RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 MPHOSPH9Q99550 1183 aa23.57■■□□□ 1.36
ATP2A2-201ENST00000308664 FRAT1Q92837 279 aaPredicted RBP23.57■■□□□ 1.36
ATP2A2-201ENST00000308664 U2SURPO15042 1029 aaKnown RBP23.55■■□□□ 1.36
ATP2A2-201ENST00000308664 NUP155O75694 1391 aa23.55■■□□□ 1.36
ATP2A2-201ENST00000308664 KIF3BO15066 747 aa23.54■■□□□ 1.36
ATP2A2-201ENST00000308664 NCLP19338 710 aaKnown RBP23.53■■□□□ 1.36
ATP2A2-201ENST00000308664 SRPK2P78362 688 aaKnown RBP23.52■■□□□ 1.36
ATP2A2-201ENST00000308664 FMN1Q68DA7 1419 aa23.52■■□□□ 1.36
ATP2A2-201ENST00000308664 RCAN3Q9UKA8 241 aa23.52■■□□□ 1.36
ATP2A2-201ENST00000308664 NUTM2DQ5VT03 806 aaPredicted RBP23.51■■□□□ 1.35
ATP2A2-201ENST00000308664 TCERG1O14776 1098 aaKnown RBP23.5■■□□□ 1.35
ATP2A2-201ENST00000308664 NUDCQ9Y266 331 aa23.5■■□□□ 1.35
ATP2A2-201ENST00000308664 FANCIQ9NVI1 1328 aa23.5■■□□□ 1.35
ATP2A2-201ENST00000308664 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
ATP2A2-201ENST00000308664 TMF1P82094 1093 aa23.49■■□□□ 1.35
ATP2A2-201ENST00000308664 GOLGA6L22H0YM25 854 aa23.48■■□□□ 1.35
ATP2A2-201ENST00000308664 FANCD2Q9BXW9 1451 aa23.47■■□□□ 1.35
ATP2A2-201ENST00000308664 KANK1Q14678 1352 aa23.47■■□□□ 1.35
ATP2A2-201ENST00000308664 SPRYD3Q8NCJ5 442 aa23.46■■□□□ 1.35
ATP2A2-201ENST00000308664 L3MBTL2Q969R5 705 aa23.45■■□□□ 1.34
ATP2A2-201ENST00000308664 CYB5RLQ6IPT4 315 aa23.44■■□□□ 1.34
ATP2A2-201ENST00000308664 FTSJ3Q8IY81 847 aaKnown RBP23.44■■□□□ 1.34
ATP2A2-201ENST00000308664 MYH16Q9H6N6 1097 aa23.43■■□□□ 1.34
ATP2A2-201ENST00000308664 MAPK8IP3Q9UPT6 1336 aa23.43■■□□□ 1.34
ATP2A2-201ENST00000308664 SLKQ9H2G2 1235 aaPredicted RBP23.41■■□□□ 1.34
ATP2A2-201ENST00000308664 PRKRIP1Q9H875 184 aaPredicted RBP23.36■■□□□ 1.33
ATP2A2-201ENST00000308664 SPAG9O60271 1321 aaKnown RBP23.35■■□□□ 1.33
ATP2A2-201ENST00000308664 RAD54L2Q9Y4B4 1467 aa23.35■■□□□ 1.33
ATP2A2-201ENST00000308664 ANKRD30AQ9BXX3 1397 aa23.35■■□□□ 1.33
ATP2A2-201ENST00000308664 GZF1Q9H116 711 aaPredicted RBP23.34■■□□□ 1.33
ATP2A2-201ENST00000308664 PTMAP06454 111 aaKnown RBP23.34■■□□□ 1.33
ATP2A2-201ENST00000308664 MORC1Q86VD1 984 aa23.33■■□□□ 1.33
ATP2A2-201ENST00000308664 TPRNQ4KMQ1 711 aa23.33■■□□□ 1.33
ATP2A2-201ENST00000308664 SLC4A3P48751 1232 aa23.33■■□□□ 1.32
ATP2A2-201ENST00000308664 L1TD1Q5T7N2 865 aaKnown RBP23.33■■□□□ 1.32
ATP2A2-201ENST00000308664 IGF1RP08069 1367 aa23.32■■□□□ 1.32
ATP2A2-201ENST00000308664 DNTTIP2Q5QJE6 756 aaKnown RBP23.31■■□□□ 1.32
ATP2A2-201ENST00000308664 NUTM2FA1L443 756 aa23.31■■□□□ 1.32
ATP2A2-201ENST00000308664 PDE4AP27815 886 aa23.29■■□□□ 1.32
ATP2A2-201ENST00000308664 WASHC2CQ9Y4E1 1318 aa23.29■■□□□ 1.32
ATP2A2-201ENST00000308664 HSP90AB1P08238 724 aaKnown RBP23.29■■□□□ 1.32
ATP2A2-201ENST00000308664 ZBED9Q6R2W3 1325 aa23.27■■□□□ 1.31
ATP2A2-201ENST00000308664 ROCK2O75116 1388 aaKnown RBP23.27■■□□□ 1.31
ATP2A2-201ENST00000308664 EXOC6Q8TAG9 804 aa23.26■■□□□ 1.31
ATP2A2-201ENST00000308664 KTN1Q86UP2 1357 aaKnown RBP23.26■■□□□ 1.31
ATP2A2-201ENST00000308664 PTPRGP23470 1445 aa23.25■■□□□ 1.31
ATP2A2-201ENST00000308664 ZNF644Q9H582 1327 aaPredicted RBP23.25■■□□□ 1.31
ATP2A2-201ENST00000308664 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
ATP2A2-201ENST00000308664 HDGFP51858 240 aaKnown RBP23.24■■□□□ 1.31
ATP2A2-201ENST00000308664 PNNQ9H307 717 aaKnown RBP23.24■■□□□ 1.31
ATP2A2-201ENST00000308664 PAK3O75914 559 aaPredicted RBP23.24■■□□□ 1.31
ATP2A2-201ENST00000308664 RALBP1Q15311 655 aa23.23■■□□□ 1.31
ATP2A2-201ENST00000308664 HSCBQ8IWL3 235 aa23.23■■□□□ 1.31
ATP2A2-201ENST00000308664 USP35Q9P2H5 1018 aa23.23■■□□□ 1.31
ATP2A2-201ENST00000308664 PLIN1O60240 522 aa23.22■■□□□ 1.31
ATP2A2-201ENST00000308664 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.316e-7■■■■■ 48.7
ATP2A2-201ENST00000308664 TRAK1Q9UPV9 953 aa23.2■■□□□ 1.31
ATP2A2-201ENST00000308664 U2AF1L5P0DN76 240 aaPredicted RBP23.18■■□□□ 1.3
ATP2A2-201ENST00000308664 U2AF1Q01081 240 aaKnown RBP eCLIP23.18■■□□□ 1.3
ATP2A2-201ENST00000308664 GSE1Q14687 1217 aa23.18■■□□□ 1.3
ATP2A2-201ENST00000308664 NLRP13Q86W25 1043 aa23.17■■□□□ 1.3
ATP2A2-201ENST00000308664 CCDC18Q5T9S5 1454 aa23.17■■□□□ 1.3
ATP2A2-201ENST00000308664 PLCB2Q00722 1185 aa23.17■■□□□ 1.3
ATP2A2-201ENST00000308664 OSCARQ8IYS5 282 aa23.17■■□□□ 1.3
ATP2A2-201ENST00000308664 ST20-MTHFSA0A0A6YYL1 179 aa23.16■■□□□ 1.3
ATP2A2-201ENST00000308664 GAPVD1Q14C86 1478 aa23.16■■□□□ 1.3
ATP2A2-201ENST00000308664 RRP1P56182 461 aaKnown RBP23.13■■□□□ 1.29
ATP2A2-201ENST00000308664 DNAJC5BQ9UF47 199 aa23.13■■□□□ 1.29
ATP2A2-201ENST00000308664 PDE3BQ13370 1112 aa23.12■■□□□ 1.29
ATP2A2-201ENST00000308664 RSPH4AQ5TD94 716 aa23.12■■□□□ 1.29
ATP2A2-201ENST00000308664 HDGFL2Q7Z4V5 671 aaPredicted RBP23.11■■□□□ 1.29
ATP2A2-201ENST00000308664 MSNP26038 577 aaKnown RBP23.11■■□□□ 1.29
ATP2A2-201ENST00000308664 GOLGA6L3A6NEY3 463 aa23.08■■□□□ 1.29
ATP2A2-201ENST00000308664 GOLGA2Q08379 1002 aa23.08■■□□□ 1.29
ATP2A2-201ENST00000308664 NESP48681 1621 aa23.08■■□□□ 1.29
ATP2A2-201ENST00000308664 NCAPD3P42695 1498 aa23.08■■□□□ 1.29
ATP2A2-201ENST00000308664 MS4A1P11836 297 aa23.08■■□□□ 1.28
ATP2A2-201ENST00000308664 CASC1Q6TDU7 716 aa23.07■■□□□ 1.28
ATP2A2-201ENST00000308664 CLUAP1Q96AJ1 413 aa23.07■■□□□ 1.28
ATP2A2-201ENST00000308664 ARID3AQ99856 593 aa23.07■■□□□ 1.28
ATP2A2-201ENST00000308664 CRBNQ96SW2 442 aa23.06■■□□□ 1.28
ATP2A2-201ENST00000308664 TAOK2Q9UL54 1235 aa23.06■■□□□ 1.28
ATP2A2-201ENST00000308664 CCDC146Q8IYE0 955 aa23.05■■□□□ 1.28
ATP2A2-201ENST00000308664 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.05■■□□□ 1.28
ATP2A2-201ENST00000308664 MFAP1P55081 439 aaKnown RBP23.04■■□□□ 1.28
ATP2A2-201ENST00000308664 APBB1O00213 710 aa23.04■■□□□ 1.28
ATP2A2-201ENST00000308664 FAM161AQ3B820 660 aa23.02■■□□□ 1.28
ATP2A2-201ENST00000308664 ANO8Q9HCE9 1232 aaPredicted RBP23.02■■□□□ 1.28
ATP2A2-201ENST00000308664 MYBBP1AQ9BQG0 1328 aaKnown RBP23.02■■□□□ 1.28
ATP2A2-201ENST00000308664 MSH5O43196 834 aa23.01■■□□□ 1.27
ATP2A2-201ENST00000308664 WASHC2AQ641Q2 1341 aa23.01■■□□□ 1.27
ATP2A2-201ENST00000308664 RWDD1Q9H446 243 aaPredicted RBP23■■□□□ 1.27
ATP2A2-201ENST00000308664 IL27Q8NEV9 243 aa23■■□□□ 1.27
ATP2A2-201ENST00000308664 OS9Q13438 667 aaPredicted RBP23■■□□□ 1.27
ATP2A2-201ENST00000308664 NPHP1O15259 732 aa22.99■■□□□ 1.27
ATP2A2-201ENST00000308664 GBP4Q96PP9 640 aa22.99■■□□□ 1.27
ATP2A2-201ENST00000308664 RTF1Q92541 710 aaKnown RBP22.98■■□□□ 1.27
ATP2A2-201ENST00000308664 LTV1Q96GA3 475 aaPredicted RBP22.98■■□□□ 1.27
ATP2A2-201ENST00000308664 NGDNQ8NEJ9 315 aaKnown RBP22.98■■□□□ 1.27
ATP2A2-201ENST00000308664 CENPQQ7L2Z9 268 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms