RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 DAPK1P53355 1430 aa26.53■■□□□ 1.84
RNF139-201ENST00000303545 ABCC5O15440 1437 aa26.51■■□□□ 1.83
RNF139-201ENST00000303545 CFDP1Q9UEE9 299 aaPredicted RBP26.49■■□□□ 1.83
RNF139-201ENST00000303545 CARMIL2Q6F5E8 1435 aa26.48■■□□□ 1.83
RNF139-201ENST00000303545 NUP160Q12769 1436 aa26.47■■□□□ 1.83
RNF139-201ENST00000303545 TROQ12816 1431 aaPredicted RBP26.46■■□□□ 1.83
RNF139-201ENST00000303545 KIF14Q15058 1648 aa26.46■■□□□ 1.83
RNF139-201ENST00000303545 AKNAQ7Z591 1439 aa26.44■■□□□ 1.82
RNF139-201ENST00000303545 KDM5BQ9UGL1 1544 aa26.44■■□□□ 1.82
RNF139-201ENST00000303545 DNMT1P26358 1616 aaKnown RBP26.43■■□□□ 1.82
RNF139-201ENST00000303545 CAMSAP2Q08AD1 1489 aa26.4■■□□□ 1.82
RNF139-201ENST00000303545 GPATCH8Q9UKJ3 1502 aaKnown RBP26.38■■□□□ 1.81
RNF139-201ENST00000303545 L3MBTL2Q969R5 705 aa26.37■■□□□ 1.81
RNF139-201ENST00000303545 SLC4A1APQ9BWU0 796 aaKnown RBP26.37■■□□□ 1.81
RNF139-201ENST00000303545 ROCK1Q13464 1354 aa26.36■■□□□ 1.81
RNF139-201ENST00000303545 PLEKHD1A6NEE1 506 aa26.35■■□□□ 1.81
RNF139-201ENST00000303545 ANP32CO43423 234 aa26.32■■□□□ 1.8
RNF139-201ENST00000303545 HSPA5P11021 654 aaKnown RBP26.32■■□□□ 1.8
RNF139-201ENST00000303545 ATP10BO94823 1461 aa26.3■■□□□ 1.8
RNF139-201ENST00000303545 ITSN2Q9NZM3 1697 aa26.29■■□□□ 1.8
RNF139-201ENST00000303545 ABCA8O94911 1581 aa26.27■■□□□ 1.8
RNF139-201ENST00000303545 ANKRD30BQ9BXX2 1392 aa26.27■■□□□ 1.8
RNF139-201ENST00000303545 ADCY10Q96PN6 1610 aa26.25■■□□□ 1.79
RNF139-201ENST00000303545 NCOA1Q15788 1441 aa26.25■■□□□ 1.79
RNF139-201ENST00000303545 NBPF8Q3BBV2 869 aa26.23■■□□□ 1.79
RNF139-201ENST00000303545 PTPRGP23470 1445 aa26.22■■□□□ 1.79
RNF139-201ENST00000303545 CDC42BPAQ5VT25 1732 aa26.21■■□□□ 1.79
RNF139-201ENST00000303545 WASHC2AQ641Q2 1341 aa26.21■■□□□ 1.79
RNF139-201ENST00000303545 EIF4G2P78344 907 aaKnown RBP eCLIP26.2■■□□□ 1.78
RNF139-201ENST00000303545 HNRNPMP52272 730 aaKnown RBP eCLIP26.19■■□□□ 1.78
RNF139-201ENST00000303545 CHD1O14646 1710 aa26.19■■□□□ 1.78
RNF139-201ENST00000303545 PZPP20742 1482 aa26.19■■□□□ 1.78
RNF139-201ENST00000303545 SUPT16HQ9Y5B9 1047 aaKnown RBP26.18■■□□□ 1.78
RNF139-201ENST00000303545 RPRD2Q5VT52 1461 aaKnown RBP26.18■■□□□ 1.78
RNF139-201ENST00000303545 ADGBQ8N7X0 1667 aa26.18■■□□□ 1.78
RNF139-201ENST00000303545 ABCC10Q5T3U5 1492 aa26.17■■□□□ 1.78
RNF139-201ENST00000303545 ANKRD30AQ9BXX3 1397 aa26.16■■□□□ 1.78
RNF139-201ENST00000303545 CROCC2H7BZ55 1655 aa26.15■■□□□ 1.78
RNF139-201ENST00000303545 PKD2Q13563 968 aa26.15■■□□□ 1.78
RNF139-201ENST00000303545 C11orf95C9JLR9 678 aaPredicted RBP26.15■■□□□ 1.78
RNF139-201ENST00000303545 ZNF326Q5BKZ1 582 aaKnown RBP26.14■■□□□ 1.78
RNF139-201ENST00000303545 CCER2I3L3R5 266 aa26.13■■□□□ 1.77
RNF139-201ENST00000303545 TEX14Q8IWB6 1497 aa26.12■■□□□ 1.77
RNF139-201ENST00000303545 ANKRD50Q9ULJ7 1429 aa26.11■■□□□ 1.77
RNF139-201ENST00000303545 ADGRL2O95490 1459 aa26.1■■□□□ 1.77
RNF139-201ENST00000303545 C9orf84Q5VXU9 1444 aa26.1■■□□□ 1.77
RNF139-201ENST00000303545 TSPY4P0CV99 314 aa26.09■■□□□ 1.77
RNF139-201ENST00000303545 TSPY10P0CW01 314 aa26.09■■□□□ 1.77
RNF139-201ENST00000303545 ERCC6L2Q5T890 1561 aa26.07■■□□□ 1.76
RNF139-201ENST00000303545 NUP155O75694 1391 aa26.06■■□□□ 1.76
RNF139-201ENST00000303545 KIAA1107Q9UPP5 1409 aa26.04■■□□□ 1.76
RNF139-201ENST00000303545 BCANQ96GW7 911 aa26.01■■□□□ 1.75
RNF139-201ENST00000303545 KIF15Q9NS87 1388 aa26■■□□□ 1.75
RNF139-201ENST00000303545 CNGB1Q14028 1251 aaPredicted RBP25.98■■□□□ 1.75
RNF139-201ENST00000303545 CDC42BPBQ9Y5S2 1711 aa25.98■■□□□ 1.75
RNF139-201ENST00000303545 CCDC7Q96M83 1385 aa25.97■■□□□ 1.75
RNF139-201ENST00000303545 POLR3GLQ9BT43 218 aa25.97■■□□□ 1.75
RNF139-201ENST00000303545 SAMD9LQ8IVG5 1584 aa25.96■■□□□ 1.75
RNF139-201ENST00000303545 CCDC184Q52MB2 194 aa25.95■■□□□ 1.74
RNF139-201ENST00000303545 MBD5Q9P267 1494 aa25.95■■□□□ 1.74
RNF139-201ENST00000303545 SHANK2Q9UPX8 1470 aa25.94■■□□□ 1.74
RNF139-201ENST00000303545 KDM2AQ9Y2K7 1162 aa25.94■■□□□ 1.74
RNF139-201ENST00000303545 CNTLNQ9NXG0 1405 aa25.94■■□□□ 1.74
RNF139-201ENST00000303545 FKBP8Q14318 412 aa25.93■■□□□ 1.74
RNF139-201ENST00000303545 KIF7Q2M1P5 1343 aa25.93■■□□□ 1.74
RNF139-201ENST00000303545 TTC37Q6PGP7 1564 aa25.92■■□□□ 1.74
RNF139-201ENST00000303545 HNRNPUQ00839 825 aaKnown RBP eCLIP25.91■■□□□ 1.74
RNF139-201ENST00000303545 SHROOM2Q13796 1616 aa25.91■■□□□ 1.74
RNF139-201ENST00000303545 PREX2Q70Z35 1606 aa25.9■■□□□ 1.74
RNF139-201ENST00000303545 ARHGAP5Q13017 1502 aa25.9■■□□□ 1.74
RNF139-201ENST00000303545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.9■■□□□ 1.74
RNF139-201ENST00000303545 SPATA31E1Q6ZUB1 1445 aa25.89■■□□□ 1.74
RNF139-201ENST00000303545 SYCP2Q9BX26 1530 aa25.89■■□□□ 1.73
RNF139-201ENST00000303545 CCDC141Q6ZP82 1450 aa25.88■■□□□ 1.73
RNF139-201ENST00000303545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.87■■□□□ 1.73
RNF139-201ENST00000303545 ARHGEF5Q12774 1597 aa25.87■■□□□ 1.73
RNF139-201ENST00000303545 USP47Q96K76 1375 aa25.83■■□□□ 1.73
RNF139-201ENST00000303545 ABCC2Q92887 1545 aa25.83■■□□□ 1.73
RNF139-201ENST00000303545 PRKRIP1Q9H875 184 aaPredicted RBP25.83■■□□□ 1.73
RNF139-201ENST00000303545 DCAF11Q8TEB1 546 aa25.83■■□□□ 1.72
RNF139-201ENST00000303545 FAM9BQ8IZU0 186 aa25.81■■□□□ 1.72
RNF139-201ENST00000303545 BCORL1Q5H9F3 1711 aa25.77■■□□□ 1.72
RNF139-201ENST00000303545 RGL3Q3MIN7 710 aa25.77■■□□□ 1.72
RNF139-201ENST00000303545 CARD11Q9BXL7 1154 aa25.77■■□□□ 1.72
RNF139-201ENST00000303545 MRS2Q9HD23 443 aa25.77■■□□□ 1.72
RNF139-201ENST00000303545 KDM5DQ9BY66 1539 aa25.76■■□□□ 1.71
RNF139-201ENST00000303545 FAM135AQ9P2D6 1515 aa25.76■■□□□ 1.71
RNF139-201ENST00000303545 RSPH4AQ5TD94 716 aa25.75■■□□□ 1.71
RNF139-201ENST00000303545 MYO5CQ9NQX4 1742 aa25.74■■□□□ 1.71
RNF139-201ENST00000303545 NEFLP07196 543 aa25.74■■□□□ 1.71
RNF139-201ENST00000303545 ARHGEF12Q9NZN5 1544 aa25.73■■□□□ 1.71
RNF139-201ENST00000303545 ZCCHC11Q5TAX3 1644 aaKnown RBP25.72■■□□□ 1.71
RNF139-201ENST00000303545 POLR1AO95602 1720 aaPredicted RBP25.71■■□□□ 1.71
RNF139-201ENST00000303545 PLEKHH2Q8IVE3 1493 aa25.71■■□□□ 1.71
RNF139-201ENST00000303545 MYT1Q01538 1121 aa25.71■■□□□ 1.71
RNF139-201ENST00000303545 KDM5CP41229 1560 aa25.7■■□□□ 1.71
RNF139-201ENST00000303545 CLASP1Q7Z460 1538 aa25.69■■□□□ 1.7
RNF139-201ENST00000303545 IRX6P78412 446 aaPredicted RBP25.68■■□□□ 1.7
RNF139-201ENST00000303545 ST20-MTHFSA0A0A6YYL1 179 aa25.68■■□□□ 1.7
RNF139-201ENST00000303545 UHRF1BP1Q6BDS2 1440 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms