RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 CDC42BPAQ5VT25 1732 aa34.62■■■■□ 3.13
SNUPN-201ENST00000308588 PREX2Q70Z35 1606 aa34.62■■■■□ 3.13
SNUPN-201ENST00000308588 AKNAQ7Z591 1439 aa34.61■■■■□ 3.13
SNUPN-201ENST00000308588 CDC42BPBQ9Y5S2 1711 aa34.61■■■■□ 3.13
SNUPN-201ENST00000308588 CCNB3Q8WWL7 1395 aa34.61■■■■□ 3.13
SNUPN-201ENST00000308588 ARHGAP5Q13017 1502 aa34.6■■■■□ 3.13
SNUPN-201ENST00000308588 CFAP74Q9C0B2 1584 aa34.6■■■■□ 3.13
SNUPN-201ENST00000308588 CFDP1Q9UEE9 299 aaPredicted RBP34.51■■■■□ 3.12
SNUPN-201ENST00000308588 ADGRL1O94910 1474 aa34.5■■■■□ 3.11
SNUPN-201ENST00000308588 RAPGEF3O95398 923 aa34.49■■■■□ 3.11
SNUPN-201ENST00000308588 SCAPERQ9BY12 1400 aa34.47■■■■□ 3.11
SNUPN-201ENST00000308588 DENND4BO75064 1496 aaPredicted RBP34.46■■■■□ 3.11
SNUPN-201ENST00000308588 ITSN2Q9NZM3 1697 aa34.46■■■■□ 3.11
SNUPN-201ENST00000308588 ZNF777Q9ULD5 760 aaPredicted RBP34.45■■■■□ 3.11
SNUPN-201ENST00000308588 SAMD9LQ8IVG5 1584 aa34.42■■■■□ 3.1
SNUPN-201ENST00000308588 FRMPD1Q5SYB0 1578 aa34.41■■■■□ 3.1
SNUPN-201ENST00000308588 ABCC1P33527 1531 aa34.39■■■■□ 3.1
SNUPN-201ENST00000308588 ARHGEF12Q9NZN5 1544 aa34.38■■■■□ 3.09
SNUPN-201ENST00000308588 RICTORQ6R327 1708 aa34.38■■■■□ 3.09
SNUPN-201ENST00000308588 ZNF644Q9H582 1327 aaPredicted RBP34.38■■■■□ 3.09
SNUPN-201ENST00000308588 MYOM3Q5VTT5 1437 aa34.37■■■■□ 3.09
SNUPN-201ENST00000308588 POGZQ7Z3K3 1410 aa34.37■■■■□ 3.09
SNUPN-201ENST00000308588 PPARGC1BQ86YN6 1023 aaKnown RBP34.35■■■■□ 3.09
SNUPN-201ENST00000308588 KIAA1107Q9UPP5 1409 aa34.33■■■■□ 3.09
SNUPN-201ENST00000308588 PLEKHH2Q8IVE3 1493 aa34.32■■■■□ 3.08
SNUPN-201ENST00000308588 TRAPPC8Q9Y2L5 1435 aa34.31■■■■□ 3.08
SNUPN-201ENST00000308588 HNRNPMP52272 730 aaKnown RBP eCLIP34.31■■■■□ 3.08
SNUPN-201ENST00000308588 AFAP1Q8N556 730 aa34.31■■■■□ 3.08
SNUPN-201ENST00000308588 SYCP2Q9BX26 1530 aa34.3■■■■□ 3.08
SNUPN-201ENST00000308588 MIA2Q96PC5 1412 aa34.3■■■■□ 3.08
SNUPN-201ENST00000308588 ZNF518AQ6AHZ1 1483 aa34.29■■■■□ 3.08
SNUPN-201ENST00000308588 ZMYM4Q5VZL5 1548 aa34.27■■■■□ 3.08
SNUPN-201ENST00000308588 CAMSAP2Q08AD1 1489 aa34.26■■■■□ 3.08
SNUPN-201ENST00000308588 MBD5Q9P267 1494 aa34.23■■■■□ 3.07
SNUPN-201ENST00000308588 KDM5CP41229 1560 aa34.23■■■■□ 3.07
SNUPN-201ENST00000308588 FGD6Q6ZV73 1430 aa34.22■■■■□ 3.07
SNUPN-201ENST00000308588 MAGI2Q86UL8 1455 aa34.19■■■■□ 3.06
SNUPN-201ENST00000308588 YEATS2Q9ULM3 1422 aa34.16■■■■□ 3.06
SNUPN-201ENST00000308588 PTPN23Q9H3S7 1636 aa34.14■■■■□ 3.06
SNUPN-201ENST00000308588 MLH3Q9UHC1 1453 aa34.14■■■■□ 3.06
SNUPN-201ENST00000308588 ZFYVE16Q7Z3T8 1539 aa34.13■■■■□ 3.05
SNUPN-201ENST00000308588 RSPH4AQ5TD94 716 aa34.12■■■■□ 3.05
SNUPN-201ENST00000308588 TCOF1Q13428 1488 aaKnown RBP34.12■■■■□ 3.05
SNUPN-201ENST00000308588 ARHGEF40Q8TER5 1519 aa34.12■■■■□ 3.05
SNUPN-201ENST00000308588 HECW2Q9P2P5 1572 aa34.12■■■■□ 3.05
SNUPN-201ENST00000308588 ARHGEF5Q12774 1597 aa34.1■■■■□ 3.05
SNUPN-201ENST00000308588 SPAG9O60271 1321 aaKnown RBP34.1■■■■□ 3.05
SNUPN-201ENST00000308588 CCDC141Q6ZP82 1450 aa34.09■■■■□ 3.05
SNUPN-201ENST00000308588 MYT1LQ9UL68 1186 aa34.09■■■■□ 3.05
SNUPN-201ENST00000308588 KIDINS220Q9ULH0 1771 aa34.06■■■■□ 3.04
SNUPN-201ENST00000308588 ATP10AO60312 1499 aa34.02■■■■□ 3.04
SNUPN-201ENST00000308588 INO80Q9ULG1 1556 aaPredicted RBP34.02■■■■□ 3.04
SNUPN-201ENST00000308588 ATP7AQ04656 1500 aa34.01■■■■□ 3.03
SNUPN-201ENST00000308588 DIP2CQ9Y2E4 1556 aa34■■■■□ 3.03
SNUPN-201ENST00000308588 FAM50AQ14320 339 aaKnown RBP34■■■■□ 3.03
SNUPN-201ENST00000308588 ABCA6Q8N139 1617 aa33.99■■■■□ 3.03
SNUPN-201ENST00000308588 RTEL1-TNFRSF6BF6WH68 1400 aa33.99■■■■□ 3.03
SNUPN-201ENST00000308588 TSPY4P0CV99 314 aa33.99■■■■□ 3.03
SNUPN-201ENST00000308588 TSPY10P0CW01 314 aa33.99■■■■□ 3.03
SNUPN-201ENST00000308588 ABCC5O15440 1437 aa33.98■■■■□ 3.03
SNUPN-201ENST00000308588 C9orf84Q5VXU9 1444 aa33.95■■■■□ 3.03
SNUPN-201ENST00000308588 DNMT1P26358 1616 aaKnown RBP33.93■■■■□ 3.02
SNUPN-201ENST00000308588 DAPK1P53355 1430 aa33.93■■■■□ 3.02
SNUPN-201ENST00000308588 SIGLEC1Q9BZZ2 1709 aa33.92■■■■□ 3.02
SNUPN-201ENST00000308588 RRBP1Q9P2E9 1410 aaKnown RBP33.91■■■■□ 3.02
SNUPN-201ENST00000308588 MAST1Q9Y2H9 1570 aa33.91■■■■□ 3.02
SNUPN-201ENST00000308588 REREQ9P2R6 1566 aa33.89■■■■□ 3.02
SNUPN-201ENST00000308588 ARID4BQ4LE39 1312 aaPredicted RBP33.89■■■■□ 3.02
SNUPN-201ENST00000308588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.88■■■■□ 3.013e-7■■□□□ 11.7
SNUPN-201ENST00000308588 CROCC2H7BZ55 1655 aa33.87■■■■□ 3.01
SNUPN-201ENST00000308588 SHANK2Q9UPX8 1470 aa33.87■■■■□ 3.01
SNUPN-201ENST00000308588 A2MP01023 1474 aa33.83■■■■□ 3.01
SNUPN-201ENST00000308588 KDM4FA0A1W2PPD8 638 aa33.83■■■■□ 3.01
SNUPN-201ENST00000308588 ADGBQ8N7X0 1667 aa33.81■■■■□ 3
SNUPN-201ENST00000308588 CHIC2Q9UKJ5 165 aa33.79■■■■□ 3
SNUPN-201ENST00000308588 AGLP35573 1532 aa33.79■■■■□ 3
SNUPN-201ENST00000308588 PLXNC1O60486 1568 aa33.79■■■■□ 3
SNUPN-201ENST00000308588 PTPRKQ15262 1439 aa33.78■■■■□ 3
SNUPN-201ENST00000308588 DHX29Q7Z478 1369 aaKnown RBP33.78■■■■□ 3
SNUPN-201ENST00000308588 BCORL1Q5H9F3 1711 aa33.77■■■■□ 3
SNUPN-201ENST00000308588 MLECQ14165 292 aa33.74■■■□□ 2.99
SNUPN-201ENST00000308588 ITGAEP38570 1179 aa33.72■■■□□ 2.99
SNUPN-201ENST00000308588 RRP7BPQ9NSQ0 103 aa33.72■■■□□ 2.99
SNUPN-201ENST00000308588 NCOA1Q15788 1441 aa33.72■■■□□ 2.99
SNUPN-201ENST00000308588 ANKRD30AQ9BXX3 1397 aa33.71■■■□□ 2.99
SNUPN-201ENST00000308588 ADGRL2O95490 1459 aa33.71■■■□□ 2.99
SNUPN-201ENST00000308588 ADAMTSL3P82987 1691 aa33.7■■■□□ 2.99
SNUPN-201ENST00000308588 KIF15Q9NS87 1388 aa33.7■■■□□ 2.99
SNUPN-201ENST00000308588 DUOX2Q9NRD8 1548 aa33.66■■■□□ 2.98
SNUPN-201ENST00000308588 KIF3BO15066 747 aa33.63■■■□□ 2.97
SNUPN-201ENST00000308588 ROCK1Q13464 1354 aa33.62■■■□□ 2.97
SNUPN-201ENST00000308588 MADDQ8WXG6 1647 aa33.61■■■□□ 2.97
SNUPN-201ENST00000308588 GGT6Q6P531 493 aa33.58■■■□□ 2.97
SNUPN-201ENST00000308588 ERBINQ96RT1 1412 aa33.57■■■□□ 2.96
SNUPN-201ENST00000308588 EIF2AK4Q9P2K8 1649 aaKnown RBP33.54■■■□□ 2.96
SNUPN-201ENST00000308588 FER1L4A9Z1Z3 1794 aa33.53■■■□□ 2.96
SNUPN-201ENST00000308588 RIMS1Q86UR5 1692 aaKnown RBP33.51■■■□□ 2.95
SNUPN-201ENST00000308588 PTPRMP28827 1452 aa33.5■■■□□ 2.95
SNUPN-201ENST00000308588 PPP6R1Q9UPN7 881 aa33.49■■■□□ 2.95
SNUPN-201ENST00000308588 ANKRD50Q9ULJ7 1429 aa33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms