RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 SUPT6HQ7KZ85 1726 aaKnown RBP25.27■■□□□ 1.64
CHRNB1-201ENST00000306071 ABCA5Q8WWZ7 1642 aa25.26■■□□□ 1.63
CHRNB1-201ENST00000306071 GCC2Q8IWJ2 1684 aa25.26■■□□□ 1.63
CHRNB1-201ENST00000306071 TCERG1O14776 1098 aaKnown RBP25.25■■□□□ 1.63
CHRNB1-201ENST00000306071 POLR3GLQ9BT43 218 aa25.25■■□□□ 1.63
CHRNB1-201ENST00000306071 POLR1AO95602 1720 aaPredicted RBP25.25■■□□□ 1.63
CHRNB1-201ENST00000306071 PDE4AP27815 886 aa25.24■■□□□ 1.63
CHRNB1-201ENST00000306071 PPM1GO15355 546 aaPredicted RBP25.23■■□□□ 1.63
CHRNB1-201ENST00000306071 CTTNBP2Q8WZ74 1663 aa25.23■■□□□ 1.63
CHRNB1-201ENST00000306071 KDM6BO15054 1643 aa25.23■■□□□ 1.63
CHRNB1-201ENST00000306071 SPATA31E1Q6ZUB1 1445 aa25.23■■□□□ 1.63
CHRNB1-201ENST00000306071 LRRIQ1Q96JM4 1722 aa25.22■■□□□ 1.63
CHRNB1-201ENST00000306071 WASHC2CQ9Y4E1 1318 aa25.21■■□□□ 1.63
CHRNB1-201ENST00000306071 DHX29Q7Z478 1369 aaKnown RBP25.2■■□□□ 1.62
CHRNB1-201ENST00000306071 EHBP1L1Q8N3D4 1523 aa25.19■■□□□ 1.62
CHRNB1-201ENST00000306071 EXOC6Q8TAG9 804 aa25.18■■□□□ 1.62
CHRNB1-201ENST00000306071 TMC1Q8TDI8 760 aa25.17■■□□□ 1.62
CHRNB1-201ENST00000306071 BACH2Q9BYV9 841 aa25.17■■□□□ 1.62
CHRNB1-201ENST00000306071 RPRD2Q5VT52 1461 aaKnown RBP25.16■■□□□ 1.62
CHRNB1-201ENST00000306071 UGGT2Q9NYU1 1516 aa25.16■■□□□ 1.62
CHRNB1-201ENST00000306071 RRP1P56182 461 aaKnown RBP25.15■■□□□ 1.62
CHRNB1-201ENST00000306071 PNISRQ8TF01 805 aaKnown RBP25.15■■□□□ 1.62
CHRNB1-201ENST00000306071 CADPSQ9ULU8 1353 aa25.15■■□□□ 1.62
CHRNB1-201ENST00000306071 GRIN2BQ13224 1484 aa25.13■■□□□ 1.61
CHRNB1-201ENST00000306071 TEX14Q8IWB6 1497 aa25.13■■□□□ 1.61
CHRNB1-201ENST00000306071 ANKRD30BQ9BXX2 1392 aa25.13■■□□□ 1.61
CHRNB1-201ENST00000306071 BRPF3Q9ULD4 1205 aa25.12■■□□□ 1.61
CHRNB1-201ENST00000306071 MS4A1P11836 297 aa25.11■■□□□ 1.61
CHRNB1-201ENST00000306071 RAD54L2Q9Y4B4 1467 aa25.11■■□□□ 1.61
CHRNB1-201ENST00000306071 TCOF1Q13428 1488 aaKnown RBP25.11■■□□□ 1.61
CHRNB1-201ENST00000306071 CUL7Q14999 1698 aa25.1■■□□□ 1.61
CHRNB1-201ENST00000306071 CC2D2AQ9P2K1 1620 aa25.09■■□□□ 1.61
CHRNB1-201ENST00000306071 MIA2Q96PC5 1412 aa25.08■■□□□ 1.61
CHRNB1-201ENST00000306071 GSE1Q14687 1217 aa25.08■■□□□ 1.61
CHRNB1-201ENST00000306071 THOC2Q8NI27 1593 aaKnown RBP25.07■■□□□ 1.6
CHRNB1-201ENST00000306071 ARHGEF11O15085 1522 aa25.07■■□□□ 1.6
CHRNB1-201ENST00000306071 RCAN3Q9UKA8 241 aa25.06■■□□□ 1.6
CHRNB1-201ENST00000306071 DDRGK1Q96HY6 314 aa25.06■■□□□ 1.6
CHRNB1-201ENST00000306071 UBE2Q2Q8WVN8 375 aa25.05■■□□□ 1.6
CHRNB1-201ENST00000306071 ABCA10Q8WWZ4 1543 aa25.05■■□□□ 1.6
CHRNB1-201ENST00000306071 MAGI3Q5TCQ9 1506 aa25.04■■□□□ 1.6
CHRNB1-201ENST00000306071 SAMD9Q5K651 1589 aa25.04■■□□□ 1.6
CHRNB1-201ENST00000306071 SLC4A1APQ9BWU0 796 aaKnown RBP25.03■■□□□ 1.6
CHRNB1-201ENST00000306071 ZNF326Q5BKZ1 582 aaKnown RBP25.02■■□□□ 1.6
CHRNB1-201ENST00000306071 USP47Q96K76 1375 aa25.02■■□□□ 1.6
CHRNB1-201ENST00000306071 EIF5BO60841 1220 aaKnown RBP25.01■■□□□ 1.59
CHRNB1-201ENST00000306071 BCORL1Q5H9F3 1711 aa25.01■■□□□ 1.59
CHRNB1-201ENST00000306071 NFKBIBQ15653 356 aa24.99■■□□□ 1.59
CHRNB1-201ENST00000306071 LRPPRCP42704 1394 aaKnown RBP24.97■■□□□ 1.59
CHRNB1-201ENST00000306071 ARID4BQ4LE39 1312 aaPredicted RBP24.96■■□□□ 1.59
CHRNB1-201ENST00000306071 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.59
CHRNB1-201ENST00000306071 DAXXQ9UER7 740 aaPredicted RBP24.95■■□□□ 1.58
CHRNB1-201ENST00000306071 FRAT1Q92837 279 aaPredicted RBP24.95■■□□□ 1.58
CHRNB1-201ENST00000306071 FANCD2Q9BXW9 1451 aa24.94■■□□□ 1.58
CHRNB1-201ENST00000306071 KIF15Q9NS87 1388 aa24.93■■□□□ 1.58
CHRNB1-201ENST00000306071 ROCK2O75116 1388 aaKnown RBP24.93■■□□□ 1.58
CHRNB1-201ENST00000306071 BRD4O60885 1362 aaPredicted RBP24.92■■□□□ 1.58
CHRNB1-201ENST00000306071 DNMBPQ6XZF7 1577 aa24.92■■□□□ 1.58
CHRNB1-201ENST00000306071 SLC4A3P48751 1232 aa24.92■■□□□ 1.58
CHRNB1-201ENST00000306071 SKAP1Q86WV1 359 aa24.92■■□□□ 1.58
CHRNB1-201ENST00000306071 MYBBP1AQ9BQG0 1328 aaKnown RBP24.91■■□□□ 1.58
CHRNB1-201ENST00000306071 ROCK1Q13464 1354 aa24.88■■□□□ 1.57
CHRNB1-201ENST00000306071 PLIN1O60240 522 aa24.87■■□□□ 1.57
CHRNB1-201ENST00000306071 PDE3BQ13370 1112 aa24.87■■□□□ 1.57
CHRNB1-201ENST00000306071 TOPBP1Q92547 1522 aa24.87■■□□□ 1.57
CHRNB1-201ENST00000306071 RALBP1Q15311 655 aa24.86■■□□□ 1.57
CHRNB1-201ENST00000306071 DAPK1P53355 1430 aa24.86■■□□□ 1.57
CHRNB1-201ENST00000306071 KDM5CP41229 1560 aa24.85■■□□□ 1.57
CHRNB1-201ENST00000306071 MBD5Q9P267 1494 aa24.84■■□□□ 1.57
CHRNB1-201ENST00000306071 ARID3CA6NKF2 412 aa24.84■■□□□ 1.57
CHRNB1-201ENST00000306071 KIF21AQ7Z4S6 1674 aa24.83■■□□□ 1.57
CHRNB1-201ENST00000306071 CDCA7LQ96GN5 454 aa24.82■■□□□ 1.56
CHRNB1-201ENST00000306071 CRBNQ96SW2 442 aa24.82■■□□□ 1.56
CHRNB1-201ENST00000306071 KIF14Q15058 1648 aa24.82■■□□□ 1.56
CHRNB1-201ENST00000306071 KTN1Q86UP2 1357 aaKnown RBP24.82■■□□□ 1.56
CHRNB1-201ENST00000306071 EPRSP07814 1512 aaKnown RBP24.81■■□□□ 1.56
CHRNB1-201ENST00000306071 CARD11Q9BXL7 1154 aa24.79■■□□□ 1.56
CHRNB1-201ENST00000306071 NESP48681 1621 aa24.79■■□□□ 1.56
CHRNB1-201ENST00000306071 ABCC5O15440 1437 aa24.78■■□□□ 1.56
CHRNB1-201ENST00000306071 CDK13Q14004 1512 aaKnown RBP24.78■■□□□ 1.56
CHRNB1-201ENST00000306071 PZPP20742 1482 aa24.76■■□□□ 1.55
CHRNB1-201ENST00000306071 NLRP13Q86W25 1043 aa24.76■■□□□ 1.55
CHRNB1-201ENST00000306071 RSPH6AQ9H0K4 717 aa24.75■■□□□ 1.55
CHRNB1-201ENST00000306071 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
CHRNB1-201ENST00000306071 ZNF644Q9H582 1327 aaPredicted RBP24.75■■□□□ 1.55
CHRNB1-201ENST00000306071 DNMT1P26358 1616 aaKnown RBP24.74■■□□□ 1.55
CHRNB1-201ENST00000306071 FRAT2O75474 233 aaPredicted RBP24.74■■□□□ 1.55
CHRNB1-201ENST00000306071 ST20-MTHFSA0A0A6YYL1 179 aa24.73■■□□□ 1.55
CHRNB1-201ENST00000306071 FAM43AQ8N2R8 423 aa24.72■■□□□ 1.55
CHRNB1-201ENST00000306071 KIAA1107Q9UPP5 1409 aa24.72■■□□□ 1.55
CHRNB1-201ENST00000306071 PKD2Q13563 968 aa24.7■■□□□ 1.55
CHRNB1-201ENST00000306071 FAM161AQ3B820 660 aa24.69■■□□□ 1.54
CHRNB1-201ENST00000306071 RALGAPBQ86X10 1494 aa24.69■■□□□ 1.54
CHRNB1-201ENST00000306071 GAPVD1Q14C86 1478 aa24.67■■□□□ 1.54
CHRNB1-201ENST00000306071 C20orf194Q5TEA3 1177 aa24.66■■□□□ 1.54
CHRNB1-201ENST00000306071 CENPQQ7L2Z9 268 aaPredicted RBP24.66■■□□□ 1.54
CHRNB1-201ENST00000306071 DCAF11Q8TEB1 546 aa24.66■■□□□ 1.54
CHRNB1-201ENST00000306071 KDM2BQ8NHM5 1336 aa24.66■■□□□ 1.54
CHRNB1-201ENST00000306071 UHRF1BP1Q6BDS2 1440 aa24.65■■□□□ 1.54
CHRNB1-201ENST00000306071 KDM2AQ9Y2K7 1162 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms