RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 HSP90AB1P08238 724 aaKnown RBP19.61■□□□□ 0.73
KDM3A-201ENST00000312912 KANK1Q14678 1352 aa19.61■□□□□ 0.73
KDM3A-201ENST00000312912 KTN1Q86UP2 1357 aaKnown RBP19.61■□□□□ 0.73
KDM3A-201ENST00000312912 MPHOSPH9Q99550 1183 aa19.61■□□□□ 0.73
KDM3A-201ENST00000312912 RALBP1Q15311 655 aa19.6■□□□□ 0.73
KDM3A-201ENST00000312912 PODXL2Q9NZ53 605 aa19.6■□□□□ 0.73
KDM3A-201ENST00000312912 ANO8Q9HCE9 1232 aaPredicted RBP19.59■□□□□ 0.73
KDM3A-201ENST00000312912 FMN1Q68DA7 1419 aa19.59■□□□□ 0.73
KDM3A-201ENST00000312912 EIF4G1Q04637 1599 aaKnown RBP19.59■□□□□ 0.73
KDM3A-201ENST00000312912 ABCC8Q09428 1581 aa19.58■□□□□ 0.73
KDM3A-201ENST00000312912 MORC1Q86VD1 984 aa19.58■□□□□ 0.73
KDM3A-201ENST00000312912 TDRD9Q8NDG6 1382 aaKnown RBP19.58■□□□□ 0.72
KDM3A-201ENST00000312912 RCAN3Q9UKA8 241 aa19.57■□□□□ 0.72
KDM3A-201ENST00000312912 HAP1P54257 671 aaPredicted RBP19.57■□□□□ 0.72
KDM3A-201ENST00000312912 TCERG1O14776 1098 aaKnown RBP19.57■□□□□ 0.72
KDM3A-201ENST00000312912 PLEKHG5O94827 1062 aa19.57■□□□□ 0.72
KDM3A-201ENST00000312912 MSNP26038 577 aaKnown RBP19.56■□□□□ 0.72
KDM3A-201ENST00000312912 HSCBQ8IWL3 235 aa19.56■□□□□ 0.72
KDM3A-201ENST00000312912 HDGFP51858 240 aaKnown RBP19.55■□□□□ 0.72
KDM3A-201ENST00000312912 CFAP44Q96MT7 982 aa19.55■□□□□ 0.72
KDM3A-201ENST00000312912 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
KDM3A-201ENST00000312912 A0A0G2JS52 829 aa19.54■□□□□ 0.72
KDM3A-201ENST00000312912 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
KDM3A-201ENST00000312912 FOXD1Q16676 465 aa19.54■□□□□ 0.72
KDM3A-201ENST00000312912 USP35Q9P2H5 1018 aa19.52■□□□□ 0.72
KDM3A-201ENST00000312912 IPO9Q96P70 1041 aaKnown RBP19.5■□□□□ 0.71
KDM3A-201ENST00000312912 IPO8O15397 1037 aaKnown RBP19.5■□□□□ 0.71
KDM3A-201ENST00000312912 SRPK2P78362 688 aaKnown RBP19.5■□□□□ 0.71
KDM3A-201ENST00000312912 NUP155O75694 1391 aa19.49■□□□□ 0.71
KDM3A-201ENST00000312912 L3MBTL2Q969R5 705 aa19.49■□□□□ 0.71
KDM3A-201ENST00000312912 ANKRD30AQ9BXX3 1397 aa19.48■□□□□ 0.71
KDM3A-201ENST00000312912 OS9Q13438 667 aaPredicted RBP19.47■□□□□ 0.71
KDM3A-201ENST00000312912 FANCIQ9NVI1 1328 aa19.47■□□□□ 0.71
KDM3A-201ENST00000312912 PDE3BQ13370 1112 aa19.47■□□□□ 0.71
KDM3A-201ENST00000312912 MLECQ14165 292 aa19.47■□□□□ 0.71
KDM3A-201ENST00000312912 ROCK2O75116 1388 aaKnown RBP19.46■□□□□ 0.71
KDM3A-201ENST00000312912 KCNJ4P48050 445 aa19.45■□□□□ 0.7
KDM3A-201ENST00000312912 PLCB2Q00722 1185 aa19.45■□□□□ 0.7
KDM3A-201ENST00000312912 NLRP13Q86W25 1043 aa19.45■□□□□ 0.7
KDM3A-201ENST00000312912 RWDD1Q9H446 243 aaPredicted RBP19.44■□□□□ 0.7
KDM3A-201ENST00000312912 FGD1P98174 961 aa19.44■□□□□ 0.7
KDM3A-201ENST00000312912 TPRNQ4KMQ1 711 aa19.44■□□□□ 0.7
KDM3A-201ENST00000312912 EFCAB2Q5VUJ9 269 aa19.43■□□□□ 0.7
KDM3A-201ENST00000312912 MCCP23508 829 aa19.43■□□□□ 0.7
KDM3A-201ENST00000312912 CHAF1AQ13111 956 aaPredicted RBP19.42■□□□□ 0.7
KDM3A-201ENST00000312912 A0A0U1RQG5 324 aaPredicted RBP19.42■□□□□ 0.7
KDM3A-201ENST00000312912 TNNT3P45378 269 aaPredicted RBP19.42■□□□□ 0.7
KDM3A-201ENST00000312912 NRDCO43847 1150 aa19.41■□□□□ 0.7
KDM3A-201ENST00000312912 CALD1Q05682 793 aaKnown RBP19.41■□□□□ 0.7
KDM3A-201ENST00000312912 U2AF1L5P0DN76 240 aaPredicted RBP19.4■□□□□ 0.7
KDM3A-201ENST00000312912 U2AF1Q01081 240 aaKnown RBP eCLIP19.4■□□□□ 0.76e-7■□□□□ 10.6
KDM3A-201ENST00000312912 LMOD2Q6P5Q4 547 aa19.4■□□□□ 0.7
KDM3A-201ENST00000312912 HDGFL2Q7Z4V5 671 aaPredicted RBP19.4■□□□□ 0.7
KDM3A-201ENST00000312912 TOP2AP11388 1531 aaKnown RBP19.4■□□□□ 0.7
KDM3A-201ENST00000312912 GOLGA6L4A6NEF3 574 aa19.4■□□□□ 0.7
KDM3A-201ENST00000312912 DHX57Q6P158 1386 aaKnown RBP19.39■□□□□ 0.7
KDM3A-201ENST00000312912 GOLGA2Q08379 1002 aa19.39■□□□□ 0.69
KDM3A-201ENST00000312912 RSPH4AQ5TD94 716 aa19.39■□□□□ 0.69
KDM3A-201ENST00000312912 GOLGA6L6A8MZA4 724 aa19.38■□□□□ 0.69
KDM3A-201ENST00000312912 RAPGEF2Q9Y4G8 1499 aa19.37■□□□□ 0.69
KDM3A-201ENST00000312912 GGT6Q6P531 493 aa19.37■□□□□ 0.69
KDM3A-201ENST00000312912 JPH4Q96JJ6 628 aa19.37■□□□□ 0.69
KDM3A-201ENST00000312912 SAFB2Q14151 953 aaKnown RBP eCLIP19.37■□□□□ 0.69
KDM3A-201ENST00000312912 FANCD2Q9BXW9 1451 aa19.37■□□□□ 0.69
KDM3A-201ENST00000312912 CYB5RLQ6IPT4 315 aa19.37■□□□□ 0.69
KDM3A-201ENST00000312912 PTMSP20962 102 aa19.36■□□□□ 0.69
KDM3A-201ENST00000312912 PMFBP1Q8TBY8 1022 aa19.36■□□□□ 0.69
KDM3A-201ENST00000312912 GBP4Q96PP9 640 aa19.36■□□□□ 0.69
KDM3A-201ENST00000312912 ARID3AQ99856 593 aa19.36■□□□□ 0.69
KDM3A-201ENST00000312912 RTF1Q92541 710 aaKnown RBP19.35■□□□□ 0.69
KDM3A-201ENST00000312912 GSE1Q14687 1217 aa19.34■□□□□ 0.69
KDM3A-201ENST00000312912 SPRYD3Q8NCJ5 442 aa19.33■□□□□ 0.69
KDM3A-201ENST00000312912 PHLDB1Q86UU1 1377 aa19.33■□□□□ 0.69
KDM3A-201ENST00000312912 GOLGA6L3A6NEY3 463 aa19.32■□□□□ 0.68
KDM3A-201ENST00000312912 EIF3AQ14152 1382 aaKnown RBP19.32■□□□□ 0.68
KDM3A-201ENST00000312912 STK26Q9P289 416 aa19.31■□□□□ 0.68
KDM3A-201ENST00000312912 FHOD3Q2V2M9 1422 aa19.31■□□□□ 0.68
KDM3A-201ENST00000312912 ITPRIPQ8IWB1 547 aa19.3■□□□□ 0.68
KDM3A-201ENST00000312912 SLKQ9H2G2 1235 aaPredicted RBP19.3■□□□□ 0.68
KDM3A-201ENST00000312912 SMARCA4P51532 1647 aa19.29■□□□□ 0.68
KDM3A-201ENST00000312912 CHMP4AQ9BY43 222 aa19.29■□□□□ 0.68
KDM3A-201ENST00000312912 SOX12O15370 315 aa19.28■□□□□ 0.68
KDM3A-201ENST00000312912 PRKRIP1Q9H875 184 aaPredicted RBP19.28■□□□□ 0.68
KDM3A-201ENST00000312912 CCDC18Q5T9S5 1454 aa19.27■□□□□ 0.68
KDM3A-201ENST00000312912 KIF15Q9NS87 1388 aa19.27■□□□□ 0.68
KDM3A-201ENST00000312912 WIZO95785 1651 aa19.27■□□□□ 0.68
KDM3A-201ENST00000312912 KIAA1211Q6ZU35 1233 aa19.27■□□□□ 0.68
KDM3A-201ENST00000312912 NAP1L2Q9ULW6 460 aaPredicted RBP19.27■□□□□ 0.68
KDM3A-201ENST00000312912 MYBBP1AQ9BQG0 1328 aaKnown RBP19.26■□□□□ 0.67
KDM3A-201ENST00000312912 SMC4Q9NTJ3 1288 aa19.25■□□□□ 0.67
KDM3A-201ENST00000312912 CENPJQ9HC77 1338 aaPredicted RBP19.25■□□□□ 0.67
KDM3A-201ENST00000312912 TERF2IPQ9NYB0 399 aa19.24■□□□□ 0.67
KDM3A-201ENST00000312912 NCAPD3P42695 1498 aa19.24■□□□□ 0.67
KDM3A-201ENST00000312912 KIF3BO15066 747 aa19.23■□□□□ 0.67
KDM3A-201ENST00000312912 HNRNPMP52272 730 aaKnown RBP eCLIP19.23■□□□□ 0.673e-8■■■■□ 20.7
KDM3A-201ENST00000312912 ST20-MTHFSA0A0A6YYL1 179 aa19.23■□□□□ 0.67
KDM3A-201ENST00000312912 APBB1O00213 710 aa19.23■□□□□ 0.67
KDM3A-201ENST00000312912 ZBED9Q6R2W3 1325 aa19.23■□□□□ 0.67
KDM3A-201ENST00000312912 UBE2Q2Q8WVN8 375 aa19.22■□□□□ 0.67
KDM3A-201ENST00000312912 AEBP2Q6ZN18 517 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms