RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 LRRIQ1Q96JM4 1722 aa12.52□□□□□ -0.41
CDC42-201ENST00000315554 FYCO1Q9BQS8 1478 aa12.51□□□□□ -0.41
CDC42-201ENST00000315554 POLA2Q14181 598 aa12.51□□□□□ -0.41
CDC42-201ENST00000315554 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
CDC42-201ENST00000315554 PLEKHD1A6NEE1 506 aa12.49□□□□□ -0.41
CDC42-201ENST00000315554 VPS8Q8N3P4 1428 aa12.48□□□□□ -0.41
CDC42-201ENST00000315554 TSPOAP1O95153 1857 aa12.46□□□□□ -0.41
CDC42-201ENST00000315554 CCDC18Q5T9S5 1454 aa12.46□□□□□ -0.42
CDC42-201ENST00000315554 GLI2P10070 1586 aa12.46□□□□□ -0.42
CDC42-201ENST00000315554 MAGI3Q5TCQ9 1506 aa12.44□□□□□ -0.42
CDC42-201ENST00000315554 CDK11AQ9UQ88 783 aaPredicted RBP12.44□□□□□ -0.42
CDC42-201ENST00000315554 MAP3K4Q9Y6R4 1608 aa12.43□□□□□ -0.42
CDC42-201ENST00000315554 PIP4P2Q8N4L2 257 aa12.42□□□□□ -0.42
CDC42-201ENST00000315554 TROQ12816 1431 aaPredicted RBP12.42□□□□□ -0.42
CDC42-201ENST00000315554 CD109Q6YHK3 1445 aa12.42□□□□□ -0.42
CDC42-201ENST00000315554 KIF14Q15058 1648 aa12.42□□□□□ -0.42
CDC42-201ENST00000315554 PPRC1Q5VV67 1664 aaKnown RBP12.41□□□□□ -0.42
CDC42-201ENST00000315554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.4□□□□□ -0.422e-6■□□□□ 10.8
CDC42-201ENST00000315554 TTC37Q6PGP7 1564 aa12.4□□□□□ -0.42
CDC42-201ENST00000315554 ABCA9Q8IUA7 1624 aa12.4□□□□□ -0.42
CDC42-201ENST00000315554 KCNA4P22459 653 aa12.4□□□□□ -0.43
CDC42-201ENST00000315554 CFAP43Q8NDM7 1665 aa12.39□□□□□ -0.43
CDC42-201ENST00000315554 MTUS2Q5JR59 1369 aa12.38□□□□□ -0.43
CDC42-201ENST00000315554 TIAM1Q13009 1591 aa12.38□□□□□ -0.43
CDC42-201ENST00000315554 KANK4Q5T7N3 995 aaPredicted RBP12.36□□□□□ -0.43
CDC42-201ENST00000315554 TEX14Q8IWB6 1497 aa12.35□□□□□ -0.43
CDC42-201ENST00000315554 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
CDC42-201ENST00000315554 REM2Q8IYK8 340 aaPredicted RBP12.34□□□□□ -0.43
CDC42-201ENST00000315554 EHBP1L1Q8N3D4 1523 aa12.34□□□□□ -0.43
CDC42-201ENST00000315554 HAX1O00165 279 aa12.33□□□□□ -0.44
CDC42-201ENST00000315554 LRRC9Q6ZRR7 1453 aa12.32□□□□□ -0.44
CDC42-201ENST00000315554 COL17A1Q9UMD9 1497 aaPredicted RBP12.32□□□□□ -0.44
CDC42-201ENST00000315554 KDM6BO15054 1643 aa12.32□□□□□ -0.44
CDC42-201ENST00000315554 PLCH2O75038 1416 aa12.31□□□□□ -0.44
CDC42-201ENST00000315554 PPARGC1BQ86YN6 1023 aaKnown RBP12.31□□□□□ -0.44
CDC42-201ENST00000315554 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
CDC42-201ENST00000315554 FANCAO15360 1455 aa12.31□□□□□ -0.44
CDC42-201ENST00000315554 MYO5CQ9NQX4 1742 aa12.31□□□□□ -0.44
CDC42-201ENST00000315554 ARHGAP5Q13017 1502 aa12.3□□□□□ -0.44
CDC42-201ENST00000315554 MAP3K1Q13233 1512 aa12.3□□□□□ -0.44
CDC42-201ENST00000315554 CCNB3Q8WWL7 1395 aa12.3□□□□□ -0.44
CDC42-201ENST00000315554 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.442e-6■□□□□ 9.9
CDC42-201ENST00000315554 NCOA2Q15596 1464 aa12.29□□□□□ -0.44
CDC42-201ENST00000315554 AKNAQ7Z591 1439 aa12.29□□□□□ -0.44
CDC42-201ENST00000315554 EFCAB2Q5VUJ9 269 aa12.28□□□□□ -0.44
CDC42-201ENST00000315554 ZNF777Q9ULD5 760 aaPredicted RBP12.28□□□□□ -0.44
CDC42-201ENST00000315554 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
CDC42-201ENST00000315554 GPATCH8Q9UKJ3 1502 aaKnown RBP12.28□□□□□ -0.44
CDC42-201ENST00000315554 NEO1Q92859 1461 aa12.28□□□□□ -0.44
CDC42-201ENST00000315554 RAPGEF3O95398 923 aa12.27□□□□□ -0.44
CDC42-201ENST00000315554 CDC42BPAQ5VT25 1732 aa12.27□□□□□ -0.44
CDC42-201ENST00000315554 PREX2Q70Z35 1606 aa12.27□□□□□ -0.45
CDC42-201ENST00000315554 CDC42BPBQ9Y5S2 1711 aa12.27□□□□□ -0.45
CDC42-201ENST00000315554 CFDP1Q9UEE9 299 aaPredicted RBP12.26□□□□□ -0.45
CDC42-201ENST00000315554 ADGRL1O94910 1474 aa12.25□□□□□ -0.45
CDC42-201ENST00000315554 CFAP74Q9C0B2 1584 aa12.25□□□□□ -0.45
CDC42-201ENST00000315554 SCAPERQ9BY12 1400 aa12.24□□□□□ -0.45
CDC42-201ENST00000315554 ARAP3Q8WWN8 1544 aa12.24□□□□□ -0.45
CDC42-201ENST00000315554 ZNF644Q9H582 1327 aaPredicted RBP12.24□□□□□ -0.45
CDC42-201ENST00000315554 DENND4BO75064 1496 aaPredicted RBP12.22□□□□□ -0.45
CDC42-201ENST00000315554 PHLDB1Q86UU1 1377 aa12.22□□□□□ -0.45
CDC42-201ENST00000315554 FRMPD1Q5SYB0 1578 aa12.22□□□□□ -0.45
CDC42-201ENST00000315554 SAMD9LQ8IVG5 1584 aa12.22□□□□□ -0.45
CDC42-201ENST00000315554 ARHGEF12Q9NZN5 1544 aa12.21□□□□□ -0.45
CDC42-201ENST00000315554 ITSN2Q9NZM3 1697 aa12.21□□□□□ -0.46
CDC42-201ENST00000315554 PITPNM1O00562 1244 aa12.21□□□□□ -0.46
CDC42-201ENST00000315554 HNRNPMP52272 730 aaKnown RBP eCLIP12.21□□□□□ -0.464e-7■■□□□ 11.8
CDC42-201ENST00000315554 ABCC1P33527 1531 aa12.2□□□□□ -0.46
CDC42-201ENST00000315554 POGZQ7Z3K3 1410 aa12.2□□□□□ -0.46
CDC42-201ENST00000315554 AFAP1Q8N556 730 aa12.2□□□□□ -0.46
CDC42-201ENST00000315554 SYCP2Q9BX26 1530 aa12.19□□□□□ -0.46
CDC42-201ENST00000315554 MYOM3Q5VTT5 1437 aa12.19□□□□□ -0.46
CDC42-201ENST00000315554 TRAPPC8Q9Y2L5 1435 aa12.19□□□□□ -0.46
CDC42-201ENST00000315554 RICTORQ6R327 1708 aa12.18□□□□□ -0.46
CDC42-201ENST00000315554 CAMSAP2Q08AD1 1489 aa12.17□□□□□ -0.46
CDC42-201ENST00000315554 MYT1LQ9UL68 1186 aa12.17□□□□□ -0.46
CDC42-201ENST00000315554 YEATS2Q9ULM3 1422 aa12.15□□□□□ -0.46
CDC42-201ENST00000315554 FGD6Q6ZV73 1430 aa12.14□□□□□ -0.47
CDC42-201ENST00000315554 ZNF518AQ6AHZ1 1483 aa12.14□□□□□ -0.47
CDC42-201ENST00000315554 PLEKHH2Q8IVE3 1493 aa12.14□□□□□ -0.47
CDC42-201ENST00000315554 KIAA1107Q9UPP5 1409 aa12.13□□□□□ -0.47
CDC42-201ENST00000315554 EVX2Q03828 476 aa12.13□□□□□ -0.47
CDC42-201ENST00000315554 MIA2Q96PC5 1412 aa12.13□□□□□ -0.47
CDC42-201ENST00000315554 MBD5Q9P267 1494 aa12.13□□□□□ -0.47
CDC42-201ENST00000315554 ZMYM4Q5VZL5 1548 aa12.13□□□□□ -0.47
CDC42-201ENST00000315554 ZFYVE16Q7Z3T8 1539 aa12.13□□□□□ -0.47
CDC42-201ENST00000315554 PTPN23Q9H3S7 1636 aa12.12□□□□□ -0.47
CDC42-201ENST00000315554 KDM5CP41229 1560 aa12.12□□□□□ -0.47
CDC42-201ENST00000315554 FAM50AQ14320 339 aaKnown RBP12.12□□□□□ -0.47
CDC42-201ENST00000315554 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
CDC42-201ENST00000315554 ARHGEF40Q8TER5 1519 aa12.11□□□□□ -0.47
CDC42-201ENST00000315554 HECW2Q9P2P5 1572 aa12.1□□□□□ -0.47
CDC42-201ENST00000315554 CCDC141Q6ZP82 1450 aa12.09□□□□□ -0.47
CDC42-201ENST00000315554 ARID4BQ4LE39 1312 aaPredicted RBP12.09□□□□□ -0.47
CDC42-201ENST00000315554 TCOF1Q13428 1488 aaKnown RBP12.08□□□□□ -0.48
CDC42-201ENST00000315554 MAGI2Q86UL8 1455 aa12.08□□□□□ -0.48
CDC42-201ENST00000315554 ABCA6Q8N139 1617 aa12.08□□□□□ -0.48
CDC42-201ENST00000315554 MLH3Q9UHC1 1453 aa12.07□□□□□ -0.48
CDC42-201ENST00000315554 DIP2CQ9Y2E4 1556 aa12.07□□□□□ -0.48
CDC42-201ENST00000315554 KIDINS220Q9ULH0 1771 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms