RNA–Protein interactions for RNA: ENST00000310653.10

RAB6A-201, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene RAB6A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-201ENST00000310653 PLEKHD1A6NEE1 506 aa18.44■□□□□ 0.54
RAB6A-201ENST00000310653 EHBP1L1Q8N3D4 1523 aa18.43■□□□□ 0.54
RAB6A-201ENST00000310653 CCDC184Q52MB2 194 aa18.43■□□□□ 0.54
RAB6A-201ENST00000310653 SUPT16HQ9Y5B9 1047 aaKnown RBP18.42■□□□□ 0.54
RAB6A-201ENST00000310653 KIAA0586Q9BVV6 1533 aa18.42■□□□□ 0.54
RAB6A-201ENST00000310653 PKD2Q13563 968 aa18.39■□□□□ 0.54
RAB6A-201ENST00000310653 WDR62O43379 1518 aa18.39■□□□□ 0.53
RAB6A-201ENST00000310653 HECW1Q76N89 1606 aa18.38■□□□□ 0.53
RAB6A-201ENST00000310653 FKBP8Q14318 412 aa18.38■□□□□ 0.53
RAB6A-201ENST00000310653 DENND4BO75064 1496 aaPredicted RBP18.38■□□□□ 0.53
RAB6A-201ENST00000310653 WASHC2AQ641Q2 1341 aa18.38■□□□□ 0.53
RAB6A-201ENST00000310653 RGL3Q3MIN7 710 aa18.38■□□□□ 0.53
RAB6A-201ENST00000310653 ABCC5O15440 1437 aa18.37■□□□□ 0.53
RAB6A-201ENST00000310653 CEP170Q5SW79 1584 aa18.36■□□□□ 0.53
RAB6A-201ENST00000310653 FAM9BQ8IZU0 186 aa18.36■□□□□ 0.53
RAB6A-201ENST00000310653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.35■□□□□ 0.533e-11■■■□□ 17
RAB6A-201ENST00000310653 KIAA0556O60303 1618 aa18.34■□□□□ 0.53
RAB6A-201ENST00000310653 HNRNPUQ00839 825 aaKnown RBP eCLIP18.34■□□□□ 0.53
RAB6A-201ENST00000310653 DAPK1P53355 1430 aa18.34■□□□□ 0.53
RAB6A-201ENST00000310653 EIF4G2P78344 907 aaKnown RBP eCLIP18.33■□□□□ 0.53
RAB6A-201ENST00000310653 SYNJ2O15056 1496 aa18.3■□□□□ 0.52
RAB6A-201ENST00000310653 ARHGEF11O15085 1522 aa18.3■□□□□ 0.52
RAB6A-201ENST00000310653 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
RAB6A-201ENST00000310653 KIF14Q15058 1648 aa18.3■□□□□ 0.52
RAB6A-201ENST00000310653 TSPY4P0CV99 314 aa18.29■□□□□ 0.52
RAB6A-201ENST00000310653 TSPY10P0CW01 314 aa18.29■□□□□ 0.52
RAB6A-201ENST00000310653 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
RAB6A-201ENST00000310653 TIMELESSQ9UNS1 1208 aa18.28■□□□□ 0.52
RAB6A-201ENST00000310653 CARMIL2Q6F5E8 1435 aa18.28■□□□□ 0.52
RAB6A-201ENST00000310653 NUP155O75694 1391 aa18.26■□□□□ 0.51
RAB6A-201ENST00000310653 PTPRGP23470 1445 aa18.26■□□□□ 0.51
RAB6A-201ENST00000310653 RAPGEF6Q8TEU7 1601 aa18.26■□□□□ 0.51
RAB6A-201ENST00000310653 TROQ12816 1431 aaPredicted RBP18.25■□□□□ 0.51
RAB6A-201ENST00000310653 GPATCH8Q9UKJ3 1502 aaKnown RBP18.24■□□□□ 0.51
RAB6A-201ENST00000310653 DCAF11Q8TEB1 546 aa18.24■□□□□ 0.51
RAB6A-201ENST00000310653 CAMSAP2Q08AD1 1489 aa18.23■□□□□ 0.51
RAB6A-201ENST00000310653 MIA2Q96PC5 1412 aa18.22■□□□□ 0.51
RAB6A-201ENST00000310653 ATP10BO94823 1461 aa18.22■□□□□ 0.51
RAB6A-201ENST00000310653 ANKRD30BQ9BXX2 1392 aa18.21■□□□□ 0.51
RAB6A-201ENST00000310653 TCOF1Q13428 1488 aaKnown RBP18.21■□□□□ 0.51
RAB6A-201ENST00000310653 MAGI1Q96QZ7 1491 aaPredicted RBP18.21■□□□□ 0.51
RAB6A-201ENST00000310653 SALL2Q9Y467 1007 aaPredicted RBP18.2■□□□□ 0.5
RAB6A-201ENST00000310653 KDM5BQ9UGL1 1544 aa18.19■□□□□ 0.5
RAB6A-201ENST00000310653 NCOA1Q15788 1441 aa18.19■□□□□ 0.5
RAB6A-201ENST00000310653 MRS2Q9HD23 443 aa18.19■□□□□ 0.5
RAB6A-201ENST00000310653 ERCC6L2Q5T890 1561 aa18.16■□□□□ 0.5
RAB6A-201ENST00000310653 KIF7Q2M1P5 1343 aa18.16■□□□□ 0.5
RAB6A-201ENST00000310653 ANKRD50Q9ULJ7 1429 aa18.15■□□□□ 0.5
RAB6A-201ENST00000310653 CARD11Q9BXL7 1154 aa18.14■□□□□ 0.49
RAB6A-201ENST00000310653 AKNAQ7Z591 1439 aa18.14■□□□□ 0.49
RAB6A-201ENST00000310653 ANKRD30AQ9BXX3 1397 aa18.13■□□□□ 0.49
RAB6A-201ENST00000310653 NUP160Q12769 1436 aa18.13■□□□□ 0.49
RAB6A-201ENST00000310653 AFAP1Q8N556 730 aa18.11■□□□□ 0.49
RAB6A-201ENST00000310653 ST20-MTHFSA0A0A6YYL1 179 aa18.11■□□□□ 0.49
RAB6A-201ENST00000310653 KIF15Q9NS87 1388 aa18.11■□□□□ 0.49
RAB6A-201ENST00000310653 NBPF1Q3BBV0 1214 aa18.1■□□□□ 0.49
RAB6A-201ENST00000310653 NEFLP07196 543 aa18.1■□□□□ 0.49
RAB6A-201ENST00000310653 PZPP20742 1482 aa18.09■□□□□ 0.49
RAB6A-201ENST00000310653 C9orf84Q5VXU9 1444 aa18.09■□□□□ 0.49
RAB6A-201ENST00000310653 PRKRIP1Q9H875 184 aaPredicted RBP18.08■□□□□ 0.49
RAB6A-201ENST00000310653 CCDC7Q96M83 1385 aa18.08■□□□□ 0.48
RAB6A-201ENST00000310653 MYT1Q01538 1121 aa18.07■□□□□ 0.48
RAB6A-201ENST00000310653 CCER2I3L3R5 266 aa18.07■□□□□ 0.48
RAB6A-201ENST00000310653 DNMT1P26358 1616 aaKnown RBP18.06■□□□□ 0.48
RAB6A-201ENST00000310653 ROCK1Q13464 1354 aa18.05■□□□□ 0.48
RAB6A-201ENST00000310653 RPRD2Q5VT52 1461 aaKnown RBP18.05■□□□□ 0.48
RAB6A-201ENST00000310653 GCC2Q8IWJ2 1684 aa18.04■□□□□ 0.48
RAB6A-201ENST00000310653 USP47Q96K76 1375 aa18.04■□□□□ 0.48
RAB6A-201ENST00000310653 TSHZ2Q9NRE2 1034 aa18.01■□□□□ 0.47
RAB6A-201ENST00000310653 TEX14Q8IWB6 1497 aa18■□□□□ 0.47
RAB6A-201ENST00000310653 KIAA1107Q9UPP5 1409 aa18■□□□□ 0.47
RAB6A-201ENST00000310653 ARHGAP5Q13017 1502 aa17.97■□□□□ 0.47
RAB6A-201ENST00000310653 CC2D1BQ5T0F9 858 aaKnown RBP17.97■□□□□ 0.47
RAB6A-201ENST00000310653 ABCC10Q5T3U5 1492 aa17.96■□□□□ 0.47
RAB6A-201ENST00000310653 CHD1O14646 1710 aa17.96■□□□□ 0.47
RAB6A-201ENST00000310653 CNTLNQ9NXG0 1405 aa17.96■□□□□ 0.46
RAB6A-201ENST00000310653 ABCA8O94911 1581 aa17.95■□□□□ 0.46
RAB6A-201ENST00000310653 CDC42BPAQ5VT25 1732 aa17.94■□□□□ 0.46
RAB6A-201ENST00000310653 PLEKHH2Q8IVE3 1493 aa17.94■□□□□ 0.46
RAB6A-201ENST00000310653 SYCP2Q9BX26 1530 aa17.94■□□□□ 0.46
RAB6A-201ENST00000310653 ROCK2O75116 1388 aaKnown RBP17.93■□□□□ 0.46
RAB6A-201ENST00000310653 CHGAP10645 457 aaKnown RBP17.93■□□□□ 0.46
RAB6A-201ENST00000310653 NUTM2DQ5VT03 806 aaPredicted RBP17.92■□□□□ 0.46
RAB6A-201ENST00000310653 B4GALNT3Q6L9W6 998 aa17.92■□□□□ 0.46
RAB6A-201ENST00000310653 TMC1Q8TDI8 760 aa17.91■□□□□ 0.46
RAB6A-201ENST00000310653 MBD5Q9P267 1494 aa17.9■□□□□ 0.46
RAB6A-201ENST00000310653 KIF3BO15066 747 aa17.89■□□□□ 0.45
RAB6A-201ENST00000310653 TTC37Q6PGP7 1564 aa17.88■□□□□ 0.45
RAB6A-201ENST00000310653 EFCAB2Q5VUJ9 269 aa17.88■□□□□ 0.45
RAB6A-201ENST00000310653 SPATA31E1Q6ZUB1 1445 aa17.87■□□□□ 0.45
RAB6A-201ENST00000310653 TRAPPC8Q9Y2L5 1435 aa17.86■□□□□ 0.45
RAB6A-201ENST00000310653 SAMD9LQ8IVG5 1584 aa17.86■□□□□ 0.45
RAB6A-201ENST00000310653 ARHGEF12Q9NZN5 1544 aa17.85■□□□□ 0.45
RAB6A-201ENST00000310653 CCDC144AA2RUR9 1427 aa17.85■□□□□ 0.45
RAB6A-201ENST00000310653 ITSN2Q9NZM3 1697 aa17.85■□□□□ 0.45
RAB6A-201ENST00000310653 SPAG9O60271 1321 aaKnown RBP17.85■□□□□ 0.45
RAB6A-201ENST00000310653 CCDC141Q6ZP82 1450 aa17.84■□□□□ 0.45
RAB6A-201ENST00000310653 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.83■□□□□ 0.44
RAB6A-201ENST00000310653 GGT6Q6P531 493 aa17.83■□□□□ 0.44
RAB6A-201ENST00000310653 BCORL1Q5H9F3 1711 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms