RNA–Protein interactions for RNA: ENST00000308370.11

LTBP4-203, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LTBP4, Length 4,948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-203ENST00000308370 TOP2BQ02880 1626 aa23.23■■□□□ 1.31
LTBP4-203ENST00000308370 CUX1P39880 1505 aa23.2■■□□□ 1.31
LTBP4-203ENST00000308370 PRXQ9BXM0 1461 aa23.2■■□□□ 1.3
LTBP4-203ENST00000308370 BECN1Q14457 450 aa23.19■■□□□ 1.3
LTBP4-203ENST00000308370 SPAG9O60271 1321 aaKnown RBP23.19■■□□□ 1.3
LTBP4-203ENST00000308370 MLECQ14165 292 aa23.18■■□□□ 1.3
LTBP4-203ENST00000308370 KIF3BO15066 747 aa23.18■■□□□ 1.3
LTBP4-203ENST00000308370 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
LTBP4-203ENST00000308370 TOPBP1Q92547 1522 aa23.14■■□□□ 1.29
LTBP4-203ENST00000308370 GOLGA6L22H0YM25 854 aa23.14■■□□□ 1.29
LTBP4-203ENST00000308370 PPM1GO15355 546 aaPredicted RBP23.14■■□□□ 1.29
LTBP4-203ENST00000308370 C14orf37Q86TY3 774 aa23.14■■□□□ 1.29
LTBP4-203ENST00000308370 PHLDB1Q86UU1 1377 aa23.14■■□□□ 1.29
LTBP4-203ENST00000308370 GRIN2BQ13224 1484 aa23.13■■□□□ 1.29
LTBP4-203ENST00000308370 LRRC9Q6ZRR7 1453 aa23.13■■□□□ 1.29
LTBP4-203ENST00000308370 ROCK2O75116 1388 aaKnown RBP23.13■■□□□ 1.29
LTBP4-203ENST00000308370 FGD6Q6ZV73 1430 aa23.12■■□□□ 1.29
LTBP4-203ENST00000308370 CASKIN1Q8WXD9 1431 aa23.12■■□□□ 1.29
LTBP4-203ENST00000308370 CDK11BP21127 795 aaKnown RBP23.12■■□□□ 1.29
LTBP4-203ENST00000308370 POLA1P09884 1462 aaPredicted RBP23.1■■□□□ 1.29
LTBP4-203ENST00000308370 NCLP19338 710 aaKnown RBP23.1■■□□□ 1.29
LTBP4-203ENST00000308370 NEUROD2Q15784 382 aa23.1■■□□□ 1.29
LTBP4-203ENST00000308370 MYOM3Q5VTT5 1437 aa23.09■■□□□ 1.29
LTBP4-203ENST00000308370 NUDCQ9Y266 331 aa23.08■■□□□ 1.29
LTBP4-203ENST00000308370 PLEKHG5O94827 1062 aa23.06■■□□□ 1.28
LTBP4-203ENST00000308370 ZBTB7CA1YPR0 619 aa23.05■■□□□ 1.28
LTBP4-203ENST00000308370 HDGFP51858 240 aaKnown RBP23.05■■□□□ 1.28
LTBP4-203ENST00000308370 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
LTBP4-203ENST00000308370 TRHP20396 242 aaPredicted RBP23.04■■□□□ 1.28
LTBP4-203ENST00000308370 SAFB2Q14151 953 aaKnown RBP eCLIP23.03■■□□□ 1.28
LTBP4-203ENST00000308370 SRPK2P78362 688 aaKnown RBP23.03■■□□□ 1.28
LTBP4-203ENST00000308370 MAPK8IP3Q9UPT6 1336 aa23.03■■□□□ 1.28
LTBP4-203ENST00000308370 ZNF644Q9H582 1327 aaPredicted RBP23.02■■□□□ 1.28
LTBP4-203ENST00000308370 NAP1L5Q96NT1 182 aaPredicted RBP23.02■■□□□ 1.28
LTBP4-203ENST00000308370 PTMAP06454 111 aaKnown RBP23.01■■□□□ 1.27
LTBP4-203ENST00000308370 KTN1Q86UP2 1357 aaKnown RBP23.01■■□□□ 1.27
LTBP4-203ENST00000308370 PPP4R2Q9NY27 417 aa23■■□□□ 1.27
LTBP4-203ENST00000308370 FYCO1Q9BQS8 1478 aa22.99■■□□□ 1.27
LTBP4-203ENST00000308370 DNTTIP2Q5QJE6 756 aaKnown RBP22.99■■□□□ 1.27
LTBP4-203ENST00000308370 STK26Q9P289 416 aa22.99■■□□□ 1.27
LTBP4-203ENST00000308370 OSCARQ8IYS5 282 aa22.99■■□□□ 1.27
LTBP4-203ENST00000308370 NCOA2Q15596 1464 aa22.98■■□□□ 1.27
LTBP4-203ENST00000308370 DNMBPQ6XZF7 1577 aa22.98■■□□□ 1.27
LTBP4-203ENST00000308370 PEG3Q9GZU2 1588 aa22.98■■□□□ 1.27
LTBP4-203ENST00000308370 MORC1Q86VD1 984 aa22.97■■□□□ 1.27
LTBP4-203ENST00000308370 MYH16Q9H6N6 1097 aa22.97■■□□□ 1.27
LTBP4-203ENST00000308370 IFT140Q96RY7 1462 aa22.97■■□□□ 1.27
LTBP4-203ENST00000308370 WASHC2CQ9Y4E1 1318 aa22.97■■□□□ 1.27
LTBP4-203ENST00000308370 U2SURPO15042 1029 aaKnown RBP22.97■■□□□ 1.27
LTBP4-203ENST00000308370 RALBP1Q15311 655 aa22.96■■□□□ 1.27
LTBP4-203ENST00000308370 CCDC144AA2RUR9 1427 aa22.95■■□□□ 1.26
LTBP4-203ENST00000308370 EFCAB5A4FU69 1503 aa22.94■■□□□ 1.26
LTBP4-203ENST00000308370 RRBP1Q9P2E9 1410 aaKnown RBP22.94■■□□□ 1.26
LTBP4-203ENST00000308370 UACAQ9BZF9 1416 aa22.9■■□□□ 1.26
LTBP4-203ENST00000308370 PRDM2Q13029 1718 aa22.89■■□□□ 1.26
LTBP4-203ENST00000308370 LAS1LQ9Y4W2 734 aaKnown RBP22.89■■□□□ 1.26
LTBP4-203ENST00000308370 ST20-MTHFSA0A0A6YYL1 179 aa22.89■■□□□ 1.25
LTBP4-203ENST00000308370 EIF3AQ14152 1382 aaKnown RBP22.89■■□□□ 1.25
LTBP4-203ENST00000308370 FTSJ3Q8IY81 847 aaKnown RBP22.89■■□□□ 1.25
LTBP4-203ENST00000308370 DNAJC5BQ9UF47 199 aa22.88■■□□□ 1.25
LTBP4-203ENST00000308370 RTN4Q9NQC3 1192 aaKnown RBP22.87■■□□□ 1.25
LTBP4-203ENST00000308370 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
LTBP4-203ENST00000308370 UNC13AQ9UPW8 1703 aa22.86■■□□□ 1.25
LTBP4-203ENST00000308370 CYB5RLQ6IPT4 315 aa22.86■■□□□ 1.25
LTBP4-203ENST00000308370 FRAT1Q92837 279 aaPredicted RBP22.86■■□□□ 1.25
LTBP4-203ENST00000308370 PNNQ9H307 717 aaKnown RBP22.86■■□□□ 1.25
LTBP4-203ENST00000308370 B4GALNT3Q6L9W6 998 aa22.85■■□□□ 1.25
LTBP4-203ENST00000308370 KIF15Q9NS87 1388 aa22.84■■□□□ 1.25
LTBP4-203ENST00000308370 ZRSR1Q15695 479 aaKnown RBP22.84■■□□□ 1.25
LTBP4-203ENST00000308370 LMOD2Q6P5Q4 547 aa22.83■■□□□ 1.25
LTBP4-203ENST00000308370 HDGFL2Q7Z4V5 671 aaPredicted RBP22.83■■□□□ 1.25
LTBP4-203ENST00000308370 LAMC3Q9Y6N6 1575 aa22.82■■□□□ 1.24
LTBP4-203ENST00000308370 PRG4Q92954 1404 aaPredicted RBP22.82■■□□□ 1.24
LTBP4-203ENST00000308370 NUTM2DQ5VT03 806 aaPredicted RBP22.81■■□□□ 1.24
LTBP4-203ENST00000308370 SNAPC4Q5SXM2 1469 aa22.8■■□□□ 1.24
LTBP4-203ENST00000308370 NLRP13Q86W25 1043 aa22.8■■□□□ 1.24
LTBP4-203ENST00000308370 ANKRD50Q9ULJ7 1429 aa22.79■■□□□ 1.24
LTBP4-203ENST00000308370 NOP58Q9Y2X3 529 aaKnown RBP22.79■■□□□ 1.24
LTBP4-203ENST00000308370 USP47Q96K76 1375 aa22.78■■□□□ 1.24
LTBP4-203ENST00000308370 TIAM1Q13009 1591 aa22.77■■□□□ 1.24
LTBP4-203ENST00000308370 HAP1P54257 671 aaPredicted RBP22.77■■□□□ 1.24
LTBP4-203ENST00000308370 SYNJ2O15056 1496 aa22.77■■□□□ 1.23
LTBP4-203ENST00000308370 SOX12O15370 315 aa22.75■■□□□ 1.23
LTBP4-203ENST00000308370 TRAK1Q9UPV9 953 aa22.75■■□□□ 1.23
LTBP4-203ENST00000308370 MS4A1P11836 297 aa22.74■■□□□ 1.23
LTBP4-203ENST00000308370 A0A0G2JS52 829 aa22.73■■□□□ 1.23
LTBP4-203ENST00000308370 PRKRIP1Q9H875 184 aaPredicted RBP22.73■■□□□ 1.23
LTBP4-203ENST00000308370 EHBP1L1Q8N3D4 1523 aa22.73■■□□□ 1.23
LTBP4-203ENST00000308370 U2AF1L5P0DN76 240 aaPredicted RBP22.72■■□□□ 1.23
LTBP4-203ENST00000308370 U2AF1Q01081 240 aaKnown RBP eCLIP22.72■■□□□ 1.23
LTBP4-203ENST00000308370 RGS3P49796 1198 aa22.71■■□□□ 1.23
LTBP4-203ENST00000308370 MIA2Q96PC5 1412 aa22.71■■□□□ 1.23
LTBP4-203ENST00000308370 PANK3Q9H999 370 aa22.7■■□□□ 1.23
LTBP4-203ENST00000308370 KIAA0586Q9BVV6 1533 aa22.7■■□□□ 1.22
LTBP4-203ENST00000308370 TERF2IPQ9NYB0 399 aa22.69■■□□□ 1.22
LTBP4-203ENST00000308370 RCAN3Q9UKA8 241 aa22.69■■□□□ 1.22
LTBP4-203ENST00000308370 TROQ12816 1431 aaPredicted RBP22.69■■□□□ 1.22
LTBP4-203ENST00000308370 VGFO15240 615 aaPredicted RBP22.68■■□□□ 1.22
LTBP4-203ENST00000308370 NRDCO43847 1150 aa22.68■■□□□ 1.22
LTBP4-203ENST00000308370 CHMP4BQ9H444 224 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms