-201ENST00000318842 HECW1Q76N89 1606 aa12.8□□□□□ -0.36
RPGR-201ENST00000318842 PRG4Q92954 1404 aaPredicted RBP12.8□□□□□ -0.36
RPGR-201ENST00000318842 CC2D2AQ9P2K1 1620 aa12.79□□□□□ -0.36
RPGR-201ENST00000318842 DNMBPQ6XZF7 1577 aa12.78□□□□□ -0.36
RPGR-201ENST00000318842 FRAT1Q92837 279 aaPredicted RBP12.77□□□□□ -0.37
RPGR-201ENST00000318842 SLC24A1O60721 1099 aa12.77□□□□□ -0.37
RPGR-201ENST00000318842 PZPP20742 1482 aa12.76□□□□□ -0.37
RPGR-201ENST00000318842 CCDC146Q8IYE0 955 aa12.76□□□□□ -0.37
RPGR-201ENST00000318842 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
RPGR-201ENST00000318842 NUP155O75694 1391 aa12.75□□□□□ -0.37
RPGR-201ENST00000318842 SAMD9Q5K651 1589 aa12.75□□□□□ -0.37
RPGR-201ENST00000318842 FRAT2O75474 233 aaPredicted RBP12.75□□□□□ -0.37
RPGR-201ENST00000318842 HNRNPMP52272 730 aaKnown RBP eCLIP12.75□□□□□ -0.37
RPGR-201ENST00000318842 NFKBIBQ15653 356 aa12.75□□□□□ -0.37
RPGR-201ENST00000318842 GCC2Q8IWJ2 1684 aa12.75□□□□□ -0.37
RPGR-201ENST00000318842 MYT1LQ9UL68 1186 aa12.74□□□□□ -0.37
RPGR-201ENST00000318842 SENP3Q9H4L4 574 aaPredicted RBP12.74□□□□□ -0.37
RPGR-201ENST00000318842 MYBBP1AQ9BQG0 1328 aaKnown RBP12.74□□□□□ -0.37
RPGR-201ENST00000318842 LAMC3Q9Y6N6 1575 aa12.74□□□□□ -0.37
RPGR-201ENST00000318842 ARHGEF11O15085 1522 aa12.73□□□□□ -0.37
RPGR-201ENST00000318842 TCOF1Q13428 1488 aaKnown RBP12.72□□□□□ -0.37
RPGR-201ENST00000318842 TCERG1O14776 1098 aaKnown RBP12.72□□□□□ -0.37
RPGR-201ENST00000318842 SPRYD3Q8NCJ5 442 aa12.72□□□□□ -0.37
RPGR-201ENST00000318842 PANK3Q9H999 370 aa12.72□□□□□ -0.37
RPGR-201ENST00000318842 ADAMTS8Q9UP79 889 aa12.72□□□□□ -0.37
RPGR-201ENST00000318842 ROCK2O75116 1388 aaKnown RBP12.71□□□□□ -0.37
RPGR-201ENST00000318842 CUL7Q14999 1698 aa12.7□□□□□ -0.38
RPGR-201ENST00000318842 KIF15Q9NS87 1388 aa12.7□□□□□ -0.38
RPGR-201ENST00000318842 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
RPGR-201ENST00000318842 SLKQ9H2G2 1235 aaPredicted RBP12.68□□□□□ -0.38
RPGR-201ENST00000318842 LRPPRCP42704 1394 aaKnown RBP12.68□□□□□ -0.38
RPGR-201ENST00000318842 DISP3Q9P2K9 1392 aa12.68□□□□□ -0.38
RPGR-201ENST00000318842 DAXXQ9UER7 740 aaPredicted RBP12.67□□□□□ -0.38
RPGR-201ENST00000318842 BCAR3O75815 825 aa12.67□□□□□ -0.38
RPGR-201ENST00000318842 SEC24BO95487 1268 aa12.67□□□□□ -0.38
RPGR-201ENST00000318842 GSE1Q14687 1217 aa12.67□□□□□ -0.38
RPGR-201ENST00000318842 DMRT2Q9Y5R5 561 aa12.67□□□□□ -0.38
RPGR-201ENST00000318842 PLB1Q6P1J6 1458 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms