RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 CARMIL2Q6F5E8 1435 aa20.64■□□□□ 0.89
TFE3-201ENST00000315869 EHBP1L1Q8N3D4 1523 aa20.64■□□□□ 0.89
TFE3-201ENST00000315869 HSPA5P11021 654 aaKnown RBP20.63■□□□□ 0.89
TFE3-201ENST00000315869 ERICH6Q7L0X2 663 aa20.62■□□□□ 0.89
TFE3-201ENST00000315869 CFDP1Q9UEE9 299 aaPredicted RBP20.62■□□□□ 0.89
TFE3-201ENST00000315869 SUPT6HQ7KZ85 1726 aaKnown RBP20.62■□□□□ 0.89
TFE3-201ENST00000315869 NUP160Q12769 1436 aa20.6■□□□□ 0.89
TFE3-201ENST00000315869 PLEKHD1A6NEE1 506 aa20.59■□□□□ 0.89
TFE3-201ENST00000315869 EIF4G2P78344 907 aaKnown RBP eCLIP20.58■□□□□ 0.89
TFE3-201ENST00000315869 SENP3-EIF4A1A0A087X0R7 540 aa20.57■□□□□ 0.88
TFE3-201ENST00000315869 PTPN23Q9H3S7 1636 aa20.57■□□□□ 0.88
TFE3-201ENST00000315869 ZNF326Q5BKZ1 582 aaKnown RBP20.56■□□□□ 0.88
TFE3-201ENST00000315869 PTPRGP23470 1445 aa20.55■□□□□ 0.88
TFE3-201ENST00000315869 RAPGEF6Q8TEU7 1601 aa20.55■□□□□ 0.88
TFE3-201ENST00000315869 UACAQ9BZF9 1416 aa20.54■□□□□ 0.88
TFE3-201ENST00000315869 NAIPQ13075 1403 aa20.53■□□□□ 0.88
TFE3-201ENST00000315869 MRS2Q9HD23 443 aa20.53■□□□□ 0.88
TFE3-201ENST00000315869 WASHC2AQ641Q2 1341 aa20.5■□□□□ 0.87
TFE3-201ENST00000315869 L3MBTL2Q969R5 705 aa20.5■□□□□ 0.87
TFE3-201ENST00000315869 CCDC184Q52MB2 194 aa20.49■□□□□ 0.87
TFE3-201ENST00000315869 HFM1A2PYH4 1435 aa20.48■□□□□ 0.87
TFE3-201ENST00000315869 ERCC6L2Q5T890 1561 aa20.48■□□□□ 0.87
TFE3-201ENST00000315869 HNRNPMP52272 730 aaKnown RBP eCLIP20.48■□□□□ 0.87
TFE3-201ENST00000315869 MPHOSPH9Q99550 1183 aa20.47■□□□□ 0.87
TFE3-201ENST00000315869 CHD1O14646 1710 aa20.47■□□□□ 0.87
TFE3-201ENST00000315869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.46■□□□□ 0.87
TFE3-201ENST00000315869 TROQ12816 1431 aaPredicted RBP20.46■□□□□ 0.87
TFE3-201ENST00000315869 KIF14Q15058 1648 aa20.45■□□□□ 0.86
TFE3-201ENST00000315869 ATP10BO94823 1461 aa20.45■□□□□ 0.86
TFE3-201ENST00000315869 ARHGEF11O15085 1522 aa20.45■□□□□ 0.86
TFE3-201ENST00000315869 KDM6BO15054 1643 aa20.43■□□□□ 0.86
TFE3-201ENST00000315869 SLC4A1APQ9BWU0 796 aaKnown RBP20.43■□□□□ 0.86
TFE3-201ENST00000315869 B4GALNT3Q6L9W6 998 aa20.43■□□□□ 0.86
TFE3-201ENST00000315869 ABCC5O15440 1437 aa20.4■□□□□ 0.86
TFE3-201ENST00000315869 C11orf95C9JLR9 678 aaPredicted RBP20.39■□□□□ 0.85
TFE3-201ENST00000315869 DAPK1P53355 1430 aa20.39■□□□□ 0.85
TFE3-201ENST00000315869 MIA2Q96PC5 1412 aa20.37■□□□□ 0.85
TFE3-201ENST00000315869 GPATCH8Q9UKJ3 1502 aaKnown RBP20.37■□□□□ 0.85
TFE3-201ENST00000315869 PRKRIP1Q9H875 184 aaPredicted RBP20.36■□□□□ 0.85
TFE3-201ENST00000315869 TCOF1Q13428 1488 aaKnown RBP20.35■□□□□ 0.85
TFE3-201ENST00000315869 CAMSAP2Q08AD1 1489 aa20.34■□□□□ 0.85
TFE3-201ENST00000315869 PPP4R2Q9NY27 417 aa20.34■□□□□ 0.85
TFE3-201ENST00000315869 MSH5O43196 834 aa20.33■□□□□ 0.84
TFE3-201ENST00000315869 NBPF8Q3BBV2 869 aa20.32■□□□□ 0.84
TFE3-201ENST00000315869 TSPY4P0CV99 314 aa20.31■□□□□ 0.84
TFE3-201ENST00000315869 TSPY10P0CW01 314 aa20.31■□□□□ 0.84
TFE3-201ENST00000315869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.31■□□□□ 0.84
TFE3-201ENST00000315869 ABCA8O94911 1581 aa20.31■□□□□ 0.84
TFE3-201ENST00000315869 BCL11AQ9H165 835 aa20.3■□□□□ 0.84
TFE3-201ENST00000315869 MYT1LQ9UL68 1186 aa20.3■□□□□ 0.84
TFE3-201ENST00000315869 CCDC7Q96M83 1385 aa20.27■□□□□ 0.83
TFE3-201ENST00000315869 CNTLNQ9NXG0 1405 aa20.25■□□□□ 0.83
TFE3-201ENST00000315869 PKD2Q13563 968 aa20.24■□□□□ 0.83
TFE3-201ENST00000315869 DENND4BO75064 1496 aaPredicted RBP20.24■□□□□ 0.83
TFE3-201ENST00000315869 SALL2Q9Y467 1007 aaPredicted RBP20.24■□□□□ 0.83
TFE3-201ENST00000315869 KDM2AQ9Y2K7 1162 aa20.24■□□□□ 0.83
TFE3-201ENST00000315869 KIF7Q2M1P5 1343 aa20.23■□□□□ 0.83
TFE3-201ENST00000315869 NCOA1Q15788 1441 aa20.21■□□□□ 0.83
TFE3-201ENST00000315869 AKNAQ7Z591 1439 aa20.21■□□□□ 0.83
TFE3-201ENST00000315869 CCDC136Q96JN2 1154 aa20.19■□□□□ 0.82
TFE3-201ENST00000315869 TMC1Q8TDI8 760 aa20.18■□□□□ 0.82
TFE3-201ENST00000315869 ANKRD30AQ9BXX3 1397 aa20.18■□□□□ 0.82
TFE3-201ENST00000315869 DNMT1P26358 1616 aaKnown RBP20.18■□□□□ 0.82
TFE3-201ENST00000315869 ABCC10Q5T3U5 1492 aa20.18■□□□□ 0.82
TFE3-201ENST00000315869 NUP155O75694 1391 aa20.18■□□□□ 0.82
TFE3-201ENST00000315869 ZBED9Q6R2W3 1325 aa20.17■□□□□ 0.82
TFE3-201ENST00000315869 NBR1Q14596 966 aa20.17■□□□□ 0.82
TFE3-201ENST00000315869 C9orf84Q5VXU9 1444 aa20.16■□□□□ 0.82
TFE3-201ENST00000315869 FANCIQ9NVI1 1328 aa20.15■□□□□ 0.82
TFE3-201ENST00000315869 ANKRD50Q9ULJ7 1429 aa20.14■□□□□ 0.82
TFE3-201ENST00000315869 ARHGAP5Q13017 1502 aa20.14■□□□□ 0.81
TFE3-201ENST00000315869 ROCK1Q13464 1354 aa20.13■□□□□ 0.81
TFE3-201ENST00000315869 CDC42BPAQ5VT25 1732 aa20.13■□□□□ 0.81
TFE3-201ENST00000315869 OSCARQ8IYS5 282 aa20.13■□□□□ 0.81
TFE3-201ENST00000315869 KIF15Q9NS87 1388 aa20.13■□□□□ 0.81
TFE3-201ENST00000315869 AFAP1Q8N556 730 aa20.13■□□□□ 0.81
TFE3-201ENST00000315869 ERICH6BQ5W0A0 696 aa20.12■□□□□ 0.81
TFE3-201ENST00000315869 GCC2Q8IWJ2 1684 aa20.12■□□□□ 0.81
TFE3-201ENST00000315869 KDM5BQ9UGL1 1544 aa20.11■□□□□ 0.81
TFE3-201ENST00000315869 ANKRD30BQ9BXX2 1392 aa20.11■□□□□ 0.81
TFE3-201ENST00000315869 RGL3Q3MIN7 710 aa20.1■□□□□ 0.81
TFE3-201ENST00000315869 CARD11Q9BXL7 1154 aa20.1■□□□□ 0.81
TFE3-201ENST00000315869 ITSN2Q9NZM3 1697 aa20.1■□□□□ 0.81
TFE3-201ENST00000315869 TTC37Q6PGP7 1564 aa20.09■□□□□ 0.81
TFE3-201ENST00000315869 ABCC2Q92887 1545 aa20.08■□□□□ 0.81
TFE3-201ENST00000315869 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
TFE3-201ENST00000315869 SHROOM2Q13796 1616 aa20.07■□□□□ 0.8
TFE3-201ENST00000315869 NPM2Q86SE8 214 aaKnown RBP20.06■□□□□ 0.8
TFE3-201ENST00000315869 SYCP2Q9BX26 1530 aa20.06■□□□□ 0.8
TFE3-201ENST00000315869 CLASP1Q7Z460 1538 aa20.05■□□□□ 0.8
TFE3-201ENST00000315869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.05■□□□□ 0.88e-8■■■■□ 22.6
TFE3-201ENST00000315869 USP47Q96K76 1375 aa20.05■□□□□ 0.8
TFE3-201ENST00000315869 PZPP20742 1482 aa20.05■□□□□ 0.8
TFE3-201ENST00000315869 ADCY10Q96PN6 1610 aa20.05■□□□□ 0.8
TFE3-201ENST00000315869 EFCAB2Q5VUJ9 269 aa20.04■□□□□ 0.8
TFE3-201ENST00000315869 NUDCQ9Y266 331 aa20.04■□□□□ 0.8
TFE3-201ENST00000315869 SAMD9LQ8IVG5 1584 aa20.03■□□□□ 0.8
TFE3-201ENST00000315869 MBD5Q9P267 1494 aa20.03■□□□□ 0.8
TFE3-201ENST00000315869 DCAF11Q8TEB1 546 aa20.02■□□□□ 0.8
TFE3-201ENST00000315869 ANP32AP39687 249 aaKnown RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms