RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 KANK4Q5T7N3 995 aaPredicted RBP21.4■■□□□ 1.02
CNTNAP3-201ENST00000297668 ARHGAP35Q9NRY4 1499 aa21.39■■□□□ 1.01
CNTNAP3-201ENST00000297668 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.01
CNTNAP3-201ENST00000297668 MCCP23508 829 aa21.38■■□□□ 1.01
CNTNAP3-201ENST00000297668 CFAP44Q96MT7 982 aa21.38■■□□□ 1.01
CNTNAP3-201ENST00000297668 SPRYD3Q8NCJ5 442 aa21.37■■□□□ 1.01
CNTNAP3-201ENST00000297668 RCAN3Q9UKA8 241 aa21.37■■□□□ 1.01
CNTNAP3-201ENST00000297668 SAFB2Q14151 953 aaKnown RBP eCLIP21.37■■□□□ 1.01
CNTNAP3-201ENST00000297668 FOXD1Q16676 465 aa21.37■■□□□ 1.01
CNTNAP3-201ENST00000297668 EIF4G1Q04637 1599 aaKnown RBP21.36■■□□□ 1.01
CNTNAP3-201ENST00000297668 SOX12O15370 315 aa21.36■■□□□ 1.01
CNTNAP3-201ENST00000297668 IPO8O15397 1037 aaKnown RBP21.35■■□□□ 1.01
CNTNAP3-201ENST00000297668 HDGFP51858 240 aaKnown RBP21.34■■□□□ 1.01
CNTNAP3-201ENST00000297668 TULP1O00294 542 aaPredicted RBP21.33■■□□□ 1.01
CNTNAP3-201ENST00000297668 RALBP1Q15311 655 aa21.33■■□□□ 1.01
CNTNAP3-201ENST00000297668 ERCC6Q03468 1493 aa21.33■■□□□ 1
CNTNAP3-201ENST00000297668 MSNP26038 577 aaKnown RBP21.33■■□□□ 1
CNTNAP3-201ENST00000297668 RAB3GAP2Q9H2M9 1393 aa21.33■■□□□ 1
CNTNAP3-201ENST00000297668 NPHP1O15259 732 aa21.31■■□□□ 1
CNTNAP3-201ENST00000297668 TCERG1O14776 1098 aaKnown RBP21.31■■□□□ 1
CNTNAP3-201ENST00000297668 CHAF1AQ13111 956 aaPredicted RBP21.31■■□□□ 1
CNTNAP3-201ENST00000297668 MPHOSPH9Q99550 1183 aa21.31■■□□□ 1
CNTNAP3-201ENST00000297668 RTF1Q92541 710 aaKnown RBP21.3■■□□□ 1
CNTNAP3-201ENST00000297668 GOLGA2Q08379 1002 aa21.29■■□□□ 1
CNTNAP3-201ENST00000297668 U2AF1L5P0DN76 240 aaPredicted RBP21.29■■□□□ 1
CNTNAP3-201ENST00000297668 U2AF1Q01081 240 aaKnown RBP eCLIP21.29■■□□□ 1
CNTNAP3-201ENST00000297668 RWDD1Q9H446 243 aaPredicted RBP21.28■■□□□ 1
CNTNAP3-201ENST00000297668 HDGFL2Q7Z4V5 671 aaPredicted RBP21.28■■□□□ 1
CNTNAP3-201ENST00000297668 GGT6Q6P531 493 aa21.27■■□□□ 1
CNTNAP3-201ENST00000297668 APBB1O00213 710 aa21.27■■□□□ 1
CNTNAP3-201ENST00000297668 ROCK2O75116 1388 aaKnown RBP21.26■□□□□ 0.99
CNTNAP3-201ENST00000297668 STK26Q9P289 416 aa21.26■□□□□ 0.99
CNTNAP3-201ENST00000297668 MLECQ14165 292 aa21.26■□□□□ 0.99
CNTNAP3-201ENST00000297668 GBP4Q96PP9 640 aa21.25■□□□□ 0.99
CNTNAP3-201ENST00000297668 NUP155O75694 1391 aa21.25■□□□□ 0.99
CNTNAP3-201ENST00000297668 CALD1Q05682 793 aaKnown RBP21.24■□□□□ 0.99
CNTNAP3-201ENST00000297668 SLKQ9H2G2 1235 aaPredicted RBP21.23■□□□□ 0.99
CNTNAP3-201ENST00000297668 ITPRIPQ8IWB1 547 aa21.23■□□□□ 0.99
CNTNAP3-201ENST00000297668 PRKCSHP14314 528 aaPredicted RBP21.23■□□□□ 0.99
CNTNAP3-201ENST00000297668 KIAA1211Q6ZU35 1233 aa21.22■□□□□ 0.99
CNTNAP3-201ENST00000297668 DRC7Q8IY82 874 aa21.21■□□□□ 0.99
CNTNAP3-201ENST00000297668 TSHZ2Q9NRE2 1034 aa21.19■□□□□ 0.98
CNTNAP3-201ENST00000297668 PTMSP20962 102 aa21.19■□□□□ 0.98
CNTNAP3-201ENST00000297668 FMN1Q68DA7 1419 aa21.19■□□□□ 0.98
CNTNAP3-201ENST00000297668 L3MBTL2Q969R5 705 aa21.18■□□□□ 0.98
CNTNAP3-201ENST00000297668 ANKRD30AQ9BXX3 1397 aa21.18■□□□□ 0.98
CNTNAP3-201ENST00000297668 PMFBP1Q8TBY8 1022 aa21.17■□□□□ 0.98
CNTNAP3-201ENST00000297668 GZF1Q9H116 711 aaPredicted RBP21.17■□□□□ 0.98
CNTNAP3-201ENST00000297668 NLRP13Q86W25 1043 aa21.16■□□□□ 0.98
CNTNAP3-201ENST00000297668 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
CNTNAP3-201ENST00000297668 CARMIL2Q6F5E8 1435 aa21.16■□□□□ 0.98
CNTNAP3-201ENST00000297668 ABCC8Q09428 1581 aa21.15■□□□□ 0.98
CNTNAP3-201ENST00000297668 EFCAB2Q5VUJ9 269 aa21.14■□□□□ 0.98
CNTNAP3-201ENST00000297668 IPO9Q96P70 1041 aaKnown RBP21.14■□□□□ 0.97
CNTNAP3-201ENST00000297668 PDE3BQ13370 1112 aa21.13■□□□□ 0.97
CNTNAP3-201ENST00000297668 SMC4Q9NTJ3 1288 aa21.12■□□□□ 0.97
CNTNAP3-201ENST00000297668 GNL2Q13823 731 aaKnown RBP21.12■□□□□ 0.97
CNTNAP3-201ENST00000297668 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.11■□□□□ 0.97
CNTNAP3-201ENST00000297668 MFAP1P55081 439 aaKnown RBP21.11■□□□□ 0.97
CNTNAP3-201ENST00000297668 KIAA2012Q0VF49 1180 aa21.11■□□□□ 0.97
CNTNAP3-201ENST00000297668 EIF3AQ14152 1382 aaKnown RBP21.1■□□□□ 0.97
CNTNAP3-201ENST00000297668 CLUAP1Q96AJ1 413 aa21.09■□□□□ 0.97
CNTNAP3-201ENST00000297668 CHMP4AQ9BY43 222 aa21.09■□□□□ 0.97
CNTNAP3-201ENST00000297668 STK31Q9BXU1 1019 aa21.09■□□□□ 0.97
CNTNAP3-201ENST00000297668 MROH2BQ7Z745 1585 aa21.08■□□□□ 0.96
CNTNAP3-201ENST00000297668 SYAP1Q96A49 352 aaPredicted RBP21.08■□□□□ 0.96
CNTNAP3-201ENST00000297668 TDRD9Q8NDG6 1382 aaKnown RBP21.07■□□□□ 0.96
CNTNAP3-201ENST00000297668 PAK3O75914 559 aaPredicted RBP21.06■□□□□ 0.96
CNTNAP3-201ENST00000297668 CENPJQ9HC77 1338 aaPredicted RBP21.06■□□□□ 0.96
CNTNAP3-201ENST00000297668 HTATSF1O43719 755 aaKnown RBP21.06■□□□□ 0.96
CNTNAP3-201ENST00000297668 TERF2IPQ9NYB0 399 aa21.06■□□□□ 0.96
CNTNAP3-201ENST00000297668 HMMRO75330 724 aa21.05■□□□□ 0.96
CNTNAP3-201ENST00000297668 CCDC146Q8IYE0 955 aa21.05■□□□□ 0.96
CNTNAP3-201ENST00000297668 SPAG9O60271 1321 aaKnown RBP21.05■□□□□ 0.96
CNTNAP3-201ENST00000297668 GOLGA6L3A6NEY3 463 aa21.04■□□□□ 0.96
CNTNAP3-201ENST00000297668 KIF3BO15066 747 aa21.04■□□□□ 0.96
CNTNAP3-201ENST00000297668 ISY1Q9ULR0 285 aaKnown RBP21.01■□□□□ 0.95
CNTNAP3-201ENST00000297668 PHLDB1Q86UU1 1377 aa21.01■□□□□ 0.95
CNTNAP3-201ENST00000297668 HDAC5Q9UQL6 1122 aa21■□□□□ 0.95
CNTNAP3-201ENST00000297668 TRIM6-TRIM34B2RNG4 842 aa21■□□□□ 0.95
CNTNAP3-201ENST00000297668 HNRNPMP52272 730 aaKnown RBP eCLIP21■□□□□ 0.95
CNTNAP3-201ENST00000297668 CSB-PGBD3P0DP91 1061 aa20.99■□□□□ 0.95
CNTNAP3-201ENST00000297668 ZNF330Q9Y3S2 320 aaPredicted RBP20.99■□□□□ 0.95
CNTNAP3-201ENST00000297668 RSPH4AQ5TD94 716 aa20.98■□□□□ 0.95
CNTNAP3-201ENST00000297668 SLC4A10Q6U841 1118 aa20.97■□□□□ 0.95
CNTNAP3-201ENST00000297668 KIF15Q9NS87 1388 aa20.97■□□□□ 0.95
CNTNAP3-201ENST00000297668 GPATCH3Q96I76 525 aa20.97■□□□□ 0.95
CNTNAP3-201ENST00000297668 TRHP20396 242 aaPredicted RBP20.96■□□□□ 0.95
CNTNAP3-201ENST00000297668 LMOD3Q0VAK6 560 aa20.96■□□□□ 0.95
CNTNAP3-201ENST00000297668 MYBBP1AQ9BQG0 1328 aaKnown RBP20.96■□□□□ 0.95
CNTNAP3-201ENST00000297668 PDS5BQ9NTI5 1447 aa20.96■□□□□ 0.95
CNTNAP3-201ENST00000297668 FHOD3Q2V2M9 1422 aa20.96■□□□□ 0.95
CNTNAP3-201ENST00000297668 GORABQ5T7V8 394 aa20.95■□□□□ 0.94
CNTNAP3-201ENST00000297668 ST20-MTHFSA0A0A6YYL1 179 aa20.95■□□□□ 0.94
CNTNAP3-201ENST00000297668 CLSTN1O94985 981 aa20.93■□□□□ 0.94
CNTNAP3-201ENST00000297668 FOXD4L1Q9NU39 408 aa20.93■□□□□ 0.94
CNTNAP3-201ENST00000297668 DHX57Q6P158 1386 aaKnown RBP20.92■□□□□ 0.94
CNTNAP3-201ENST00000297668 SMARCA2P51531 1590 aa20.91■□□□□ 0.94
CNTNAP3-201ENST00000297668 RAPGEF2Q9Y4G8 1499 aa20.91■□□□□ 0.94
CNTNAP3-201ENST00000297668 CSPP1Q1MSJ5 1256 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms