RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 KIAA0556O60303 1618 aa29.1■■■□□ 2.25
RELA-201ENST00000308639 ABCC5O15440 1437 aa29.09■■■□□ 2.25
RELA-201ENST00000308639 NBPF8Q3BBV2 869 aa29.08■■■□□ 2.25
RELA-201ENST00000308639 CCDC184Q52MB2 194 aa29.08■■■□□ 2.25
RELA-201ENST00000308639 IFT140Q96RY7 1462 aa29.06■■■□□ 2.24
RELA-201ENST00000308639 KIAA0586Q9BVV6 1533 aa29.06■■■□□ 2.24
RELA-201ENST00000308639 SLC4A1APQ9BWU0 796 aaKnown RBP29.03■■■□□ 2.24
RELA-201ENST00000308639 PRG4Q92954 1404 aaPredicted RBP29.03■■■□□ 2.24
RELA-201ENST00000308639 ANKRD30BQ9BXX2 1392 aa29.02■■■□□ 2.24
RELA-201ENST00000308639 IRX6P78412 446 aaPredicted RBP29.01■■■□□ 2.23
RELA-201ENST00000308639 BCL11AQ9H165 835 aa29.01■■■□□ 2.23
RELA-201ENST00000308639 RAPGEF6Q8TEU7 1601 aa29■■■□□ 2.23
RELA-201ENST00000308639 GRIN2AQ12879 1464 aa29■■■□□ 2.23
RELA-201ENST00000308639 ZNF777Q9ULD5 760 aaPredicted RBP29■■■□□ 2.23
RELA-201ENST00000308639 DNMT1P26358 1616 aaKnown RBP29■■■□□ 2.23
RELA-201ENST00000308639 FBLN2P98095 1184 aa28.99■■■□□ 2.23
RELA-201ENST00000308639 EIF4G3O43432 1585 aaKnown RBP28.97■■■□□ 2.23
RELA-201ENST00000308639 ROCK1Q13464 1354 aa28.97■■■□□ 2.23
RELA-201ENST00000308639 PLB1Q6P1J6 1458 aa28.96■■■□□ 2.23
RELA-201ENST00000308639 RPRD2Q5VT52 1461 aaKnown RBP28.95■■■□□ 2.23
RELA-201ENST00000308639 CNTLNQ9NXG0 1405 aa28.95■■■□□ 2.22
RELA-201ENST00000308639 CDK11AQ9UQ88 783 aaPredicted RBP28.93■■■□□ 2.22
RELA-201ENST00000308639 CCDC7Q96M83 1385 aa28.93■■■□□ 2.22
RELA-201ENST00000308639 TEX14Q8IWB6 1497 aa28.93■■■□□ 2.22
RELA-201ENST00000308639 CFDP1Q9UEE9 299 aaPredicted RBP28.93■■■□□ 2.22
RELA-201ENST00000308639 CHMP7Q8WUX9 453 aaPredicted RBP28.91■■■□□ 2.22
RELA-201ENST00000308639 NCOA1Q15788 1441 aa28.91■■■□□ 2.22
RELA-201ENST00000308639 CNGB1Q14028 1251 aaPredicted RBP28.89■■■□□ 2.22
RELA-201ENST00000308639 ANP32EQ9BTT0 268 aa28.89■■■□□ 2.22
RELA-201ENST00000308639 CAMSAP2Q08AD1 1489 aa28.89■■■□□ 2.21
RELA-201ENST00000308639 FAM9BQ8IZU0 186 aa28.88■■■□□ 2.21
RELA-201ENST00000308639 KIF14Q15058 1648 aa28.87■■■□□ 2.21
RELA-201ENST00000308639 PRKRIP1Q9H875 184 aaPredicted RBP28.87■■■□□ 2.21
RELA-201ENST00000308639 TROQ12816 1431 aaPredicted RBP28.86■■■□□ 2.21
RELA-201ENST00000308639 ZNF326Q5BKZ1 582 aaKnown RBP28.86■■■□□ 2.21
RELA-201ENST00000308639 CEP170Q5SW79 1584 aa28.85■■■□□ 2.21
RELA-201ENST00000308639 PZPP20742 1482 aa28.85■■■□□ 2.21
RELA-201ENST00000308639 KIF7Q2M1P5 1343 aa28.85■■■□□ 2.21
RELA-201ENST00000308639 ERCC6Q03468 1493 aa28.83■■■□□ 2.21
RELA-201ENST00000308639 GPATCH8Q9UKJ3 1502 aaKnown RBP28.83■■■□□ 2.21
RELA-201ENST00000308639 MRS2Q9HD23 443 aa28.81■■■□□ 2.2
RELA-201ENST00000308639 POLR3GLQ9BT43 218 aa28.8■■■□□ 2.2
RELA-201ENST00000308639 SPATA31E1Q6ZUB1 1445 aa28.79■■■□□ 2.2
RELA-201ENST00000308639 RBM19Q9Y4C8 960 aaKnown RBP28.78■■■□□ 2.2
RELA-201ENST00000308639 PKD2Q13563 968 aa28.77■■■□□ 2.2
RELA-201ENST00000308639 JPH4Q96JJ6 628 aa28.76■■■□□ 2.19
RELA-201ENST00000308639 SYNJ2O15056 1496 aa28.72■■■□□ 2.19
RELA-201ENST00000308639 MAGI1Q96QZ7 1491 aaPredicted RBP28.71■■■□□ 2.19
RELA-201ENST00000308639 ITSN2Q9NZM3 1697 aa28.7■■■□□ 2.19
RELA-201ENST00000308639 ADGBQ8N7X0 1667 aa28.68■■■□□ 2.18
RELA-201ENST00000308639 KIAA1107Q9UPP5 1409 aa28.68■■■□□ 2.18
RELA-201ENST00000308639 SENP3-EIF4A1A0A087X0R7 540 aa28.68■■■□□ 2.18
RELA-201ENST00000308639 ANKRD30AQ9BXX3 1397 aa28.65■■■□□ 2.18
RELA-201ENST00000308639 CARMIL2Q6F5E8 1435 aa28.65■■■□□ 2.18
RELA-201ENST00000308639 ANKRD50Q9ULJ7 1429 aa28.64■■■□□ 2.18
RELA-201ENST00000308639 CROCC2H7BZ55 1655 aa28.64■■■□□ 2.18
RELA-201ENST00000308639 USP47Q96K76 1375 aa28.64■■■□□ 2.17
RELA-201ENST00000308639 PLEKHD1A6NEE1 506 aa28.63■■■□□ 2.17
RELA-201ENST00000308639 MBD5Q9P267 1494 aa28.63■■■□□ 2.17
RELA-201ENST00000308639 ADCY10Q96PN6 1610 aa28.63■■■□□ 2.17
RELA-201ENST00000308639 BCORL1Q5H9F3 1711 aa28.63■■■□□ 2.17
RELA-201ENST00000308639 ADGRL2O95490 1459 aa28.62■■■□□ 2.17
RELA-201ENST00000308639 NUP155O75694 1391 aa28.6■■■□□ 2.17
RELA-201ENST00000308639 NUP160Q12769 1436 aa28.59■■■□□ 2.17
RELA-201ENST00000308639 POLR1AO95602 1720 aaPredicted RBP28.59■■■□□ 2.17
RELA-201ENST00000308639 CDC42BPAQ5VT25 1732 aa28.59■■■□□ 2.17
RELA-201ENST00000308639 HNRNPMP52272 730 aaKnown RBP eCLIP28.58■■■□□ 2.17
RELA-201ENST00000308639 KDM2AQ9Y2K7 1162 aa28.57■■■□□ 2.16
RELA-201ENST00000308639 ATP10BO94823 1461 aa28.57■■■□□ 2.16
RELA-201ENST00000308639 DHX29Q7Z478 1369 aaKnown RBP28.56■■■□□ 2.16
RELA-201ENST00000308639 ZBED9Q6R2W3 1325 aa28.56■■■□□ 2.16
RELA-201ENST00000308639 C9orf84Q5VXU9 1444 aa28.55■■■□□ 2.16
RELA-201ENST00000308639 ABCC10Q5T3U5 1492 aa28.54■■■□□ 2.16
RELA-201ENST00000308639 ABCA8O94911 1581 aa28.51■■■□□ 2.16
RELA-201ENST00000308639 B4GALNT3Q6L9W6 998 aa28.5■■■□□ 2.15
RELA-201ENST00000308639 TSPY4P0CV99 314 aa28.49■■■□□ 2.15
RELA-201ENST00000308639 TSPY10P0CW01 314 aa28.49■■■□□ 2.15
RELA-201ENST00000308639 KDM5CP41229 1560 aa28.49■■■□□ 2.15
RELA-201ENST00000308639 CARD11Q9BXL7 1154 aa28.48■■■□□ 2.15
RELA-201ENST00000308639 PPP4R2Q9NY27 417 aa28.46■■■□□ 2.15
RELA-201ENST00000308639 KIF15Q9NS87 1388 aa28.45■■■□□ 2.14
RELA-201ENST00000308639 DCAF11Q8TEB1 546 aa28.45■■■□□ 2.14
RELA-201ENST00000308639 MSH5O43196 834 aa28.44■■■□□ 2.14
RELA-201ENST00000308639 ST20-MTHFSA0A0A6YYL1 179 aa28.42■■■□□ 2.14
RELA-201ENST00000308639 SHANK2Q9UPX8 1470 aa28.39■■■□□ 2.14
RELA-201ENST00000308639 RALGAPBQ86X10 1494 aa28.38■■■□□ 2.13
RELA-201ENST00000308639 UHRF1BP1Q6BDS2 1440 aa28.37■■■□□ 2.13
RELA-201ENST00000308639 PTPRGP23470 1445 aa28.36■■■□□ 2.13
RELA-201ENST00000308639 RGL3Q3MIN7 710 aa28.33■■■□□ 2.13
RELA-201ENST00000308639 ERICH6BQ5W0A0 696 aa28.33■■■□□ 2.13
RELA-201ENST00000308639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.31■■■□□ 2.124e-9■□□□□ 9.5
RELA-201ENST00000308639 SAMD9LQ8IVG5 1584 aa28.31■■■□□ 2.12
RELA-201ENST00000308639 TMC1Q8TDI8 760 aa28.3■■■□□ 2.12
RELA-201ENST00000308639 PNISRQ8TF01 805 aaKnown RBP28.3■■■□□ 2.12
RELA-201ENST00000308639 KDM5DQ9BY66 1539 aa28.29■■■□□ 2.12
RELA-201ENST00000308639 CDC42BPBQ9Y5S2 1711 aa28.29■■■□□ 2.12
RELA-201ENST00000308639 ARHGEF12Q9NZN5 1544 aa28.27■■■□□ 2.12
RELA-201ENST00000308639 ROCK2O75116 1388 aaKnown RBP28.27■■■□□ 2.12
RELA-201ENST00000308639 ARID4BQ4LE39 1312 aaPredicted RBP28.26■■■□□ 2.11
RELA-201ENST00000308639 SMG6Q86US8 1419 aaKnown RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms