RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 WDR97A6NE52 1622 aa14.57□□□□□ -0.08
HNF4A-201ENST00000316099 CANXP27824 592 aaKnown RBP14.56□□□□□ -0.08
HNF4A-201ENST00000316099 NPM2Q86SE8 214 aaKnown RBP14.56□□□□□ -0.08
HNF4A-201ENST00000316099 EIF5BO60841 1220 aaKnown RBP14.55□□□□□ -0.08
HNF4A-201ENST00000316099 ANKRD30AQ9BXX3 1397 aa14.55□□□□□ -0.08
HNF4A-201ENST00000316099 CFAP43Q8NDM7 1665 aa14.54□□□□□ -0.08
HNF4A-201ENST00000316099 TIMELESSQ9UNS1 1208 aa14.53□□□□□ -0.08
HNF4A-201ENST00000316099 CHGAP10645 457 aaKnown RBP14.52□□□□□ -0.08
HNF4A-201ENST00000316099 EIF4G2P78344 907 aaKnown RBP eCLIP14.52□□□□□ -0.09
HNF4A-201ENST00000316099 PLB1Q6P1J6 1458 aa14.52□□□□□ -0.09
HNF4A-201ENST00000316099 BCL11AQ9H165 835 aa14.51□□□□□ -0.09
HNF4A-201ENST00000316099 SLC24A1O60721 1099 aa14.5□□□□□ -0.09
HNF4A-201ENST00000316099 PKD2Q13563 968 aa14.49□□□□□ -0.09
HNF4A-201ENST00000316099 EFCAB2Q5VUJ9 269 aa14.49□□□□□ -0.09
HNF4A-201ENST00000316099 UGGT2Q9NYU1 1516 aa14.49□□□□□ -0.09
HNF4A-201ENST00000316099 PTPN23Q9H3S7 1636 aa14.49□□□□□ -0.09
HNF4A-201ENST00000316099 RGL3Q3MIN7 710 aa14.49□□□□□ -0.09
HNF4A-201ENST00000316099 TROQ12816 1431 aaPredicted RBP14.48□□□□□ -0.09
HNF4A-201ENST00000316099 HNRNPUQ00839 825 aaKnown RBP eCLIP14.48□□□□□ -0.09
HNF4A-201ENST00000316099 ANP32BQ92688 251 aaKnown RBP14.48□□□□□ -0.09
HNF4A-201ENST00000316099 THOC2Q8NI27 1593 aaKnown RBP14.48□□□□□ -0.09
HNF4A-201ENST00000316099 OSCARQ8IYS5 282 aa14.48□□□□□ -0.09
HNF4A-201ENST00000316099 KIAA0556O60303 1618 aa14.48□□□□□ -0.09
HNF4A-201ENST00000316099 SAMD9Q5K651 1589 aa14.48□□□□□ -0.09
HNF4A-201ENST00000316099 RAPGEF6Q8TEU7 1601 aa14.47□□□□□ -0.09
HNF4A-201ENST00000316099 NUP155O75694 1391 aa14.47□□□□□ -0.09
HNF4A-201ENST00000316099 MIA2Q96PC5 1412 aa14.47□□□□□ -0.09
HNF4A-201ENST00000316099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.47□□□□□ -0.092e-7■□□□□ 10.3
HNF4A-201ENST00000316099 PPP1R15AO75807 674 aaPredicted RBP14.46□□□□□ -0.09
HNF4A-201ENST00000316099 UACAQ9BZF9 1416 aa14.45□□□□□ -0.1
HNF4A-201ENST00000316099 ANP32EQ9BTT0 268 aa14.45□□□□□ -0.1
HNF4A-201ENST00000316099 RSPH4AQ5TD94 716 aa14.43□□□□□ -0.1
HNF4A-201ENST00000316099 HFM1A2PYH4 1435 aa14.42□□□□□ -0.1
HNF4A-201ENST00000316099 NBR1Q14596 966 aa14.41□□□□□ -0.1
HNF4A-201ENST00000316099 UPF2Q9HAU5 1272 aaKnown RBP14.41□□□□□ -0.1
HNF4A-201ENST00000316099 CEP170Q5SW79 1584 aa14.41□□□□□ -0.1
HNF4A-201ENST00000316099 DAPK1P53355 1430 aa14.4□□□□□ -0.1
HNF4A-201ENST00000316099 ARHGAP5Q13017 1502 aa14.4□□□□□ -0.1
HNF4A-201ENST00000316099 DISP1Q96F81 1524 aa14.4□□□□□ -0.1
HNF4A-201ENST00000316099 CCDC136Q96JN2 1154 aa14.39□□□□□ -0.11
HNF4A-201ENST00000316099 NUP153P49790 1475 aaKnown RBP14.39□□□□□ -0.11
HNF4A-201ENST00000316099 L3MBTL2Q969R5 705 aa14.39□□□□□ -0.11
HNF4A-201ENST00000316099 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
HNF4A-201ENST00000316099 DCAF11Q8TEB1 546 aa14.38□□□□□ -0.11
HNF4A-201ENST00000316099 ESF1Q9H501 851 aaKnown RBP14.38□□□□□ -0.11
HNF4A-201ENST00000316099 CARD11Q9BXL7 1154 aa14.38□□□□□ -0.11
HNF4A-201ENST00000316099 KIF14Q15058 1648 aa14.37□□□□□ -0.11
HNF4A-201ENST00000316099 HSPA5P11021 654 aaKnown RBP14.37□□□□□ -0.11
HNF4A-201ENST00000316099 SPAG9O60271 1321 aaKnown RBP14.37□□□□□ -0.11
HNF4A-201ENST00000316099 NAIPQ13075 1403 aa14.37□□□□□ -0.11
HNF4A-201ENST00000316099 ARHGEF11O15085 1522 aa14.37□□□□□ -0.11
HNF4A-201ENST00000316099 NUP160Q12769 1436 aa14.36□□□□□ -0.11
HNF4A-201ENST00000316099 FAM9BQ8IZU0 186 aa14.36□□□□□ -0.11
HNF4A-201ENST00000316099 NEFMP07197 916 aa14.35□□□□□ -0.11
HNF4A-201ENST00000316099 CAMSAP2Q08AD1 1489 aa14.35□□□□□ -0.11
HNF4A-201ENST00000316099 KANK1Q14678 1352 aa14.35□□□□□ -0.11
HNF4A-201ENST00000316099 KIF15Q9NS87 1388 aa14.34□□□□□ -0.11
HNF4A-201ENST00000316099 PLEKHG5O94827 1062 aa14.34□□□□□ -0.11
HNF4A-201ENST00000316099 ANKRD50Q9ULJ7 1429 aa14.33□□□□□ -0.12
HNF4A-201ENST00000316099 PTPRKQ15262 1439 aa14.32□□□□□ -0.12
HNF4A-201ENST00000316099 ABCC5O15440 1437 aa14.31□□□□□ -0.12
HNF4A-201ENST00000316099 C9orf84Q5VXU9 1444 aa14.31□□□□□ -0.12
HNF4A-201ENST00000316099 HSP90AA1P07900 732 aaKnown RBP14.31□□□□□ -0.12
HNF4A-201ENST00000316099 CYB5RLQ6IPT4 315 aa14.31□□□□□ -0.12
HNF4A-201ENST00000316099 ATP10BO94823 1461 aa14.3□□□□□ -0.12
HNF4A-201ENST00000316099 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.3□□□□□ -0.12
HNF4A-201ENST00000316099 KIF3BO15066 747 aa14.29□□□□□ -0.12
HNF4A-201ENST00000316099 DDRGK1Q96HY6 314 aa14.29□□□□□ -0.12
HNF4A-201ENST00000316099 MAGI3Q5TCQ9 1506 aa14.28□□□□□ -0.12
HNF4A-201ENST00000316099 GGT6Q6P531 493 aa14.28□□□□□ -0.12
HNF4A-201ENST00000316099 ROCK1Q13464 1354 aa14.28□□□□□ -0.12
HNF4A-201ENST00000316099 ITSN2Q9NZM3 1697 aa14.28□□□□□ -0.12
HNF4A-201ENST00000316099 GPATCH8Q9UKJ3 1502 aaKnown RBP14.27□□□□□ -0.13
HNF4A-201ENST00000316099 MRS2Q9HD23 443 aa14.27□□□□□ -0.13
HNF4A-201ENST00000316099 SALL2Q9Y467 1007 aaPredicted RBP14.26□□□□□ -0.13
HNF4A-201ENST00000316099 CHD1O14646 1710 aa14.25□□□□□ -0.13
HNF4A-201ENST00000316099 TCOF1Q13428 1488 aaKnown RBP14.24□□□□□ -0.13
HNF4A-201ENST00000316099 TMC1Q8TDI8 760 aa14.24□□□□□ -0.13
HNF4A-201ENST00000316099 AKNAQ7Z591 1439 aa14.24□□□□□ -0.13
HNF4A-201ENST00000316099 MAPKBP1O60336 1514 aa14.23□□□□□ -0.13
HNF4A-201ENST00000316099 ROCK2O75116 1388 aaKnown RBP14.23□□□□□ -0.13
HNF4A-201ENST00000316099 CCDC144AA2RUR9 1427 aa14.23□□□□□ -0.13
HNF4A-201ENST00000316099 AFAP1Q8N556 730 aa14.23□□□□□ -0.13
HNF4A-201ENST00000316099 PLEKHH2Q8IVE3 1493 aa14.22□□□□□ -0.13
HNF4A-201ENST00000316099 CCDC141Q6ZP82 1450 aa14.2□□□□□ -0.14
HNF4A-201ENST00000316099 SENP3-EIF4A1A0A087X0R7 540 aa14.2□□□□□ -0.14
HNF4A-201ENST00000316099 IRX6P78412 446 aaPredicted RBP14.2□□□□□ -0.14
HNF4A-201ENST00000316099 ARID4BQ4LE39 1312 aaPredicted RBP14.19□□□□□ -0.14
HNF4A-201ENST00000316099 NCOA1Q15788 1441 aa14.18□□□□□ -0.14
HNF4A-201ENST00000316099 KIAA1107Q9UPP5 1409 aa14.18□□□□□ -0.14
HNF4A-201ENST00000316099 MLECQ14165 292 aa14.16□□□□□ -0.14
HNF4A-201ENST00000316099 BECN1Q14457 450 aa14.16□□□□□ -0.14
HNF4A-201ENST00000316099 PPM1GO15355 546 aaPredicted RBP14.16□□□□□ -0.14
HNF4A-201ENST00000316099 SUPT16HQ9Y5B9 1047 aaKnown RBP14.16□□□□□ -0.14
HNF4A-201ENST00000316099 ZBTB7CA1YPR0 619 aa14.16□□□□□ -0.14
HNF4A-201ENST00000316099 LRRIQ1Q96JM4 1722 aa14.15□□□□□ -0.14
HNF4A-201ENST00000316099 DNMT1P26358 1616 aaKnown RBP14.15□□□□□ -0.14
HNF4A-201ENST00000316099 CCER2I3L3R5 266 aa14.14□□□□□ -0.15
HNF4A-201ENST00000316099 WASHC2CQ9Y4E1 1318 aa14.14□□□□□ -0.15
HNF4A-201ENST00000316099 WDR43Q15061 677 aaKnown RBP eCLIP14.14□□□□□ -0.153e-15■■□□□ 11.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms