RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ABCC5O15440 1437 aa20.84■□□□□ 0.93
SMG8-201ENST00000300917 DAPK1P53355 1430 aa20.84■□□□□ 0.93
SMG8-201ENST00000300917 KIF14Q15058 1648 aa20.83■□□□□ 0.92
SMG8-201ENST00000300917 KCNH8Q96L42 1107 aa20.83■□□□□ 0.92
SMG8-201ENST00000300917 ATP10BO94823 1461 aa20.82■□□□□ 0.92
SMG8-201ENST00000300917 GTF3C3Q9Y5Q9 886 aa20.81■□□□□ 0.92
SMG8-201ENST00000300917 SLC4A1APQ9BWU0 796 aaKnown RBP20.81■□□□□ 0.92
SMG8-201ENST00000300917 HNRNPMP52272 730 aaKnown RBP eCLIP20.8■□□□□ 0.92
SMG8-201ENST00000300917 GPATCH8Q9UKJ3 1502 aaKnown RBP20.79■□□□□ 0.92
SMG8-201ENST00000300917 CAMSAP2Q08AD1 1489 aa20.76■□□□□ 0.91
SMG8-201ENST00000300917 CHD1O14646 1710 aa20.76■□□□□ 0.91
SMG8-201ENST00000300917 TIMELESSQ9UNS1 1208 aa20.74■□□□□ 0.91
SMG8-201ENST00000300917 ERCC6L2Q5T890 1561 aa20.74■□□□□ 0.91
SMG8-201ENST00000300917 DENND4BO75064 1496 aaPredicted RBP20.72■□□□□ 0.91
SMG8-201ENST00000300917 ABCA8O94911 1581 aa20.71■□□□□ 0.91
SMG8-201ENST00000300917 L3MBTL2Q969R5 705 aa20.71■□□□□ 0.91
SMG8-201ENST00000300917 TSPY4P0CV99 314 aa20.69■□□□□ 0.9
SMG8-201ENST00000300917 TSPY10P0CW01 314 aa20.69■□□□□ 0.9
SMG8-201ENST00000300917 ZNF326Q5BKZ1 582 aaKnown RBP20.68■□□□□ 0.9
SMG8-201ENST00000300917 AKNAQ7Z591 1439 aa20.68■□□□□ 0.9
SMG8-201ENST00000300917 DNMT1P26358 1616 aaKnown RBP20.67■□□□□ 0.9
SMG8-201ENST00000300917 ROCK1Q13464 1354 aa20.65■□□□□ 0.9
SMG8-201ENST00000300917 NCOA1Q15788 1441 aa20.65■□□□□ 0.9
SMG8-201ENST00000300917 GCC2Q8IWJ2 1684 aa20.65■□□□□ 0.9
SMG8-201ENST00000300917 PKD2Q13563 968 aa20.64■□□□□ 0.89
SMG8-201ENST00000300917 ANKRD30AQ9BXX3 1397 aa20.62■□□□□ 0.89
SMG8-201ENST00000300917 ABCC10Q5T3U5 1492 aa20.6■□□□□ 0.89
SMG8-201ENST00000300917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.6■□□□□ 0.89
SMG8-201ENST00000300917 HSPA5P11021 654 aaKnown RBP20.59■□□□□ 0.89
SMG8-201ENST00000300917 NUP155O75694 1391 aa20.58■□□□□ 0.88
SMG8-201ENST00000300917 C9orf84Q5VXU9 1444 aa20.58■□□□□ 0.88
SMG8-201ENST00000300917 ANKRD50Q9ULJ7 1429 aa20.57■□□□□ 0.88
SMG8-201ENST00000300917 ITSN2Q9NZM3 1697 aa20.57■□□□□ 0.88
SMG8-201ENST00000300917 NBPF8Q3BBV2 869 aa20.57■□□□□ 0.88
SMG8-201ENST00000300917 ANKRD30BQ9BXX2 1392 aa20.57■□□□□ 0.88
SMG8-201ENST00000300917 CNGB1Q14028 1251 aaPredicted RBP20.55■□□□□ 0.88
SMG8-201ENST00000300917 CDC42BPAQ5VT25 1732 aa20.55■□□□□ 0.88
SMG8-201ENST00000300917 ADCY10Q96PN6 1610 aa20.53■□□□□ 0.88
SMG8-201ENST00000300917 KIF15Q9NS87 1388 aa20.53■□□□□ 0.88
SMG8-201ENST00000300917 KDM5BQ9UGL1 1544 aa20.53■□□□□ 0.88
SMG8-201ENST00000300917 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.88
SMG8-201ENST00000300917 KDM2AQ9Y2K7 1162 aa20.52■□□□□ 0.87
SMG8-201ENST00000300917 PZPP20742 1482 aa20.51■□□□□ 0.87
SMG8-201ENST00000300917 EIF4G2P78344 907 aaKnown RBP eCLIP20.51■□□□□ 0.87
SMG8-201ENST00000300917 ANP32CO43423 234 aa20.51■□□□□ 0.87
SMG8-201ENST00000300917 ARHGAP5Q13017 1502 aa20.5■□□□□ 0.87
SMG8-201ENST00000300917 MYT1LQ9UL68 1186 aa20.47■□□□□ 0.87
SMG8-201ENST00000300917 C11orf95C9JLR9 678 aaPredicted RBP20.45■□□□□ 0.86
SMG8-201ENST00000300917 ABCC2Q92887 1545 aa20.45■□□□□ 0.86
SMG8-201ENST00000300917 SHROOM2Q13796 1616 aa20.45■□□□□ 0.86
SMG8-201ENST00000300917 RPRD2Q5VT52 1461 aaKnown RBP20.45■□□□□ 0.86
SMG8-201ENST00000300917 WASHC2AQ641Q2 1341 aa20.45■□□□□ 0.86
SMG8-201ENST00000300917 TTC37Q6PGP7 1564 aa20.45■□□□□ 0.86
SMG8-201ENST00000300917 MBD5Q9P267 1494 aa20.44■□□□□ 0.86
SMG8-201ENST00000300917 ADGRL2O95490 1459 aa20.44■□□□□ 0.86
SMG8-201ENST00000300917 SYCP2Q9BX26 1530 aa20.43■□□□□ 0.86
SMG8-201ENST00000300917 SAMD9LQ8IVG5 1584 aa20.43■□□□□ 0.86
SMG8-201ENST00000300917 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.43■□□□□ 0.86
SMG8-201ENST00000300917 RGL3Q3MIN7 710 aa20.43■□□□□ 0.86
SMG8-201ENST00000300917 KIAA1107Q9UPP5 1409 aa20.43■□□□□ 0.86
SMG8-201ENST00000300917 PELP1Q8IZL8 1130 aaKnown RBP20.42■□□□□ 0.86
SMG8-201ENST00000300917 CCDC141Q6ZP82 1450 aa20.41■□□□□ 0.86
SMG8-201ENST00000300917 AFAP1Q8N556 730 aa20.4■□□□□ 0.86
SMG8-201ENST00000300917 ADGBQ8N7X0 1667 aa20.4■□□□□ 0.86
SMG8-201ENST00000300917 CDC42BPBQ9Y5S2 1711 aa20.4■□□□□ 0.86
SMG8-201ENST00000300917 EFCAB2Q5VUJ9 269 aa20.39■□□□□ 0.86
SMG8-201ENST00000300917 CLASP1Q7Z460 1538 aa20.39■□□□□ 0.85
SMG8-201ENST00000300917 CROCC2H7BZ55 1655 aa20.39■□□□□ 0.85
SMG8-201ENST00000300917 DCAF11Q8TEB1 546 aa20.38■□□□□ 0.85
SMG8-201ENST00000300917 TEX14Q8IWB6 1497 aa20.37■□□□□ 0.85
SMG8-201ENST00000300917 PREX2Q70Z35 1606 aa20.34■□□□□ 0.85
SMG8-201ENST00000300917 RSPH4AQ5TD94 716 aa20.34■□□□□ 0.85
SMG8-201ENST00000300917 SHANK2Q9UPX8 1470 aa20.34■□□□□ 0.85
SMG8-201ENST00000300917 OSCARQ8IYS5 282 aa20.33■□□□□ 0.85
SMG8-201ENST00000300917 ARHGEF12Q9NZN5 1544 aa20.33■□□□□ 0.84
SMG8-201ENST00000300917 ZCCHC11Q5TAX3 1644 aaKnown RBP20.33■□□□□ 0.84
SMG8-201ENST00000300917 PLEKHH2Q8IVE3 1493 aa20.31■□□□□ 0.84
SMG8-201ENST00000300917 TRAPPC8Q9Y2L5 1435 aa20.3■□□□□ 0.84
SMG8-201ENST00000300917 PLCH2O75038 1416 aa20.29■□□□□ 0.84
SMG8-201ENST00000300917 CARD11Q9BXL7 1154 aa20.28■□□□□ 0.84
SMG8-201ENST00000300917 SPAG9O60271 1321 aaKnown RBP20.28■□□□□ 0.84
SMG8-201ENST00000300917 ARHGEF5Q12774 1597 aa20.28■□□□□ 0.84
SMG8-201ENST00000300917 KIF7Q2M1P5 1343 aa20.27■□□□□ 0.83
SMG8-201ENST00000300917 NPM1P06748 294 aaKnown RBP eCLIP20.26■□□□□ 0.83
SMG8-201ENST00000300917 CCDC7Q96M83 1385 aa20.26■□□□□ 0.83
SMG8-201ENST00000300917 CCDC184Q52MB2 194 aa20.25■□□□□ 0.83
SMG8-201ENST00000300917 MYO5CQ9NQX4 1742 aa20.24■□□□□ 0.83
SMG8-201ENST00000300917 USP47Q96K76 1375 aa20.24■□□□□ 0.83
SMG8-201ENST00000300917 CCER2I3L3R5 266 aa20.23■□□□□ 0.83
SMG8-201ENST00000300917 FAM135AQ9P2D6 1515 aa20.23■□□□□ 0.83
SMG8-201ENST00000300917 UHRF1BP1LA0JNW5 1464 aa20.21■□□□□ 0.83
SMG8-201ENST00000300917 SENP3-EIF4A1A0A087X0R7 540 aa20.21■□□□□ 0.83
SMG8-201ENST00000300917 CCDC144AA2RUR9 1427 aa20.2■□□□□ 0.82
SMG8-201ENST00000300917 BCANQ96GW7 911 aa20.19■□□□□ 0.82
SMG8-201ENST00000300917 ST20-MTHFSA0A0A6YYL1 179 aa20.19■□□□□ 0.82
SMG8-201ENST00000300917 HNRNPUQ00839 825 aaKnown RBP eCLIP20.19■□□□□ 0.82
SMG8-201ENST00000300917 FAM9BQ8IZU0 186 aa20.19■□□□□ 0.82
SMG8-201ENST00000300917 NBPF1Q3BBV0 1214 aa20.18■□□□□ 0.82
SMG8-201ENST00000300917 KIF3BO15066 747 aa20.18■□□□□ 0.82
SMG8-201ENST00000300917 WDR7Q9Y4E6 1490 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms