RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 GLI2P10070 1586 aa26.51■■□□□ 1.83
HERPUD2-201ENST00000311350 FGD6Q6ZV73 1430 aa26.51■■□□□ 1.83
HERPUD2-201ENST00000311350 EPRSP07814 1512 aaKnown RBP26.5■■□□□ 1.83
HERPUD2-201ENST00000311350 WDR7Q9Y4E6 1490 aa26.49■■□□□ 1.83
HERPUD2-201ENST00000311350 PPP1R15AO75807 674 aaPredicted RBP26.48■■□□□ 1.83
HERPUD2-201ENST00000311350 HIRIP3Q9BW71 556 aaPredicted RBP26.47■■□□□ 1.83
HERPUD2-201ENST00000311350 SIN3AQ96ST3 1273 aa26.47■■□□□ 1.83
HERPUD2-201ENST00000311350 ARID3CA6NKF2 412 aa26.44■■□□□ 1.82
HERPUD2-201ENST00000311350 HFM1A2PYH4 1435 aa26.43■■□□□ 1.82
HERPUD2-201ENST00000311350 RAPGEF6Q8TEU7 1601 aa26.43■■□□□ 1.82
HERPUD2-201ENST00000311350 ATP10BO94823 1461 aa26.43■■□□□ 1.82
HERPUD2-201ENST00000311350 CCER2I3L3R5 266 aa26.43■■□□□ 1.82
HERPUD2-201ENST00000311350 TSPOAP1O95153 1857 aa26.43■■□□□ 1.82
HERPUD2-201ENST00000311350 CCDC18Q5T9S5 1454 aa26.38■■□□□ 1.81
HERPUD2-201ENST00000311350 NUP153P49790 1475 aaKnown RBP26.37■■□□□ 1.81
HERPUD2-201ENST00000311350 PTPN23Q9H3S7 1636 aa26.37■■□□□ 1.81
HERPUD2-201ENST00000311350 MAP3K4Q9Y6R4 1608 aa26.37■■□□□ 1.81
HERPUD2-201ENST00000311350 ATP1B4Q9UN42 357 aaPredicted RBP26.36■■□□□ 1.81
HERPUD2-201ENST00000311350 IRX6P78412 446 aaPredicted RBP26.35■■□□□ 1.81
HERPUD2-201ENST00000311350 MTUS2Q5JR59 1369 aa26.34■■□□□ 1.81
HERPUD2-201ENST00000311350 PPRC1Q5VV67 1664 aaKnown RBP26.34■■□□□ 1.81
HERPUD2-201ENST00000311350 EHBP1L1Q8N3D4 1523 aa26.34■■□□□ 1.81
HERPUD2-201ENST00000311350 KDM6BO15054 1643 aa26.33■■□□□ 1.81
HERPUD2-201ENST00000311350 MYOM3Q5VTT5 1437 aa26.33■■□□□ 1.81
HERPUD2-201ENST00000311350 FANCIQ9NVI1 1328 aa26.33■■□□□ 1.81
HERPUD2-201ENST00000311350 ERICH6Q7L0X2 663 aa26.32■■□□□ 1.8
HERPUD2-201ENST00000311350 TONSLQ96HA7 1378 aa26.3■■□□□ 1.8
HERPUD2-201ENST00000311350 NCOA2Q15596 1464 aa26.3■■□□□ 1.8
HERPUD2-201ENST00000311350 TEX14Q8IWB6 1497 aa26.3■■□□□ 1.8
HERPUD2-201ENST00000311350 SUPT6HQ7KZ85 1726 aaKnown RBP26.3■■□□□ 1.8
HERPUD2-201ENST00000311350 PTPRKQ15262 1439 aa26.29■■□□□ 1.8
HERPUD2-201ENST00000311350 NAIPQ13075 1403 aa26.28■■□□□ 1.8
HERPUD2-201ENST00000311350 CD109Q6YHK3 1445 aa26.28■■□□□ 1.8
HERPUD2-201ENST00000311350 ANP32CO43423 234 aa26.27■■□□□ 1.8
HERPUD2-201ENST00000311350 LRRIQ1Q96JM4 1722 aa26.27■■□□□ 1.8
HERPUD2-201ENST00000311350 PRKCSHP14314 528 aaPredicted RBP26.25■■□□□ 1.79
HERPUD2-201ENST00000311350 CDK11AQ9UQ88 783 aaPredicted RBP26.24■■□□□ 1.79
HERPUD2-201ENST00000311350 MAGI3Q5TCQ9 1506 aa26.23■■□□□ 1.79
HERPUD2-201ENST00000311350 TCOF1Q13428 1488 aaKnown RBP26.22■■□□□ 1.79
HERPUD2-201ENST00000311350 AKNAQ7Z591 1439 aa26.22■■□□□ 1.79
HERPUD2-201ENST00000311350 PLEKHD1A6NEE1 506 aa26.2■■□□□ 1.78
HERPUD2-201ENST00000311350 COL17A1Q9UMD9 1497 aaPredicted RBP26.17■■□□□ 1.78
HERPUD2-201ENST00000311350 DEKP35659 375 aaKnown RBP26.16■■□□□ 1.78
HERPUD2-201ENST00000311350 ABCA9Q8IUA7 1624 aa26.16■■□□□ 1.78
HERPUD2-201ENST00000311350 GCC2Q8IWJ2 1684 aa26.16■■□□□ 1.78
HERPUD2-201ENST00000311350 CDK13Q14004 1512 aaKnown RBP26.15■■□□□ 1.78
HERPUD2-201ENST00000311350 HECW1Q76N89 1606 aa26.14■■□□□ 1.78
HERPUD2-201ENST00000311350 HNRNPUQ00839 825 aaKnown RBP eCLIP26.1■■□□□ 1.77
HERPUD2-201ENST00000311350 MIA2Q96PC5 1412 aa26.07■■□□□ 1.76
HERPUD2-201ENST00000311350 AEBP2Q6ZN18 517 aaPredicted RBP26.02■■□□□ 1.76
HERPUD2-201ENST00000311350 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.01■■□□□ 1.76
HERPUD2-201ENST00000311350 ARAP3Q8WWN8 1544 aa26.01■■□□□ 1.75
HERPUD2-201ENST00000311350 NEO1Q92859 1461 aa26■■□□□ 1.75
HERPUD2-201ENST00000311350 DENND4BO75064 1496 aaPredicted RBP25.99■■□□□ 1.75
HERPUD2-201ENST00000311350 TTC37Q6PGP7 1564 aa25.96■■□□□ 1.75
HERPUD2-201ENST00000311350 NBR1Q14596 966 aa25.96■■□□□ 1.75
HERPUD2-201ENST00000311350 TROQ12816 1431 aaPredicted RBP25.95■■□□□ 1.74
HERPUD2-201ENST00000311350 MYT1LQ9UL68 1186 aa25.93■■□□□ 1.74
HERPUD2-201ENST00000311350 B4GALNT3Q6L9W6 998 aa25.93■■□□□ 1.74
HERPUD2-201ENST00000311350 PPP4R2Q9NY27 417 aa25.92■■□□□ 1.74
HERPUD2-201ENST00000311350 ROCK1Q13464 1354 aa25.91■■□□□ 1.74
HERPUD2-201ENST00000311350 FANCAO15360 1455 aa25.91■■□□□ 1.74
HERPUD2-201ENST00000311350 PAK3O75914 559 aaPredicted RBP25.9■■□□□ 1.74
HERPUD2-201ENST00000311350 ANO8Q9HCE9 1232 aaPredicted RBP25.9■■□□□ 1.74
HERPUD2-201ENST00000311350 RAPGEF3O95398 923 aa25.89■■□□□ 1.73
HERPUD2-201ENST00000311350 PLCH2O75038 1416 aa25.88■■□□□ 1.73
HERPUD2-201ENST00000311350 KIF14Q15058 1648 aa25.88■■□□□ 1.73
HERPUD2-201ENST00000311350 KDM4FA0A1W2PPD8 638 aa25.88■■□□□ 1.73
HERPUD2-201ENST00000311350 HSPA5P11021 654 aaKnown RBP25.87■■□□□ 1.73
HERPUD2-201ENST00000311350 WASHC2AQ641Q2 1341 aa25.87■■□□□ 1.73
HERPUD2-201ENST00000311350 RRP7BPQ9NSQ0 103 aa25.87■■□□□ 1.73
HERPUD2-201ENST00000311350 CFAP74Q9C0B2 1584 aa25.86■■□□□ 1.73
HERPUD2-201ENST00000311350 EIF4G2P78344 907 aaKnown RBP eCLIP25.86■■□□□ 1.73
HERPUD2-201ENST00000311350 CNTLNQ9NXG0 1405 aa25.85■■□□□ 1.73
HERPUD2-201ENST00000311350 NOP58Q9Y2X3 529 aaKnown RBP25.84■■□□□ 1.73
HERPUD2-201ENST00000311350 MPHOSPH9Q99550 1183 aa25.83■■□□□ 1.73
HERPUD2-201ENST00000311350 CCDC184Q52MB2 194 aa25.83■■□□□ 1.73
HERPUD2-201ENST00000311350 ERICH6BQ5W0A0 696 aa25.82■■□□□ 1.72
HERPUD2-201ENST00000311350 NCOA1Q15788 1441 aa25.81■■□□□ 1.72
HERPUD2-201ENST00000311350 FRMPD1Q5SYB0 1578 aa25.8■■□□□ 1.72
HERPUD2-201ENST00000311350 RPRD2Q5VT52 1461 aaKnown RBP25.8■■□□□ 1.72
HERPUD2-201ENST00000311350 DNMT1P26358 1616 aaKnown RBP25.8■■□□□ 1.72
HERPUD2-201ENST00000311350 EFCAB2Q5VUJ9 269 aa25.79■■□□□ 1.72
HERPUD2-201ENST00000311350 DAPK1P53355 1430 aa25.79■■□□□ 1.72
HERPUD2-201ENST00000311350 ADGRL1O94910 1474 aa25.79■■□□□ 1.72
HERPUD2-201ENST00000311350 MYO5CQ9NQX4 1742 aa25.78■■□□□ 1.72
HERPUD2-201ENST00000311350 CHIC2Q9UKJ5 165 aa25.78■■□□□ 1.72
HERPUD2-201ENST00000311350 ANKRD30BQ9BXX2 1392 aa25.78■■□□□ 1.72
HERPUD2-201ENST00000311350 CCDC7Q96M83 1385 aa25.74■■□□□ 1.71
HERPUD2-201ENST00000311350 ARHGAP5Q13017 1502 aa25.74■■□□□ 1.71
HERPUD2-201ENST00000311350 SCAPERQ9BY12 1400 aa25.74■■□□□ 1.71
HERPUD2-201ENST00000311350 L3MBTL2Q969R5 705 aa25.73■■□□□ 1.71
HERPUD2-201ENST00000311350 RICTORQ6R327 1708 aa25.73■■□□□ 1.71
HERPUD2-201ENST00000311350 ABCC5O15440 1437 aa25.72■■□□□ 1.71
HERPUD2-201ENST00000311350 POLR1AO95602 1720 aaPredicted RBP25.7■■□□□ 1.7
HERPUD2-201ENST00000311350 SALL2Q9Y467 1007 aaPredicted RBP25.7■■□□□ 1.7
HERPUD2-201ENST00000311350 POGZQ7Z3K3 1410 aa25.69■■□□□ 1.7
HERPUD2-201ENST00000311350 FAM9BQ8IZU0 186 aa25.69■■□□□ 1.7
HERPUD2-201ENST00000311350 SPATA31E1Q6ZUB1 1445 aa25.68■■□□□ 1.7
HERPUD2-201ENST00000311350 ZMYM4Q5VZL5 1548 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms